GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:44:01

Sequence gi568815588r:17049043_17301634 : 252592 bp : 39.09% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.23 PlyA -    781    776    6                               1.05
 1.22 Term -   1437   1378   60  0  0  102   48    43 0.010  -1.47
 1.21 Intr -  12607  12462  146  2  2  122   70    17 0.387   2.38
 1.20 Intr -  16596  16466  131  2  2   28   92    69 0.342   0.72
 1.19 Intr -  19238  19022  217  0  1   49  116    45 0.497   0.04
 1.18 Intr -  19728  19563  166  0  1   60   86    65 0.476   2.11
 1.17 Intr -  22562  22384  179  0  2   50   94    27 0.503  -1.78
 1.16 Intr -  22929  22785  145  0  1   97   99    85 0.977   9.43
 1.15 Intr -  35419  35229  191  2  2   99   78   199 0.348  18.38
 1.14 Intr -  36717  36555  163  0  1   96   89    -4 0.591  -0.87
 1.13 Intr -  39303  39122  182  1  2   70   84    89 0.857   5.37
 1.12 Intr -  44124  44082   43  0  1   52   78    63 0.086  -1.41
 1.11 Intr -  54195  54083  113  1  2   71   94    63 0.610   4.38
 1.10 Intr -  55563  55320  244  0  1  105   64   143 0.499   9.75
 1.09 Intr -  56533  56415  119  2  2   88   78    24 0.753   0.66
 1.08 Intr -  60693  60598   96  1  0  102   63    75 0.930   5.46
 1.07 Intr -  62008  61877  132  2  0   84   53    98 0.945   5.60
 1.06 Intr -  67752  67678   75  1  0  104   73    80 0.452   6.67
 1.05 Intr -  73599  73484  116  2  2   38   63   145 0.432   6.17
 1.04 Intr -  73856  73753  104  2  2   85   93    32 0.976   1.45
 1.03 Intr -  74647  74546  102  1  0  105  113    18 0.952   5.45
 1.02 Intr -  77757  77719   39  0  0   77   96    28 0.470   0.00
 1.01 Init -  85529  85473   57  2  0   88   45    75 0.395   4.56
 1.00 Prom -  91962  91923   40                              -5.55

 2.05 PlyA -  92122  92117    6                               1.05
 2.04 Term - 100098  99998  101  1  2  122   28   107 0.971   5.41
 2.03 Intr - 104594 104465  130  2  1   97   88    93 0.999   9.55
 2.02 Intr - 105692 105635   58  1  1   76   79    43 0.995   0.17
 2.01 Init - 108736 108399  338  1  2   54   73   278 0.564  19.70
 2.00 Prom - 110450 110411   40                              -3.05

 3.00 Prom + 113022 113061   40                              -2.75
 3.01 Init + 115052 115906  855  1  0   43   86   338 0.094  23.77
 3.02 Intr + 147745 147879  135  0  0   47   83    89 0.011   4.14
 3.03 Intr + 165948 166051  104  2  2   41  119    51 0.015   1.55
 3.04 Intr + 166487 166650  164  2  2   17   98   108 0.572   3.40
 3.05 Intr + 171220 171310   91  2  1   52   94    65 0.245   1.63
 3.06 Intr + 177945 177996   52  0  1   91   81    72 0.534   4.79
 3.07 Intr + 179327 179361   35  1  2   96   87    40 0.531   0.80
 3.08 Intr + 180257 180943  687  2  0   39   72   833 0.346  66.53
 3.09 Intr + 181608 181668   61  0  1   40   72    34 0.691  -5.18
 3.10 Intr + 184545 184640   96  2  0   83   88   142 0.999  12.99
 3.11 Intr + 184728 184889  162  2  0  123   97   277 0.998  31.35
 3.12 Intr + 185651 185776  126  1  0   72   84   260 0.980  23.96
 3.13 Intr + 186127 186347  221  0  2  104   91   373 0.732  35.38
 3.14 Intr + 204830 204943  114  2  0   47   97    49 0.030   0.34
 3.15 Intr + 216044 216156  113  2  2   86   64    55 0.121   2.00
 3.16 Intr + 219233 219368  136  0  1   -4   71   158 0.193   3.61
 3.17 Intr + 220208 220266   59  2  2   78   78    46 0.060   0.21
 3.18 Term + 226601 226686   86  0  2   65   33   154 0.099   4.44
 3.19 PlyA + 227257 227262    6                               1.05

