GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:43:48

Sequence gi568815589r:114690455_114906012 : 215558 bp : 41.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    842   1104  263  0  2   81   49   179 0.921   8.00
 1.02 PlyA +   1923   1928    6                               1.05

 2.03 PlyA -   2072   2067    6                               1.05
 2.02 Term -  10076   9816  261  2  0   99   48   177 0.432   9.34
 2.01 Init -  20664  20599   66  0  0   73   27    97 0.065   3.22
 2.00 Prom -  25451  25412   40                              -4.75

 3.10 PlyA -  25537  25532    6                               1.05
 3.09 Term -  30199  29701  499  0  1   54   38   176 0.174   2.21
 3.08 Intr -  30775  30477  299  1  2   27   53   152 0.240   0.35
 3.07 Intr -  31331  31166  166  1  1    0   64   122 0.083   0.04
 3.06 Intr -  48340  48231  110  1  2   69   71    80 0.256   2.56
 3.05 Intr -  55758  55461  298  2  1  102   36   116 0.607   3.75
 3.04 Intr -  63290  63185  106  0  1   81   95    75 0.582   5.85
 3.03 Intr -  66200  66139   62  1  2   86   72    83 0.493   3.96
 3.02 Intr -  66593  66504   90  1  0   70   46    83 0.388   0.49
 3.01 Init -  72795  72716   80  0  2   99   64    71 0.673   6.38
 3.00 Prom -  81442  81403   40                              -5.25

 4.00 Prom +  81485  81524   40                              -5.55
 4.01 Init +  86310  86414  105  2  0   98   43   109 0.440   7.67
 4.02 Intr +  90771  90935  165  2  0   33   86   137 0.501   7.24
 4.03 Term +  93881  93895   15  1  0  113   50     0 0.366  -4.04
 4.04 PlyA +  94503  94508    6                               1.05

 5.03 PlyA -  94537  94532    6                               1.05
 5.02 Term - 100452  99998  455  1  2  100   49   354 0.987  27.03
 5.01 Init - 102076 101953  124  1  1   89  115     8 0.827   3.98
 5.00 Prom - 109803 109764   40                              -3.85

 6.12 PlyA - 109944 109939    6                               1.05
 6.11 Term - 112394 112212  183  2  0   70   42   115 0.778   1.66
 6.10 Intr - 115413 115349   65  1  2  135  115    43 0.617   9.22
 6.09 Intr - 115590 115436  155  2  2   53    1   198 0.622   6.39
 6.08 Intr - 119001 118800  202  1  1   38   61   168 0.725   6.52
 6.07 Intr - 121021 120923   99  2  0   68   95    91 0.730   6.96
 6.06 Intr - 123287 123049  239  1  2   63   85    77 0.438   1.24
 6.05 Intr - 127191 127118   74  0  2   99   66    76 0.744   3.79
 6.04 Intr - 128782 128566  217  0  1   50   68   162 0.817   7.98
 6.03 Intr - 137687 137595   93  1  0   88   73    54 0.266   2.06
 6.02 Intr - 145398 144953  446  0  2   62   93   194 0.821   8.57
 6.01 Init - 149501 149406   96  2  0   97   92    79 0.545   9.56
 6.00 Prom - 154059 154020   40                              -6.55

 7.03 PlyA - 154785 154780    6                               1.05
 7.02 Term - 155200 154978  223  0  1   85   54   157 0.026   7.41
 7.01 Init - 175188 175115   74  0  2   64   58   111 0.351   6.29
 7.00 Prom - 175764 175725   40                              -7.45

 8.00 Prom + 176845 176884   40                              -8.35
 8.01 Sngl + 180265 180729  465  0  0   77   48   324 0.874  23.19
 8.02 PlyA + 181149 181154    6                               1.05

 9.00 Prom + 181458 181497   40                              -1.45
 9.01 Init + 185175 185225   51  2  0   68   99    44 0.438   4.72
 9.02 Term + 185607 185690   84  2  0  114   42    40 0.219  -1.33
 9.03 PlyA + 187721 187726    6                               1.05

10.05 PlyA - 187749 187744    6                               1.05
10.04 Term - 193019 192909  111  2  0   59   47   104 0.366   0.98
10.03 Intr - 194644 194483  162  1  0   16   27   149 0.399   0.85
10.02 Intr - 198387 198262  126  0  0  110   74    44 0.788   5.16
10.01 Init - 199679 199602   78  2  0  -11   65   101 0.508  -0.99
10.00 Prom - 200848 200809   40                              -2.15

