GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:44:42

Sequence gi568815588f:69032897_69271266 : 238370 bp : 44.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9904   9922   19  0  1   99   94    20 0.306   3.93
 1.02 Term +  14867  14907   41  0  2  128   43    38 0.162   0.65
 1.03 PlyA +  16023  16028    6                               1.05

 2.05 PlyA -  20503  20498    6                               1.05
 2.04 Term -  29095  28822  274  0  1   32   40   217 0.805   6.24
 2.03 Intr -  29279  29246   34  0  1   86   88    46 0.499   1.68
 2.02 Intr -  36789  36636  154  0  1   58   55    87 0.325   2.05
 2.01 Init -  38808  38767   42  0  0   57   64    52 0.358   0.12
 2.00 Prom -  41484  41445   40                              -3.16

 3.00 Prom +  50727  50766   40                              -7.46
 3.01 Init +  55265  55340   76  1  1   80  116   130 0.801  14.25
 3.02 Intr +  64188  64335  148  1  1   53   94    60 0.302   2.39
 3.03 Intr +  70975  71148  174  1  0   72  -12   162 0.024   3.65
 3.04 Intr +  77831  77975  145  2  1   -3   74   114 0.013   1.18
 3.05 Intr +  79545  79652  108  2  0   75   32    90 0.415   2.58
 3.06 Intr +  81768  81897  130  2  1   74   39    84 0.593   2.37
 3.07 Intr +  81936  82073  138  1  0  -18   18   220 0.474   4.84
 3.08 Term +  82458  82663  206  1  2   31   39   169 0.555   3.83
 3.09 PlyA +  82786  82791    6                               1.05

 4.00 Prom +  93097  93136   40                              -1.96
 4.01 Init + 100074 100151   78  2  0   69   94    71 0.297   6.86
 4.02 Intr + 122916 122991   76  2  1   73   97     5 0.317  -1.01
 4.03 Intr + 124111 124267  157  2  1   54   64   177 0.996  10.97
 4.04 Intr + 125151 125315  165  0  0  117  106   105 0.893  14.28
 4.05 Intr + 129510 129616  107  0  2   84  111    16 0.544   3.36
 4.06 Intr + 133146 133214   69  1  0   55   87    84 0.528   4.15
 4.07 Intr + 135593 135735  143  0  2   78   80    34 0.195   1.67
 4.08 Term + 138260 138373  114  1  0   86   43    22 0.166  -3.93
 4.09 PlyA + 138806 138811    6                               1.05

 5.00 Prom + 144703 144742   40                              -3.96
 5.01 Init + 147396 147666  271  2  1   57   70   218 0.221  12.03
 5.02 Intr + 153091 153168   78  2  0   77   91    75 0.261   6.22
 5.03 Intr + 166208 166301   94  0  1   90   78    78 0.954   6.02
 5.04 Intr + 167384 167603  220  2  1   76   90    40 0.723   1.30
 5.05 Intr + 169543 169623   81  0  0   61   87    63 0.906   3.33
 5.06 Intr + 169971 170147  177  2  0   84  115    24 0.855   4.82
 5.07 Intr + 174897 175045  149  2  2  109   76   119 0.997  11.83
 5.08 Term + 175704 176139  436  0  1   87   29   242 0.999  12.96
 5.09 PlyA + 176179 176184    6                               1.05

 6.00 Prom + 184341 184380   40                              -6.66
 6.01 Init + 187540 187602   63  0  0   52  116   113 0.934  11.65
 6.02 Intr + 194311 194473  163  0  1   99  117   222 0.994  25.75
 6.03 Intr + 199868 200016  149  0  2   60   67   208 0.969  15.85
 6.04 Intr + 200118 200237  120  2  0  105   94     3 0.812   3.29
 6.05 Intr + 206146 206241   96  0  0   52  100    25 0.263   0.31
 6.06 Intr + 207756 207855  100  2  1   98   18   274 0.817  21.08
 6.07 Intr + 210286 210469  184  2  1   80   74   301 0.856  26.75
 6.08 Intr + 213183 213338  156  0  0   57   74   158 0.976  10.43
 6.09 Intr + 214464 214697  234  0  0   67   70   344 0.983  27.30
 6.10 Intr + 215528 215832  305  2  2   78   80   567 0.990  51.13
 6.11 Intr + 217394 217539  146  0  2   88  107   235 0.913  25.40
 6.12 Intr + 217637 217756  120  1  0  108  116   107 0.997  16.19
 6.13 Intr + 224140 224235   96  0  0  115   24    98 0.987   6.31
 6.14 Intr + 224431 224530  100  0  1  111   96   152 0.999  17.98
 6.15 Intr + 225880 226063  184  2  1   61   57   251 0.966  18.15
 6.16 Intr + 226167 226231   65  0  2   44  103    84 0.976   3.86
 6.17 Intr + 228209 228398  190  0  1  109   55   286 0.890  26.04
 6.18 Intr + 232689 232922  234  0  0   98   70   239 0.895  19.90
 6.19 Term + 233714 233861  148  2  1   98   49   141 0.890   8.57
 6.20 PlyA + 234629 234634    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  23204  23245   42  1  0   77   98    47 0.855   5.02
S.002 Term +  70975  71224  250  1  1   72   42   170 0.959   5.98
S.003 Init +  77910  77975   66  2  0   63   74    67 0.810   3.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:69032897_69271266|GENSCAN_predicted_peptide_1|19_aa
MATPNASDSQDQPDPGTTL