 4.00 Prom + 231783 231822   40                              -5.75
 4.01 Sngl + 232896 233408  513  2  0   49   42   430 0.958  30.29
 4.02 PlyA + 235508 235513    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:17049043_17301634|GENSCAN_predicted_peptide_1|939_aa
MRKKEKGETMRQDRSRSQQLVDLERKFQGLQQTVDKKVCSSNPCQNGGTCLNLHDSFFCI
CPPQWKGPLCSADVNECEIYSGTPLSCQNGGTCVNTMGSYSYFYLTEEKLMSPLLSPREE
ILALTSPRNRKKAPVIGTEKTAKKLPPQQLVLGPTTGKPNPVPGGWQGNGYICEDINECE
INNGGCSVAPPVECVNTPGSSHCQACPPGYQGDGRVCTLTDICSVSNGGCHPDASCSSTL
GSLPLCTCLPGYTGNGYGPNGCVQLSNICLSHPCLNGQCIDTVSGYFCKCDSGWTGVNCT
ENINECLSNPCLNGGTCVDGVDSFSCECTRLWTGALCQVPQQGTVSISYATDAHSIAAAS
FICGESLSGINGSFSYRSPDVGYVHDVNCFWVIKTEMGKYAAPKPPDALVALNQCGGILT
GPYGSIKSPGYPGNYPPGRDCVWIVVTSPDLLVTFTFGTLSLEHHDDCNKDYLEIRDGPL
YQDPLLGKFCTTFSVPPLQTTGPFARIHFHSDSQISDQGFHITYLTSPSDLRCGGNYTDP
EGELFLPELSGPFTHTRQCVYMMKQPQGEQIQINFTHVELQCQSDSSQNYIEVRDGETLL
GKVCGNGTISHIKSITNSVWIRFKIDASVEKASFRAVYQVACGDELTGEGVIRSPFFPNV
YPGERTCRWTIHQPQSQVILLNFTVFEIGSSAHCETDYVEIGSSSILGSPENKKYCGTDI
PSFITSVYNFLYVTFVKSSSTENHGFMAKFSAEDLACGEILTESTGTIQSPGHPNVYPHG
INCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLEVYDTDSETSLGRYCGKSIPPSLTS
SGNSLMLVFVTDSDLAYEGFLINYEAISAATGQGSHLLISGWLVLFFISDPGMSSEEASS
SAKLRNDDKHAQRGLLYTKRNFHIVPAALATLIFASSAQ