11.03 PlyA - 201841 201836    6                               1.05
11.02 Term - 213871 213477  395  2  2   96   47   198 0.812  10.71
11.01 Intr - 215445 215374   72  1  0  102   86    28 0.712   2.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_1|87_aa
XKLHSAIICCGAKLESITLRLLGQHWKGLRFRRGGARPFLRLSPPIDGPRNSVTVQVISQ
EHLVGIPLGAVFCASLLEEKEEGAAAV

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_1|264_bp
ntgaaacttcacagtgccattatttgctgtggagcgaagctagagagcatcactctgagg
cttcttgggcagcattggaaagggcttaggttccgaagaggtggtgcccgtccctttcta
aggctctctcccccaatagatggcccaaggaacagtgttacagtgcaggtcatctctcag
gagcacttggtgggcattcctcttggtgctgtgttttgtgcttcccttttggaagagaag
gaggaaggagccgccgcagtgtag

>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_2|108_aa
MAADDLLTSYTEVLAVGIEKQMEGAHEQMGAGTREKKAGTPSHSFQQEQALYRPHGCIKA
YYNSLLALPSRMGCLQPLSPRGHVTSSVALLPHRIEQLPPANKGKGPV

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_2|327_bp
atggcagcagatgacctgttgacatcctacacagaggtcctggcagtgggaatagagaaa
cagatggagggagcacatgagcagatgggtgcaggaaccagagaaaaaaaggctggaacc
cccagccattctttccagcaggagcaggccctgtataggcctcatggctgcatcaaagca
tattacaattctcttttagctctgccatccaggatggggtgcctgcaacccctgagcccc
agagggcatgttaccagctcagtggcccttttgcctcatcgtatagagcagctgccccct
gccaacaagggcaaagggccagtgtga

>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_3|569_aa
MARKKREHKINKSDLMGVCLSFHQGNRAWCLDAGPFVEAVYGSLKGSLGIALYPVPWSSD
SKGFRSEIIGPIQCVEEENPGSHMLKMTEALSVGFPESLHGAECPWPLLLEFRKSAPRMD
AGIVWMLLTPWRSSQDQDCSPPNKWYHIWLCSSASVLLKVLPLLCTTLLSLIDMSDPAKK
HPPATQHKPPLLGCSLHLEEGLPFQILVQTSRGQGPSLCHETPNLHVCGSYPYIPEPLTQ
LSHAVSSSRVHVDIAVNTTTELLPLRGFKLSGGVDNKQANLCEQIVTDRAVSRGNRTTAI
AGRQQTYILMGGGGERTRRESSSYQNPPTKGRDEPSKWTRRMRECRAWFPKPHGGQSKVI
GLDSVRKDNKPTRLDLVSGKGKDKEMLLSQDCPEVSPSPDLLVQVTKQPCDKLATGSKTS
SQSPGAFQITWGYIPHWKWIPWHQVYKYRCHVSELLGVMPSPGARQNWVHVLPLVPVSCV
ALGKSGKLPEPPCPHPYSKVMTAPTHRLFDITEHVLGTEAGPSQVQLCCSHSQWAGSELT
ELGAASPYHGNNPNPGSLTRVIATLWAPV