>gi568815588f:69032897_69271266|GENSCAN_predicted_CDS_1|60_bp
atggccacacccaatgctagtgattctcaggaccagccagatcctgggaccaccttgtaa

>gi568815588f:69032897_69271266|GENSCAN_predicted_peptide_2|167_aa
MRENVLISTFPSPQAGETGIKATHCLGPMSPGCPNPFATLGHLRPVLVRGCQHVTSSRPG
LSDLQVLKVFGKKNKWRRSSRPSDLVGISSDLQKLLVWWAPDTWCFCCLGAAEDPEPCLS
STLTEAAKYRKYTRSKGKHALQRRPLITIVYVGSNGTEFAARVFFLS

>gi568815588f:69032897_69271266|GENSCAN_predicted_CDS_2|504_bp
atgcgagagaacgtgctgatcagtacttttccatctccacaggcaggggagacaggaatc
aaggccactcactgcctgggcccaatgtcccctggatgtcccaacccttttgctaccctg
ggccatctacgaccagttctggtgcgaggatgccagcatgtaacctccagtaggccaggg
ctgtcggatctccaggtgctaaaagtttttggcaagaaaaacaagtggaggaggagcagc
cgcccgtcagacctggtggggatcagcagtgacctgcagaagttgctggtgtggtgggca
ccggatacctggtgtttctgctgcctcggtgctgctgaggacccagagccctgcctgagc
agcacgctcacagaggcagcgaagtacaggaagtacacaaggtcaaaaggaaaacacgct
ctccagagacgtcctctgatcactatcgtgtacgttgggtcgaatggaacagaatttgct
gctagagtgtttttcctctcctaa

>gi568815588f:69032897_69271266|GENSCAN_predicted_peptide_3|374_aa
MQKLLKCSRLVLALALILVLESSVQGYPTRRARYQWVRCNPDSNSANCLEEKGPMFELLP
GESNKIPRLRTDLFPKTRIQDLNRIFPLSEDYSGSGFGSGSGSGSGSGSGFLTEMEQDYQ
LVDESDAFHDNLRKIGRLGTKQLRVKACGWTNERRQSVKMYVSNVNAHQKTSITEEALNN
QERLADGCKFLDAESQFIQGHAPFSWTAHSQRLIYVGTTEIMLRQKQIQAIFLFEFKTGL
KAAETTRNINNPFGAGIANKHESLEDEKRSGRPWEFDNDQLRAIIEADPLTTTQEVAEKL
NIDHSTAGIGPQKGPVLLHKNAQVQVVEPMLQKLNELGYEVLPHPPYLPDFLPTDYHSFK
HLGNFLQGKRFHNQ