>gi568815588r:17049043_17301634|GENSCAN_predicted_CDS_1|2820_bp
atgaggaagaaagagaaaggtgagaccatgcgacaggaccggagcagaagtcagcagctg
gtggatcttgagagaaaattccaaggcttgcagcagactgttgacaaaaaggtttgcagc
agcaatccttgccagaatggtggaacctgcctcaatctgcatgattcctttttttgtatc
tgtcccccacagtggaagggtcctctctgctcagctgatgttaacgaatgtgagatttac
tcaggaacacccttgagctgccagaatggaggcacatgtgttaatacaatgggaagttac
agctatttttacttaactgaagaaaagctcatgagtcctttactctcaccccgtgaagaa
atccttgctctaacatccccaaggaaccggaagaaggctcccgtgattggcacagagaaa
actgccaaaaagctgccaccccagcaattggttctggggcccaccacaggcaagccgaat
cctgtgcctggaggctggcaaggcaatggatatatttgcgaagatatcaatgaatgtgag
ataaataacggcggctgttctgtggctccacccgttgagtgtgtgaatacacctgggtct
tcccactgccaggcctgtccaccagggtaccagggtgacggaagagtgtgcacactcaca
gacatctgctcagtcagtaatggaggctgccacccagatgcctcatgctcctcaactcta
ggttccttacctctctgcacgtgtctcccgggttatactggaaatggttatgggccaaat
ggatgtgtgcagctcagtaatatttgcctaagtcacccctgtctaaatggacaatgcatc
gacactgtctctggttatttttgtaagtgtgactcaggttggacaggtgtcaactgtaca
gaaaacatcaatgagtgtttgagcaacccctgtttgaatggaggaacttgtgttgatggc
gttgattctttcagttgtgaatgcacacgtctctggactggagctctctgtcaggttcct
cagcaaggtacagtcagcatttcttatgccacggatgctcacagcatagcagcagcatcc
tttatttgtggagagtccctctcaggaataaatggaagcttcagctacaggagcccggat
gttggttatgttcatgatgttaactgcttctgggttatcaaaactgaaatgggaaagtat
gcagctccaaaaccgccagatgctttggtagccctaaatcagtgtggaggtatcctgact
ggtccttacggttctattaagtctccggggtatcctggaaactatcccccaggaagagat
tgtgtctggattgttgtaactagtcctgacctcctggtaacatttacttttgggaccttg
agcctcgagcaccatgatgactgcaacaaagattaccttgagattcgagatggtcctttg
tatcaggacccccttcttgggaagttctgcaccactttctctgtcccaccgctccagact
actggcccctttgccagaattcacttccattcagactcccagattagtgaccaaggcttc
catatcacctacttaacatcaccttcggatctgcgttgtggtgggaactacacggaccca
gagggtgaactcttcttgcctgagttgtctgggcctttcactcacaccaggcaatgcgtc
tatatgatgaagcagccccagggagaacaaatacaaatcaacttcacccacgtggagctg
caatgccagagtgacagttctcagaattacattgaggttcgagatggtgaaaccttactt
ggaaaagtctgtggcaacggaaccatctctcacattaaatccattactaatagtgtctgg
atcaggtttaaaatagatgcttctgttgaaaaagctagtttcagagctgtttatcaagtc
gcttgcggggatgaattaactggagaaggggtcattcgctcgcctttttttcctaacgtg
tatcctggagaaagaacctgtaggtggaccatccaccagccccaaagccaagtcattctc
ctcaacttcactgtctttgaaattggaagttctgcccactgtgaaacagattatgttgag
attggtagcagttccattttgggttctcctgaaaataaaaagtattgcggtacagacata
ccttcatttataacatctgtgtacaattttctttatgtcacattcgtgaaaagttcttct
actgaaaaccatggtttcatggctaagttcagtgctgaggatttggcatgtggagaaatt
cttacagaatcaacagggaccattcaaagtcctggccatccaaatgtctacccccacggt
atcaactgtacttggcatatattagtccaacctaatcacctgattcatttaatgttcgaa
acatttcatctggagtttcattacaattgcacaaacgactacttggaagtttatgacacc
gactctgagacatcccttggaagatactgtggaaagtcgatcccgccatctctcacaagc
agtggtaactcattgatgctggtgtttgtgactgactccgacctcgcttatgaaggcttc
ttaataaactatgaagcaatcagtgcagcaacagggcagggttcccacctactcatcagt
gggtggttagtgctgttttttatcagtgatcctggaatgagctcagaagaggcatctagc
agtgcaaagttaagaaatgatgacaaacatgcccaaagaggccttctttacactaaacgg
aatttccatatagttccagctgctttggcaactctaatctttgcatcatcagctcagtag

>gi568815588r:17049043_17301634|GENSCAN_predicted_peptide_2|208_aa
MEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQ
QDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG
TGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEK
ITVKQRYRLLGNSLNVHVVAKLIKILYE

>gi568815588r:17049043_17301634|GENSCAN_predicted_CDS_2|627_bp
atggagttccccaaaattgaatctgtacatccacaaaaatatgcaatggatgtagaaaat
aaaattcaagaaaagaacgttgaaccaaatattagctttgatggcagcatacagtgttct
ggaaaagatgccattctttttaagcttgaaactgcagaagaaattcacaggaaaaatcaa
caagatagtgatctctctgtgaaaatgctaaaagattttcttgaagatgacactgacgtg
aaccagtatcttttaccaccaaagtcattgctgcgatatgctcttctgttagacattgtt
cagcccacttgtagaaggtccgtgtgctttaccaaaggatatggaagctacatagaaggg
acagggtctgtgttacagactgcagaggatgtgcaggttgagaatatctacaaatccctt
accaatttgtcacaagaagaacagataacaaagctgttaatacttaaactgcgatatttc
actcctaaagaaatagcaaatctccttggatttcctccagagttcggatttcctgagaag
ataacagtgaaacagcgttatcgcctacttggaaatagtctcaacgtgcatgtagtagct
aaactaatcaaaatcttatatgaataa