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_3|1710_bp
atggcacgcaaaaagagagaacacaaaatcaacaagtcagatctcatgggcgtctgctta
tcgttccaccagggcaacagggcctggtgcttagatgcaggtccttttgtagaggcagtt
tatggttctctgaagggctctctggggattgccctctacccagtcccctggtcatcggat
tcaaaaggcttcagaagtgagataattggcccaattcaatgtgttgaagaggagaaccct
ggaagccacatgctgaagatgacagaggctctttcagtcggattccctgaatcactgcat
ggagcagagtgcccctggcccctgctgttggagtttaggaagagtgcccccaggatggat
gcaggaattgtctggatgcttctcactccatggaggagcagccaggaccaagactgctcc
ccgcccaacaagtggtaccacatctggctctgcagctctgcctctgtgcttctgaaagtg
ctgcctcttctctgcaccaccctcctctccctaattgacatgagtgacccagcaaagaag
catcctccagcgacccagcacaaacctcctctgcttgggtgctcccttcatcttgaggaa
ggcctccccttccagatattagtccagacaagcaggggccaaggtccttctctctgccat
gaaacaccaaaccttcatgtttgtggttcatatccctacatccctgagcccttgacccag
ctcagccatgctgtcagcagcagcagagtccatgtagacatcgctgtaaatacgactaca
gagttgctgcccttgcgaggctttaagcttagtgggggcgtggataacaagcaagcaaac
ctgtgtgagcagattgtgactgacagggcagtgagcaggggaaacagaacaacagccatc
gcagggaggcagcaaacttacattctaatgggaggaggaggggaaagaacaaggagagaa
tcttctagttaccaaaatccacccacaaaaggaagagatgagccatctaagtggaccagg
agaatgcgcgagtgtagagcctggtttccaaaaccccatgggggacaatcaaaagtcatt
ggattagattctgttagaaaagataataaaccaactagactagatctggtgtccgggaaa
gggaaggacaaggagatgttgctgagccaagattgcccagaagtgtctccatctcctgac
ctcttggtacaggtcaccaagcaaccctgtgacaagttggctacagggagcaaaacatcc
tcccaaagccctggagcattccagatcacatgggggtacattcctcactggaaatggatc
ccttggcatcaggtttataaatatagatgccatgtctctgagttgcttggtgtgatgcca
agtcctggagccagacagaactgggttcatgttctacctctagtccctgtaagctgtgtt
gccctgggcaagtcagggaagctccctgaaccgccatgtccccatccatacagtaaggtg
atgacagctcccacccacagactctttgacatcactgagcatgtgcttggcacagaggca
ggacccagtcaagtgcagctgtgttgctctcattctcagtgggctggttctgaactcaca
gagctgggggccgccagcccttaccatggcaacaacccgaaccctggcagcctcaccagg
gtaattgccactttgtgggcaccagtctga

>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_4|94_aa
MVEGEGEADTSSYGGAGERPRAKGEVLHTFKQPDLSKLGTIGLKGNEIHMEFIKYLSSGA
ATAELTGKSFGDGASWFPGVDAQAEEEGLWGCSM

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_4|285_bp
atggtggaaggcgaaggcgaagctgacacatcttcatatggtggagcaggagagagaccg
agagcgaagggggaggtgctacacactttcaaacaaccagatctctcaaaattggggact
attgggctgaaaggtaatgagatacacatggagttcatcaagtatctttcctccggagca
gccacagcagagcttactgggaaaagctttggtgatggtgcttcatggttccctggggta
gatgcacaggctgaagaggaggggctttggggatgttcaatgtga

>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_5|192_aa
MQLTKGRLHFSHPLSHTKHISPFVTDAPLRADGDKPRAHLTVVRQTPTQHFKNQFPALHW
EHELGLAFTKNRMNYTNKFLLIPESGDYFIYSQVTFRGMTSECSEIRQAGRPNKPDSITV
VITKVTDSYPEPTQLLMGTKSVCEVGSNWFQPIYLGAMFSLQEGDKLMVNVSDISLVDYT
KEDKTFFGAFLL

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_5|579_bp
atgcaactcacaaagggccgtcttcatttcagtcaccctttgtctcatacaaagcacatt
tctccttttgttacagatgcacctcttagagcagacggagataagccaagggcacacctg
acagttgtgagacaaactcccacacagcactttaaaaatcagttcccagctctgcactgg
gaacatgaactaggcctggccttcaccaagaaccgaatgaactataccaacaaattcctg
ctgatcccagagtcgggagactacttcatttactcccaggtcacattccgtgggatgacc
tctgagtgcagtgaaatcagacaagcaggccgaccaaacaagccagactccatcactgtg
gtcatcaccaaggtaacagacagctaccctgagccaacccagctcctcatggggaccaag
tctgtatgcgaagtaggtagcaactggttccagcccatctacctcggagccatgttctcc
ttgcaagaaggggacaagctaatggtgaacgtcagtgacatctctttggtggattacaca
aaagaagataaaaccttctttggagccttcttactatag

