GENSCAN 1.0	Date run: 12-Jun-117	Time: 09:52:25

Sequence gi568815588f:67784722_68016590 : 231869 bp : 40.58% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   9200   9529  330  1  0   -8   38   280 0.060   7.07
 1.02 PlyA +   9544   9549    6                               1.05

 2.07 PlyA -  10786  10781    6                               1.05
 2.06 Term -  12489  12395   95  1  2  105   44    82 0.730   2.51
 2.05 Intr -  15876  15781   96  1  0   56   92    83 0.582   4.56
 2.04 Intr -  21066  20862  205  0  1   31  111   233 0.974  17.75
 2.03 Intr -  26942  26803  140  0  2   61   76   153 0.976  10.66
 2.02 Intr -  38671  38593   79  1  1  108   99    71 0.890   8.41
 2.01 Init -  40215  40213    3  0  0  113   22     0 0.379  -4.05
 2.00 Prom -  43571  43532   40                              -5.35

 3.00 Prom +  46531  46570   40                              -5.05
 3.01 Sngl +  49042  49194  153  0  0   93   51   164 0.511   7.25
 3.02 PlyA +  49429  49434    6                               1.05

 4.00 Prom +  51027  51066   40                              -4.55
 4.01 Init +  56613  57105  493  2  1   73   71   355 0.858  27.66
 4.02 Intr +  60270  60374  105  1  0   30  116    39 0.418   0.17
 4.03 Intr +  64744  64844  101  2  2    7   94    89 0.629   0.31
 4.04 Term +  65058  65249  192  2  0  132   44   179 0.535  14.34
 4.05 PlyA +  65403  65408    6                               1.05

 5.00 Prom +  82464  82503   40                              -4.15
 5.01 Init +  89699  90167  469  1  1   87  -48   524 0.611  34.49
 5.02 Term +  93943  93950    8  2  2   88   44     0 0.163  -7.35
 5.03 PlyA +  94269  94274    6                               1.05

 6.00 Prom +  99899  99938   40                              -7.95
 6.01 Init + 100001 100430  430  1  1   85   69   402 0.562  32.46
 6.02 Intr + 102696 102812  117  1  0  123   52   114 0.979  10.82
 6.03 Intr + 104161 104402  242  2  2  113   63   211 0.993  17.45
 6.04 Intr + 106681 106833  153  0  0   41   74   130 0.905   6.25
 6.05 Intr + 122069 122216  148  1  1   70   49   114 0.611   4.59
 6.06 Intr + 123325 123404   80  2  2   99   91    65 0.991   6.25
 6.07 Intr + 124535 124721  187  1  1   22  108   166 0.993  10.34
 6.08 Intr + 127753 128310  558  2  0  101   95   505 0.954  44.37
 6.09 Term + 131544 131872  329  1  2   87   36   448 0.998  33.39
 6.10 PlyA + 132621 132626    6                               1.05

 7.18 PlyA - 133069 133064    6                               1.05
 7.17 Term - 138418 138210  209  2  2   76   32   178 0.924   7.52
 7.16 Intr - 140466 140364  103  0  1   76   75    52 0.990   1.53
 7.15 Intr - 148059 147876  184  2  1  104   97    95 0.997  10.87
 7.14 Intr - 151514 151432   83  2  2   46  123    92 0.992   6.02
 7.13 Intr - 154933 154867   67  0  1   56  107    42 0.932   0.89
 7.12 Intr - 156384 156218  167  0  2   81   88   126 0.922   9.74
 7.11 Intr - 170017 169874  144  1  0   67   93   135 0.928  11.46
 7.10 Intr - 170409 170242  168  0  0  109   86    39 0.917   5.02
 7.09 Intr - 172255 172157   99  1  0   66   98    35 0.722   1.69
 7.08 Intr - 182081 181962  120  2  0  111   78   110 0.899  12.07
 7.07 Intr - 184729 184689   41  2  2   95   68    52 0.376   0.92
 7.06 Intr - 205679 205490  190  2  1   22   91   115 0.757   3.44
 7.05 Intr - 206294 206183  112  1  1   96   62    57 0.973   3.36
 7.04 Intr - 207602 207478  125  2  2   40   71   142 0.968   6.16
 7.03 Intr - 224136 223997  140  1  2   70   70    17 0.024  -2.64
 7.02 Intr - 226150 225968  183  2  0   28   49   151 0.840   4.04
 7.01 Intr - 229465 229305  161  0  2   66  111   116 0.657  10.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 224918 224788  131  0  2   44   39   124 0.870   0.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:67784722_68016590|GENSCAN_predicted_peptide_1|109_aa
ECPASVTRAKPEESTVLLHAVGIVINTRVKGKILARRINVCIEHIKHSKSRDSFLKRMKE
NDQKKKEANEKGSWVQLKRQPAPAGEVYFVGTNGKAPELLEPIPYEFMA