>gi568815588f:69032897_69271266|GENSCAN_predicted_CDS_3|1125_bp
atgcagaagctactcaaatgcagtcggcttgtcctggctcttgccctcatcctggttctg
gaatcctcagttcaaggttatcctacgcggagagccaggtaccaatgggtgcgctgcaat
ccagacagtaattctgcaaactgccttgaagaaaaaggaccaatgttcgaactacttcca
ggtgaatccaacaagatcccccgtctgaggactgacctttttccaaagacgagaatccag
gacttgaatcgtatcttcccactttctgaggactactctggatcaggcttcggctccggc
tccggctctggatcaggatctgggagtggcttcctaacggaaatggaacaggattaccaa
ctagtagacgaaagtgatgctttccatgacaaccttagaaagattggaagattgggcacg
aagcagctcagggtaaaggcatgtggatggaccaatgagagaagacaaagtgtgaagatg
tacgtatcaaatgtgaatgcccaccagaaaacatccatcacagaagaggcactaaacaac
caggaaaggttggctgacggctgcaagttcttagatgcagagagccagttcatccaaggt
catgctcccttctcatggacagctcacagtcaaagactcatctatgtggggactacggaa
ataatgttaagacaaaagcaaattcaagctattttcttattcgagttcaaaacaggtctt
aaagcagcagagacaactcgcaacatcaacaacccatttggcgcaggaattgctaacaaa
catgagagccttgaagatgagaagcgtagtggccggccatgggaatttgacaatgaccaa
ttgagagcaatcattgaagctgatcctcttacaactacacaagaagttgctgaaaaactc
aacatcgaccattctacagccggcataggtccacagaaaggcccagttctgctccataag
aacgcccaagtgcaggtcgtagaaccaatgcttcaaaagttgaatgaattgggctacgaa
gttttgcctcatccgccatatttacctgacttcttgccaactgactaccactccttcaag
catctcggcaactttttgcagggaaaacgcttccacaaccagtag

>gi568815588f:69032897_69271266|GENSCAN_predicted_peptide_4|302_aa
MAEMKTEDGKVEKHYLFYDGESVSGKVNLAFKQPGKRLEHQGIRIEFVGQIELFNDKSNT
HEFVNLVKELALPGELTQSRSYDFEFMQVEKPYESYIGANVRLRYFLKVTIVRRLTDLVK
EYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIQ
HMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVN
KKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKAPEKLRKQRTNFHQRFESPESQASAEQP
EM

>gi568815588f:69032897_69271266|GENSCAN_predicted_CDS_4|909_bp
atggcagaaatgaaaactgaagatggcaaagtagaaaaacactatctcttctatgacgga
gaatccgtttcaggaaaggtaaacctagcctttaagcaacctggaaagaggctagaacac
caaggaattagaattgaatttgtaggtcaaattgaacttttcaatgacaagagtaatact
catgaatttgtaaacctagtgaaagaactagccttacctggagaactgactcagagcaga
agttatgattttgaatttatgcaagttgaaaagccatatgaatcttacatcggtgccaat
gtccgcttgaggtattttcttaaagtgacaatagtgagaagactgacagatttggtaaaa
gagtatgatcttattgttcaccagcttgccacctatcctgatgttaacaactctattaag
atggaagtgggcattgaagattgtctacatatagaatttgaatataataaatcaaagtat
catttaaaggatgtgattgttggaaaaatttacttcttattagtaagaataaaaatacaa
catatggagttacagctgatcaaaaaagagatcacaggaattggacccagtaccacaaca
gaaacagaaacaatcgccaaatatgaaataatggatggtgcaccagtaaaaggtgaatca
attccaataaggctatttttagcaggatatgacccaactccaacaatgagagatgtgaac
aaaaaattttcagtaaggtactttttgaatttagtgcttgttgatgaggaagaccggagg
tacttcaaacagcaggagataattttatggagaaaagctcctgaaaaactgaggaaacag
agaacaaactttcaccagcgatttgaatctccagaatcacaggcatctgccgaacagcct
gaaatgtga

>gi568815588f:69032897_69271266|GENSCAN_predicted_peptide_5|501_aa
MSFSRALLWARLPAGRQAGHRAAICSALRPHFGPFPGVLGQVSVLATASSSASGGSKIPN
TSLFVPLTVKPQGPSADGDVGAELTRPLDKNEVKKVLDKFYKRKEIQKLGADYGLDGTKL
AQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKGERELEPITTSQAL
QIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTAEQIEMFAYHLP
DATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPLSLRVRYVFCTAPINKKQPF
VCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSYRF
MDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGFPSGSQSRLSGTLKS
QARRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQLEKEWMTQQTEHNKE
KTESGTHPKGTRRKKKEPDSD