>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_6|622_aa
MGDRGAMSSRAAGSCQRVHTNRAHQQGSRMPWVHSGWQQVNATLGQSFQRKEQAAIVDVS
QPSLMIPPGTKNTEATRVWSRSPANHSHPTEEWPDCKKKKQTENNNIDKNDLTKTPFKGQ
QPQKSKVDKPTNMWKIQHKNAENSKSQSTSSPPHDHNTSPARAQNWAEAEMAELTEVGFK
RMGTAPTYKCGYEVDEIMYSSWHCELPTIIKIGENGNPERKSGLCLEEHLDGEEEDPANC
KLAVWNLNSKDVSVSFLLFVQGELLGQLFSNLFQGERGQSVVPWPSTDTQCLLNEELSTN
STSGSLIASPKHPASPLLKPYLLLFPHICPWTYLMAPAQDPVGVLALTPAAYTFQREQST
VPATRNLGSTSAPALPLVSPFWVCFKIEGLCHCDDGATVKLLVPHTYLLLNICEGFFRVY
ALVSKWVSQTSGCSQHSKQDDLFKVKSEPATSPPITFQRTPTPLTTTSLPIKLSEEEAKS
YLDPGGHTRSQRCLQEQQEHGRGSGTELWGNSQCGNAARARQLQAQGQEQQRTLGSHLLP
GLTTYLLVSQLRAQGEACVQFQAAIFVLFQVPGGHTMDQRKKEISNTMEKTITTTIPVTE
PHPSPIEELQMANLMPPTESPI

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_6|1869_bp
atgggtgacaggggagccatgagcagcagggcagcagggagctgccagcgagtgcacacc
aacagggcacaccaacagggtagcaggatgccatgggtacattcaggctggcaacaggtc
aatgctaccctgggacagagcttccagaggaaggaacaggctgccattgttgatgtttca
cagccttcactgatgatacctccaggtacaaaaaacactgaggcaactagggtctggagc
agatccccagcaaaccacagccaccctacagaagagtggcctgactgtaaaaagaaaaaa
caaacagaaaacaacaacatcgacaaaaatgacctcacaaaaaccccattcaaaggtcaa
caacctcaaaaatctaaggtagataagcccacaaatatgtggaagattcaacacaaaaat
gctgaaaactcaaaaagccagagtacctcttctccaccacatgaccacaacacatctcca
gcaagagcacagaactgggctgaggctgagatggctgaattgacagaagtaggcttcaaa
agaatggggacagcacctacctacaagtgtggttatgaggttgatgagataatgtattcc
agctggcattgtgaactgccaaccattataaaaataggagaaaatggaaatccagaaagg
aaaagcggcttgtgtctcgaggaacatttggatggagaggaagaagaccctgcaaattgc
aagctggctgtctggaaccttaacagtaaagatgtttctgtatccttcttgctctttgtt
cagggagagttgctggggcaactattttctaacctctttcaaggggaaagaggccagtca
gtggtgccctggccttccacagatactcagtgtctgttgaatgaagaactgagcaccaac
tccacatcaggctctctgattgccagccctaaacaccctgctagccctcttctaaagcca
tatctcctgctcttcccccacatttgcccctggacctatctcatggctcctgctcaagac
ccggtaggcgtcttggctctgacccctgctgcctacaccttccagagagaacagagcaca
gtcccagcaactaggaacctgggctcaacttcagcaccagccctgccacttgtgtcaccc
ttctgggtctgtttcaaaattgaaggtttgtgccactgtgatgacggtgctacggttaag
ctccttgttcctcatacatacctcctgttgaacatatgtgagggtttctttcgggtatat
gccttggtctccaaatgggtctcccagacttcaggctgttctcaacacagcaaacaggat
gatcttttcaaagtaaaatcagagcctgccacctctccgcccatcaccttccaaagaacc
cctactccactcaccaccacctctcttcccatcaaactcagtgaagaagaagccaagtcc
tacctggacccaggaggacacacacggagtcagaggtgcctccaggagcagcaggagcat
ggccgaggatctgggactgagctttggggaaacagccagtgtggaaatgctgccagagca
cggcagctgcaggcccaaggccaggagcagcagcgcacgctgggctctcacctgctgcct
ggactcaccacatacctgcttgtcagccagctccgggcccagggagaggcctgtgtgcag
ttccaggcagccatatttgtgctgttccaagtgccaggtggccacaccatggatcaaagg
aagaaggagatcagtaataccatggagaaaactattaccacaactataccagttactgag
cctcacccctctcccattgaagaacttcagatggcaaatcttatgccacccacagagtca
cccatctag

>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_7|98_aa
MSDGFLRSSPEGDAGAMLLVQPAEPIISIFHLWLFLQQLGLSGGHLELPDSAAAVVVVAP
WTVKGSASGRRRKRAAVHVPIVPFFVFMCTQCLAPTYE