>gi568815588f:67784722_68016590|GENSCAN_predicted_CDS_1|330_bp
gaatgccccgcaagtgttaccagggcaaaaccggaagagtctacagtgttactgcatgct
gttggcattgttataaacacacgagttaagggcaagattcttgccaggagaattaatgta
tgtattgagcacattaaacactctaaaagccgagatagcttcctgaaacgcatgaaggaa
aatgatcagaaaaagaaggaagccaatgagaaaggttcctgggttcaactgaagcgccag
cctgctccagccggagaagtgtactttgtgggaaccaatgggaaggcgcctgagctgctg
gaacctattccctatgaattcatggcataa

>gi568815588f:67784722_68016590|GENSCAN_predicted_peptide_2|205_aa
MVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMSM
PFQQWEALNDSVKTSMHWVVRGKKDLMLEESDKTHTTKMENEECNEQRERKKEELASTAE
KTEQKEPKPLEKSVSPQNSDSSGIANLVAPATNIVTLPEGLLWQWSLLGSKSAGSFADVN
GWHLRFRWSKDAPSELLRKFRNYEI

>gi568815588f:67784722_68016590|GENSCAN_predicted_CDS_2|618_bp
atggttgaacaaatcctggcagaatttaaagtcagagctctggaatgtcacccagacaag
catcctgaaaaccccaaagctgtggagacttttcagaaactgcagaaggcaaaggagatt
ctgaccaatgaagagagtcgagcccgctatgaccactggcgaaggagccagatgtcgatg
ccattccagcagtgggaagctttgaatgactcagtgaagacgtcaatgcactgggttgtc
agaggtaaaaaagacctgatgctggaagaatctgacaagactcataccaccaagatggaa
aatgaggaatgtaatgagcaaagagaaagaaagaaagaggagctggcttcaaccgcagag
aaaacggagcagaaagaacccaagcccctagagaagtcagtctccccgcaaaattcagat
tcttcaggcattgccaaccttgtggctccagccacaaacattgtgactctgccagagggc
ttgctctggcaatggagcctacttggcagcaaatcagcaggcagttttgcagatgtgaat
ggttggcaccttcgtttccgctggtccaaggatgctccctcagaactcctgaggaagttc
agaaactatgaaatatga

>gi568815588f:67784722_68016590|GENSCAN_predicted_peptide_3|50_aa
MASTMVAVGLTIAAAGFAGHYVLQAMEHMEPQVKQVFQSLSKSAFSGGYY

>gi568815588f:67784722_68016590|GENSCAN_predicted_CDS_3|153_bp
atggccagtacaatggtagcagttggactgaccattgctgctgcaggatttgcaggccat
tatgttttgcaagccatggagcacatggagcctcaagtaaagcaagtttttcaaagtcta
tcaaaatctgccttcagtggtggctattactga

>gi568815588f:67784722_68016590|GENSCAN_predicted_peptide_4|296_aa
MRESLELLQDWLNGCDQNADGDMDSEVQANEVSDGNEELIENWNKGHSCYALPRNKAIWY
SCPRNLWKFELKSDDLGYLAEEISRQQSVQEVTWLLLTAYPQMQKQRNDLKLELIFKGKA
ECKSLENLQPSHVVENKNPFSGQESKQTAEQPLAKEICINEREPGIHRSTHKINEKQEKG
AKHISYHTEMEMSIACSVKGIASIARTAPQRNRKQASYFHTQGHRPPLRPPPSPRFKVLY
CRMKSAPFPSGFSKYEQRRHKTQVPETVPATIRPYFPTHGPLLPAKAGVLDTSFAL