>gi568815588f:69032897_69271266|GENSCAN_predicted_CDS_5|1506_bp
atgtccttctcccgtgccctattgtgggctcggctcccggcggggcgccaggctggccac
cgggcagccatctgctctgcccttcgtccccactttgggccctttcccggggttctgggg
caagtttctgtccttgccaccgcctcctcctctgcctccggtggctccaaaataccaaac
acgtccttgttcgtgcccctgactgtgaaacctcagggccccagcgccgacggcgacgtc
ggggccgagctaacccggcctctggacaagaatgaagtaaagaaggtcttagacaaattt
tacaagaggaaagaaattcagaaactgggtgctgattatggacttgatgggaccaaactt
gctcaagcaaaaaagtttaatgatcccaatgacccatgcaaaatcttggttgctacagat
gcaattggcatgggacttaatttgagcataaggagaattattttttactcccttataaag
cccagtatcaatgaaaagggagagagagaactagaaccaatcacaacctctcaagccctg
cagattgctggcagagctggcagattcagctcacggtttaaagaaggagaggttacaaca
atgaatcatgaagatctcagtttattaaaggaaattttgaagaggcctgtggatcctata
agggcagctggtcttcatccaactgctgagcagattgaaatgtttgcctaccatctccct
gatgcaacactgtccaatctcattgatatttttgtagacttttcacaagttgatgggcag
tattttgtctgcaatatggatgattttaaattttctgcagagttgatccagcatattcca
ctaagtctgcgagtgaggtatgttttctgcacagctcctatcaacaagaagcagcctttt
gtgtgttcttcactgttacagtttgccaggcagtatagcaggaatgagcccctgaccttt
gcatggttacgccgatacatcaaatggcctttacttccacctaagaatattaaagacctc
atggatcttgaagctgtccacgatgtcttggatctttacttgtggctaagctaccgattt
atggatatgtttccagatgccagccttattcgagatctccagaaagaactagatggtatt
atccaagatggtgtgcacaatatcactaaattgattaaaatgtctgagacgcataagctg
ttgaatttggagggctttccatcagggagccagtcacgattgtcaggaaccttaaagagc
caagctagaaggacacgcggcaccaaagctctagggagtaaagctactgagccacccagc
cccgatgcaggagagctgtcccttgcttccagattggtgcagcaaggactcctcactcca
gacatgctgaaacagctagaaaaagagtggatgacacaacaaactgaacacaacaaagaa
aaaacagagtctgggactcatccaaaagggacgagaagaaagaagaaggaacctgattcg
gactag

>gi568815588f:69032897_69271266|GENSCAN_predicted_peptide_6|950_aa
MFAVHLMAFYFSKLKEDQIKKVDRFLYHMRLSDDTLLDIMRRFRAEMEKGLAKDTNPTAA
VKMLPTFVRAIPDGSENGEFLSLDLGGSKFRVLKVQVAEEGKRHVQMESQFYPTPNEIIR
GNGTELFEYVADCLADFMKTKDLKHKKLPLGLTFSFPCRQTKLEEGVLLSWTKKFKARGV
QDTDVVSRLTKAMRRHKDMDVDILALVNDTVGTMMTCAYDDPYCEVGVIIGTGTNACYME
DMSNIDLVEGDEGRMCINTEWGAFGDDGALEDIRTEFDRELDLGSLNPGKQLFEKMISGL
YLGELVRLILLKMAKAGLLFGGEKSSALHTKGKIETRHVAAMEKYKEGLANTREILVDLG
LEPSEADCIAVQHVCTIVSFRSANLCAAALAAILTRLRENKKVERLRTTVGMDGTLYKIH
PQYPKRLHKVVRKLVPSCDVRFLLSESGSTKGAAMVTAVASRVQAQRKQIDRVLALFQLT
REQLVDVQAKMRAELEYGLKKKSHGLATVRMLPTYVCGLPDGTEKGKFLALDLGGTNFRV
LLVKIRSGRRSVRMYNKIFAIPLEIMQGTGEELFDHIVQCIADFLDYMGLKGASLPLGFT
FSFPCRQMSIDKGTLIGWTKGFKATDCEGEDVVDMLREAIKRRNEFDLDIVAVVNDTVGT
MMTCGYEDPNCEIGLIAGTGSNMCYMEDMRNIEMVEGGEGKMCINTEWGGFGDNGCIDDI
WTRYDTEVDEGSLNPGKQSCRMSVKYPIGTKEKYDDKFATGLPQPYPSSPNRYEKMTSGM
YLGEIVRQILIDLTKQGLLFRGQISERLRTRGIFETKFLSQIESDRLALLQVRRILQQLG
LDSTCEDSIVVKEVCGAVSRRAAQLCGAGLAAIVEKRREDQGLEHLRITVGVDGTLYKLH
PHFSRILQETVKELAPRCDVTFMLSEDGSGKGAALITAVAKRLQQAQKEN