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_7|297_bp
atgagtgacggcttcctgaggtcctcaccagaaggagatgctggtgccatgcttcttgta
cagcctgcagaaccaattatcagcatcttccatctctggctgttcctgcagcaactgggt
ctcagtggcggccatcttgaacttcctgactccgctgccgctgtggtggtggtggctccc
tggaccgtgaaaggcagtgctagtggaagaagaaggaaaagagctgccgtacatgtgcct
attgttcccttctttgtgttcatgtgtactcaatgtttagctcccacttatgaatga

>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_8|154_aa
MGRNQHKKAENSKNQNASSPPKDHNSSPARKQNWTENEFDKSTEVGFRRWIINSSKLKEC
VLTQCKEAKNLEKRLDELLTRITSLEKNLNDLMELQNTAPELREAYTSINSQIDQEEERI
SEIEDQLNEIKREDKIREKRMKGVNKASKKYGTM

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_8|465_bp
atggggagaaaccagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcct
ccaaaggatcacaactcctcgccagcaaggaaacaaaactggacagagaatgagtttgac
aaatcgacagaagtaggcttcagaaggtggataataaactcctccaagctaaaggagtgt
gttctaacccaatgcaaggaagctaagaaccttgaaaaaaggttagacgaattgctaact
agaataaccagtttagagaagaacctaaatgacctgatggagctgcaaaacacagcacca
gaacttcgtgaagcatacacaagtatcaatagccaaatcgatcaagaggaagaaaggata
tcagagattgaagatcaacttaatgaaataaagcgagaagacaagattagagaaaaaaga
atgaaaggagtgaacaaagcctccaagaaatatgggactatgtga

>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_9|44_aa
MISFDFMSHIKVTLMQEDQHHIEAAKAWGLHPLKPWSELYCGSF

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_9|135_bp
atgatctcctttgacttcatgtctcacatcaaggttacgctgatgcaagaggatcaacac
cacatagaagcagccaaggcttggggcttacaccctctgaagccatggtctgagctgtac
tgtggctccttttga

>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_10|158_aa
MFVQELEALQAAGGKASQACILPFRVHPEKLSTPRLLQGGGGVTSAIQSCFFYLLSASFS
NLKLEPGTKTPETSDQQLPGVGKVDSSMCMQTAQPKGRIKGEVTQDPGSMPTYKAKVKHK
TKPWKQGEEQPVCNFRQGVTKTKLKQLTMDTSKEFRRT

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_10|477_bp
atgtttgttcaagaacttgaagctctacaagcagctggtggcaaagccagccaggcctgc
atccttcccttcagggtgcacccagagaaactctccacaccacggctgctgcagggtggg
ggaggggtgacatcagcaattcagagctgttttttctatctcctgagtgcctctttcagc
aatttgaagttagaaccaggtactaaaacacctgaaactagtgatcagcagcttcctgga
gttgggaaagtggactcaagcatgtgcatgcagacagcccaacccaagggaagaatcaaa
ggagaagtgacgcaagaccccggaagtatgccaacatataaagccaaagttaaacataaa
accaaaccttggaaacaaggtgaagaacagcctgtatgcaacttcagacagggggttacc
aaaacaaagctgaagcagttgaccatggacacctcaaaagaatttcggagaacctga

>gi568815589r:114690455_114906012|GENSCAN_predicted_peptide_11|155_aa
XNCSEDLLCILKRAPFKKSWAYLQVAKHLNKTKLSWNKDGILHGVRYQDGNLVIQFPGLY
FIICQLQFLVQCPNNSVDLKLELLINKHIKKQALVTVCESGMQTKHVYQNLSQFLLDYLQ
VNTTISVNVDTFQYIDTSTFPLENVLSIFLYSNSD

>gi568815589r:114690455_114906012|GENSCAN_predicted_CDS_11|468_bp
ngaaattgctcagaagacctcttatgtatcctgaaaagggctccattcaagaagtcatgg
gcctacctccaagtggcaaagcatctaaacaaaaccaagttgtcttggaacaaagatggc
attctccatggagtcagatatcaggatgggaatctggtgatccaattccctggtttgtac
ttcatcatttgccaactgcagtttcttgtacaatgcccaaataattctgtcgatctgaag
ttggagcttctcatcaacaagcatatcaaaaaacaggccctggtgacagtgtgtgagtct
ggaatgcaaacgaaacacgtataccagaatctctctcaattcttgctggattacctgcag
gtcaacaccaccatatcagtcaatgtggatacattccagtacatagatacaagcaccttt
cctcttgagaatgtgttgtccatcttcttatacagtaattcagactga