>gi568815588f:67784722_68016590|GENSCAN_predicted_CDS_4|891_bp
atgagggaaagtttggaactcctgcaagactggttaaatggttgtgaccaaaatgctgac
ggtgatatggacagtgaagtccaggctaatgaggtctcagatggaaatgaggaacttatt
gagaactggaataaaggtcactcttgttatgccttaccaaggaacaaagctatatggtat
tcatgccctaggaatctgtggaagtttgaacttaagagtgatgacttagggtatctggca
gaagaaatttctaggcagcaaagtgttcaagaagtgacctggctgcttctaacagcctat
cctcagatgcagaagcaaagaaatgacttaaagttggaacttatatttaaagggaaagca
gaatgtaaaagtttggaaaatttgcaacctagccatgtggtagaaaacaaaaacccattt
tcagggcaagaatctaagcagactgcagagcaaccacttgctaaagagatttgcataaat
gaaagggagccaggaattcatagaagcactcacaaaataaatgaaaagcaggagaaagga
gcaaaacacataagctatcatacagagatggaaatgtccattgcgtgttcagttaaaggc
atcgcgagcatcgcgagaacggcgccacagaggaaccggaaacaagccagttactttcat
actcagggacaccgtccccccctccgccccccgccctcccctcgcttcaaagttctgtat
tgcagaatgaaatcggcgcctttccccagcggtttttccaaatacgagcaaaggaggcac
aaaacgcaggttccagaaactgtgcctgcaaccattcgtccttatttcccgacacacggg
cccctgctccccgctaaggctggggtcctggacacgagttttgcgctctga

>gi568815588f:67784722_68016590|GENSCAN_predicted_peptide_5|158_aa
MPPKFDPNKIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV
KLTIQNRQAQIEVVPSASALTIKALKEPPRDGKKQRNIKHSGNITFDEIIKVARQMRHRS
LARELSGTIKEILGTAQSVGCNVDGRHSHDIIDDINSI

>gi568815588f:67784722_68016590|GENSCAN_predicted_CDS_5|477_bp
atgccaccgaagttcgaccccaacaagatcaaagtcgtatacctgaggtgcaccggaggt
gaagtcggtgccacttctgccctggcccccaagatcggccccctgggtctgtctccaaaa
aaggttggtgatgacattgccaaggcaacgggtgactggaagggcctgaggattacagtg
aaactgacaattcagaacagacaagcccagattgaggtggtgccttctgcctccgccctg
accatcaaagccctcaaggagccaccaagagacggaaagaaacagagaaacattaaacac
agtgggaatatcacttttgatgagatcatcaaggttgctcgacagatgcggcaccgatcc
ttagccagagaactctctggaaccattaaagagatcctggggactgcccagtctgtgggc
tgtaatgttgatggccgccactctcatgacatcatagatgacatcaacagcatatag

>gi568815588f:67784722_68016590|GENSCAN_predicted_peptide_6|747_aa
MADEAALALQPGGSPSAAGADREAASSPAGEPLRKRPRRDGPGLERSPGEPGGAAPEREV
PAAARGCPGAAAAALWREAEAEAAAAGGEQEAQATAAAGEGDNGPGLQGPSREPPLADNL
YDEDDDDEGEEEEEAAAAAIGYRDNLLFGDEIITNGFHSCESDEEDRASHASSSDWTPRP
RIGPYTFVQQHLMIGTDPRTILKDLLPETIPPPELDDMTLWQIVINILSEPPKRKKRKDI
NTIEDAVKLLQECKKIIVLTGAGVSVSCGIPDFRSRDGIYARLAVDFPDLPDPQAMFDIE
YFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAGIQRII
QCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFGENLPE
QFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFDVELLG
DCDVIINELCHRLGGEYAKLCCNPVKLSEITEKPPRTQKELAYLSELPPTPLHVSEDSSS
PERTSPPDSSVIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDL
KNVGSSTGEKNERTSVAGTVRKCWPNRVAKEQISRRLDGNQYLFLPPNRYIFHGAEVYSD
SEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGAGFGTD
GDDQEAINEAISVKQEVTDMNYPSNKS