>gi568815588f:69032897_69271266|GENSCAN_predicted_CDS_6|2853_bp
atgtttgcggtccacttgatggcattttacttcagcaagctgaaggaggaccagatcaag
aaggtggacaggttcctgtatcacatgcggctctccgatgacacccttttggacatcatg
aggcggttccgggctgagatggagaagggcctggcaaaggacaccaaccccacggctgca
gtgaagatgttgcccaccttcgtcagggccattcccgatggttccgaaaatggggagttc
ctttccctggatctcggagggtccaagttccgagtgctgaaggtgcaagtcgctgaagag
gggaagcgacacgtgcagatggagagtcagttctacccaacgcccaatgaaatcatccgc
gggaacggcacagagctgtttgaatatgtagctgactgtctggcagatttcatgaagacc
aaagatttaaagcataagaaattgccccttggcctaactttttctttcccctgtcgacag
actaaactggaagagggtgtcctactttcgtggacaaaaaagtttaaggcacgaggagtt
caggacacggatgtggtgagccgtctgaccaaagccatgagaagacacaaggacatggac
gtggacatcctggccctggtcaatgacaccgtggggaccatgatgacctgtgcctatgac
gacccctactgcgaagttggtgtcatcatcggaactggcaccaatgcgtgttacatggag
gacatgagcaacattgacctggtggagggcgacgagggcaggatgtgcatcaacacagag
tggggggccttcggggacgacggggccctggaggacattcgcactgagttcgacagggag
ctggacctcggctctctcaacccaggaaagcaactgttcgagaagatgatcagtggcctg
tacctgggggagcttgtcaggcttatcttgctgaagatggccaaggctggcctcctgttt
ggtggtgagaaatcttctgctctccacactaagggcaagatcgaaacacggcacgtggct
gccatggagaagtataaagaaggccttgctaatacaagagagatcctggtggacctgggt
ctggaaccgtctgaggctgactgcattgccgtccagcatgtctgtaccatcgtctccttc
cgctcggccaatctctgtgcagcagctctggcggccatcctgacacgcctccgggagaac
aagaaggtggaacggctccggaccacagtgggcatggacggcaccctctacaagatacac
cctcagtacccaaaacgcctgcacaaggtggtgaggaaactggtcccaagctgtgatgtc
cgcttcctcctgtcagagagtggcagcaccaagggggccgccatggtgaccgcggtggcc
tcccgcgtgcaggcccagcggaagcagatcgacagggtgctggctttgttccagctgacc
cgagagcagctcgtggacgtgcaggccaagatgcgggctgagctggagtatgggctgaag
aagaagagccacgggctggccacggtcaggatgctgcccacctacgtctgcgggctgccg
gacggcacagagaaaggaaagtttctcgccctggatcttgggggaaccaacttccgggtc
ctcctggtgaagatcagaagtggacggaggtcagtgcgaatgtacaacaagatcttcgcc
atccccctggagatcatgcagggcactggtgaggagctctttgatcacattgtgcagtgc
atcgccgacttcctggactacatgggcctcaagggagcctccctacctttgggcttcaca
ttctcatttccctgcaggcagatgagcattgacaagggaacactcatagggtggaccaaa
ggtttcaaggccactgactgtgaaggggaggacgtggtggacatgctcagggaagccatc
aagaggagaaacgagtttgacctggacattgttgcagtcgtgaatgatacagtggggacc
atgatgacctgtggctatgaagatcctaattgtgagattggcctgattgcaggaacaggc
agcaacatgtgctacatggaggacatgaggaacatcgagatggtggaggggggtgaaggg
aagatgtgcatcaatacagagtggggaggatttggagacaatggctgcatagatgacatc
tggacccgatacgacacggaggtggatgaggggtccttgaatcctggcaagcagagctgt
cgaatgtcagtgaaatatcctattggaacaaaagaaaaatatgatgacaagtttgcaaca
ggtctgccccaaccttatccttcttctccaaacagatacgagaaaatgaccagtgggatg
tacttgggggagattgtgcggcagatcctgatcgacctgaccaagcagggtctcctcttc
cgagggcagatttcagagcgtctccggaccaggggcatcttcgaaaccaagttcctgtcc
cagatcgaaagcgatcggctggcccttctccaggtcaggaggattctgcagcagctgggc
ctggacagcacgtgtgaggacagcatcgtggtgaaggaggtgtgcggagccgtgtcccgg
cgggcggcccagctctgcggtgctggcctggccgctatagtggaaaaaaggagagaagac
caggggctagagcacctgaggatcactgtgggtgtggacggcaccctgtacaagctgcac
cctcacttttctagaatattgcaggaaactgtgaaggaactagcccctcgatgtgatgtg
acattcatgctgtcagaagatggcagtggaaaaggggcagcactgatcactgctgtggcc
aagaggttacagcaggcacagaaggagaactag