>gi568815588r:17049043_17301634|GENSCAN_predicted_peptide_3|1098_aa
MNIDAKIHNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNTSKSINVIQHINRTNDKNHM
IISINAEKTFDKTQQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANIIPNGQKLEAFPLKT
GTRQGCPLSSLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLEKPIISA
QNLLKLTSNFSKVSGYKINVQKSQAFLYTNKRQTESQIMSELPFTIASKRIKYLGIQLTR
DVKDLFKKIYQSLLNDIKEDTNKWKNIPCSGIGRINIVKMATLPKCLPTTCIHMIRPQFR
VSSVRRDFNSEVAMEELKQTRKPIFLAREVRTLTSFPIFQPYGFLILRGHRQEQFTSTVV
LRITWTKGILVIQVNPWLTTLEAGISKAPDKPWNPSQVAPALPQKPAQVLGLWLAFSVNR
TWMQLETIILSKLMQEQKSKYCMLSLISGSESVSKRRIALGSALHVEGPTAHSKAMAQLS
PRQRRSRAPTTHTHRALVRLFSGSQSAPPPPPRPSPPSAAMSTRSVSSSSYRRMFGGPGT
ASRPSSSRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGVYATRSSAVRLRSSVPGVRLL
QDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKG
QGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAE
NTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQAQIQEQHVQIDVDV
SKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYR
RQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHL
REYQDLLNVKMALDIEIATYRKLLEGEESRGAIVLLQISGYYNQLRACVQKSPKRSRDST
YPSEQLLSRQTKFYDSDLRVNSSPSMDSMDLMYLILWFLEIHFIRSQKYNTAFGSVIHPL
WVYLEPFDPAELWPSLLQNEEECPLGPNGTREAQQLGRTQFPPYFDTPEITVSLQFGTCK
RLADLEDVSKASTQAHRK