>gi568815588f:67784722_68016590|GENSCAN_predicted_CDS_6|2244_bp
atggcggacgaggcggccctcgcccttcagcccggcggctccccctcggcggcgggggcc
gacagggaggccgcgtcgtcccccgccggggagccgctccgcaagaggccgcggagagat
ggtcccggcctcgagcggagcccgggcgagcccggtggggcggccccagagcgtgaggtg
ccggcggcggccaggggctgcccgggtgcggcggcggcggcgctgtggcgggaggcggag
gcagaggcggcggcggcaggcggggagcaagaggcccaggcgactgcggcggctggggaa
ggagacaatgggccgggcctgcagggcccatctcgggagccaccgctggccgacaacttg
tacgacgaagacgacgacgacgagggcgaggaggaggaagaggcggcggcggcggcgatt
gggtaccgagataaccttctgttcggtgatgaaattatcactaatggttttcattcctgt
gaaagtgatgaggaggatagagcctcacatgcaagctctagtgactggactccaaggcca
cggataggtccatatacttttgttcagcaacatcttatgattggcacagatcctcgaaca
attcttaaagatttattgccggaaacaatacctccacctgagttggatgatatgacactg
tggcagattgttattaatatcctttcagaaccaccaaaaaggaaaaaaagaaaagatatt
aatacaattgaagatgctgtgaaattactgcaagagtgcaaaaaaattatagttctaact
ggagctggggtgtctgtttcatgtggaatacctgacttcaggtcaagggatggtatttat
gctcgccttgctgtagacttcccagatcttccagatcctcaagcgatgtttgatattgaa
tatttcagaaaagatccaagaccattcttcaagtttgcaaaggaaatatatcctggacaa
ttccagccatctctctgtcacaaattcatagccttgtcagataaggaaggaaaactactt
cgcaactatacccagaacatagacacgctggaacaggttgcgggaatccaaaggataatt
cagtgtcatggttcctttgcaacagcatcttgcctgatttgtaaatacaaagttgactgt
gaagctgtacgaggagatatttttaatcaggtagttcctcgatgtcctaggtgcccagct
gatgaaccgcttgctatcatgaaaccagagattgtgttttttggtgaaaatttaccagaa
cagtttcatagagccatgaagtatgacaaagatgaagttgacctcctcattgttattggg
tcttccctcaaagtaagaccagtagcactaattccaagttccataccccatgaagtgcct
cagatattaattaatagagaacctttgcctcatctgcattttgatgtagagcttcttgga
gactgtgatgtcataattaatgaattgtgtcataggttaggtggtgaatatgccaaactt
tgctgtaaccctgtaaagctttcagaaattactgaaaaacctccacgaacacaaaaagaa
ttggcttatttgtcagagttgccacccacacctcttcatgtttcagaagactcaagttca
ccagaaagaacttcaccaccagattcttcagtgattgtcacacttttagaccaagcagct
aagagtaatgatgatttagatgtgtctgaatcaaaaggttgtatggaagaaaaaccacag
gaagtacaaacttctaggaatgttgaaagtattgctgaacagatggaaaatccggatttg
aagaatgttggttctagtactggggagaaaaatgaaagaacttcagtggctggaacagtg
agaaaatgctggcctaatagagtggcaaaggagcagattagtaggcggcttgatggtaat
cagtatctgtttttgccaccaaatcgttacattttccatggcgctgaggtatattcagac
tctgaagatgacgtcttatcctctagttcttgtggcagtaacagtgatagtgggacatgc
cagagtccaagtttagaagaacccatggaggatgaaagtgaaattgaagaattctacaat
ggcttagaagatgagcctgatgttccagagagagctggaggagctggatttgggactgat
ggagatgatcaagaggcaattaatgaagctatatctgtgaaacaggaagtaacagacatg
aactatccatcaaacaaatcatag

>gi568815588f:67784722_68016590|GENSCAN_predicted_peptide_7|765_aa
XQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIGHLKAL
QKELEQFAKLLKQKRITLGYAQADVGLTLGVLFGNMFSQTTICLFEAQQLSFKNMFVWNQ
TLNIFEVCLYHILFIYSYISGRLGCFYLLAIVNNAAMDVGVQNCGPPDDFRCPNPTKQIW
TVNEALIQKWLSYPSGRFPVEIANNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLVVSWAPSGIYGQEAVNEKMGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGMLA
DIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILV
VRRENIVGDAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGM
FRYYEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKKLLKKKPSLD
DLKELMPDVGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNKQN
RQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNYDWKEL
EKNTEYKGEYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQST
GGGEEYLPVSHTCFNLLDLPKYTEKETLRSKLIQAIDHNEGFSLI

>gi568815588f:67784722_68016590|GENSCAN_predicted_CDS_7|2298_bp
nngcagcacacttctgcttttgttccttcatcaggacgaatttactcttttgggcttggt
ggtaatgggcagctgggaaccggttcaacaagcaacaggaaaagcccctttactgtaaaa
ggaaattggtacccctataatgggcagtgtctaccagatattggacatctcaaagctctg
cagaaagaacttgagcaatttgccaagctcctgaagcagaagaggatcaccctgggatat
gcacaggctgatgtggggcttaccctgggggttctatttgggaatatgttcagccaaacg
accatctgcctctttgaggctcaacagcttagcttcaagaacatgtttgtctggaaccaa
accctaaatatctttgaggtatgcttataccacattttgtttatctattcatatatcagt
ggacgattgggttgtttctaccttttggctattgtgaataatgctgctatggatgtaggt
gtacagaactgtgggccaccagatgacttcagatgtcccaatccgacaaagcagatctgg
acagtgaatgaagctctaattcagaaatggctgagctatccttctggaaggtttcctgtg
gagatagccaacaatgatgatcactatagaacaggtaccagattttcaggggttgatatg
aatgctgctaggcttttattccacaaacttatacaacctgatcatccgcagatatctcag
caggtggcagctagtttggaaaagaatcttattcctaaactgactagctccttacctgat
gttgaagcattgaggttttatcttactctaccagaatgtcccctgatgagtgattccaac
aatttcacaacaatagcaattccctttggtacagctcttgtgaacctagaaaaggcacca
ctgaaagtacttgttgtttcatgggcacccagtggcatctatggacaagaggctgtaaat
gagaaaatgggacagattatacagtatgataaattttatatacatgaagtacaagaattg
atagacataagaaatgattatatcaactgggtccaacagcaggcctatggaatgttggca
gatatccctgttacaatctgtacatatccatttgtatttgatgcccaagcaaaaactact
ctgttacagaccgatgcagtcttacagatgcagatggctattgatcaggcccacaggcag
aatgtctcctctctttttctcccagtgattgaatctgtgaatccctgcttaattctagtg
gtgcgtagagaaaatattgtaggagatgcaatggaagtccttaggaaaacaaagaacata
gattacaagaagccactcaaggttatatttgttggagaagatgctgtggatgcaggaggg
gtgcgcaaagaatttttcttgctcatcatgagggaattattggatcctaaatacggcatg
tttaggtattatgaagattccaggctcatttggttttctgataagacatttgaagacagt
gatttgttccatttgattggtgttatctgtggcttagcaatttataattgtaccattgtg
gacctccattttcctttggctttatataagaaactactgaaaaagaagccatccttggat
gatttgaaagaactaatgcctgatgttgggagaagcatgcaacagttactggattatcca
gaagatgacatagaggaaacattttgtcttaattttacgatcacagttgaaaactttggt
gcaacagaagtgaaagagctggttctaaatggtgcagacacagctgttaacaaacaaaat
cggcaagagtttgtcgatgcttatgtggattacatattcaataaatcagtggcttcctta
tttgatgcttttcatgcgggctttcataaggtctgtggaggaaaagtccttctgctcttt
cagcctaatgaactacaagcaatggtcattggaaatacaaattatgattggaaggaactg
gaaaagaatacagaatacaaaggggaatattgggcagaacatcctacgataaaaattttt
tgggaagtatttcacgaattaccattggaaaagaagaaacagtttctgttatttttgaca
ggtagtgatcgcattcctattcttggtatgaagagtctgaaactagtcatccagtccaca
ggaggtggtgaggagtatctcccagtttcccatacttgttttaatcttctggatcttcca
aaatatacagaaaaagaaactctacgctctaaactgatccaagctattgatcacaatgaa
ggcttcagtttaatataa