>gi568815588r:17049043_17301634|GENSCAN_predicted_CDS_3|3297_bp
atgaacatcgatgcaaaaatccacaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaac
acaagcaaatcaataaatgtaatccagcatataaacagaaccaacgacaaaaaccacatg
attatctcaataaatgcagaaaagacctttgacaaaactcaacaacccttcatgctaaaa
actctcaataaattaggtattgatgggacatatctcaaaataataagagctatctatgac
aaacccacagccaatatcataccgaatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcatcacttctattcaacatagtgttggaagttctg
gccagggcaatcaggcaggagaaagaaataaagggcattcagttaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgattgtatatctagaaaaacccatcatctcggcc
caaaatctccttaagctgacaagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcttatacaccaataaaagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagg
gatgtgaaggacctcttcaagaagatctaccaatcactgctcaatgacataaaagaggat
acaaacaaatggaagaacattccatgctcagggataggaagaatcaatattgtgaaaatg
gccacattgcccaagtgtctaccaaccacctgcatccacatgataagacctcagtttaga
gttagcagtgtgaggagagacttcaattcagaggtagcaatggaagaacttaaacaaacg
aggaaacccatctttctggcaagggaggtgcgaacactcaccagtttccccattttccaa
ccctatggttttcttattctacgtggccacagacaggaacaattcactagcacagtggtt
ctcagaatcacctggacaaaaggtatactagtgattcaggtaaatccttggctgaccaca
ctggaagctggcatctccaaggctcccgacaaaccctggaacccaagccaagttgctcct
gcactaccccagaagccagctcaggtccttggcttgtggcttgctttttctgtcaacaga
acatggatgcagctggagaccatcatccttagcaaactaatgcaggaacagaaaagcaaa
tactgcatgttgtcacttataagtgggagtgagtcagtcagcaagcgtcgcattgccctg
ggatcggcactgcacgtagaaggcccgaccgcacacagcaaggcgatggcccagctgtcc
ccgcgccagagacgcagccgcgctcccaccacccacacccaccgcgccctcgttcgcctc
ttctccgggagccagtccgcgccaccgccgccgcccaggccatcgccaccctccgcagcc
atgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggcccgggcacc
gcgagccggccgagctccagccggagctacgtgactacgtccacccgcacctacagcctg
ggcagcgcgctgcgccccagcaccagccgcagcctctacgcctcgtccccgggcggcgtg
tatgccacgcgctcctctgccgtgcgcctgcggagcagcgtgcccggggtgcggctcctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctgaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaataagatcctgctggccgagctcgagcagctcaagggc
caaggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcag
gtggaccagctaaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctggccgag
gacatcatgcgcctccgggagaaattgcaggaggagatgcttcagagagaggaagccgaa
aacaccctgcaatctttcagacaggatgttgacaatgcgtctctggcacgtcttgacctt
gaacgcaaagtggaatctttgcaagaagagattgcctttttgaagaaactccacgaagag
gaaatccaggagctgcaggctcagattcaggaacagcatgtccaaatcgatgtggatgtt
tccaagcctgacctcacggctgccctgcgtgacgtacgtcagcaatatgaaagtgtggct
gccaagaacctgcaggaggcagaagaatggtacaaatccaagtttgctgacctctctgag
gctgccaaccggaacaatgacgccctgcgccaggcaaagcaggagtccactgagtaccgg
agacaggtgcagtccctcacctgtgaagtggatgcccttaaaggaaccaatgagtccctg
gaacgccagatgcgtgaaatggaagagaactttgccgttgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaatatgaaggaggaaatggctcgtcacctt
cgtgaataccaagacctgctcaatgttaagatggcccttgacattgagattgccacctac
aggaagctgctggaaggcgaggagagcagaggggccatagtgttgcttcagatctctggg
tactataatcagttgagagcctgtgttcaaaagtcccccaaaaggtctagagattccact
taccccagtgaacagttgctcagtaggcagactaaattctatgactctgatctgagggtt
aacagtagtccatctatggattctatggacttgatgtatcttatactgtggttcctggaa
attcattttatcaggagccagaaatacaacacagcttttggctctgtcattcatccactg
tgggtctacctggagccatttgatcctgctgagctgtggccttcccttttgcaaaatgaa
gaagaatgcccccttgggccaaatgggacaagagaagcccagcagcttggtaggacccag
ttcccaccttattttgatactccagaaataactgtttctctgcagtttggcacctgcaag
cggttagcagacctggaggatgtcagcaaagcctctacccaggcccacaggaagtag

>gi568815588r:17049043_17301634|GENSCAN_predicted_peptide_4|170_aa
MWNNFGNGVTGRDWNNLEGSEEERKMWESLELPKDLLNGFDQNADSDVNNEVQAEVVSDE
DEELVGNWNKGDPRYALAKRLAAFCPCTRDLWNFELDRDDLGYLTEEILKQQSIQEVTEH
KSLENLQPDNTREKKNLFSGEKFKPAAEICISNEGPNVNHQANGGDVSRA

>gi568815588r:17049043_17301634|GENSCAN_predicted_CDS_4|513_bp
atgtggaataactttggaaatggggtaacaggcagagattggaacaatttggagggctca
gaagaagaaaggaagatgtgggaaagtttggaacttcctaaagacttgttaaatggtttt
gaccaaaatgctgatagtgatgtgaacaatgaagtccaggctgaggtggtctcagatgaa
gatgaggaacttgttgggaactggaataaaggtgaccctcgctatgctttagcaaagaga
ctggcagcattttgcccctgcactagagatctgtggaactttgaacttgacagagatgac
ttagggtatctgacagaagaaattcttaaacagcaaagcattcaagaggtgacagaacat
aaaagtttggaaaatttgcagcctgacaatacaagagaaaagaaaaatctattttctggg
gagaaattcaagccagctgcagaaatttgcataagtaacgaggggccaaatgttaatcac
caagccaatgggggagatgtctccagggcataa