GENSCAN 1.0	Date run:  7-Nov-116	Time: 20:18:08

Sequence gi568815589f:114487839_114697740 : 209902 bp : 44.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2252   2322   71  1  2   81   61    49 0.466   0.31
 1.02 Term +   3742   3904  163  1  1   12   33   259 0.879  10.21
 1.03 PlyA +   4558   4563    6                               1.05

 2.07 PlyA -   5570   5565    6                               1.05
 2.06 Term -  11022  10861  162  0  0  103   43    95 0.954   4.44
 2.05 Intr -  13244  13184   61  1  1   92   76    12 0.299  -0.86
 2.04 Intr -  15324  15269   56  0  2   31  109    67 0.649   0.88
 2.03 Intr -  17079  16346  734  1  2   44  116  1203 0.073 109.86
 2.02 Intr -  17301  17178  124  0  1  107   57    61 0.069   5.06
 2.01 Init -  38001  37951   51  0  0   77  116     6 0.354   3.46
 2.00 Prom -  49412  49373   40                              -4.96

 3.00 Prom +  53967  54006   40                              -1.66
 3.01 Init +  72474  72530   57  2  0  104  110    22 0.805   7.31
 3.02 Term +  88334  88438  105  1  0   55   45    74 0.088  -1.79
 3.03 PlyA +  90009  90014    6                               1.05

 4.00 Prom +  92854  92893   40                              -6.36
 4.01 Init + 100001 100082   82  1  1  118   87   156 0.938  19.63
 4.02 Intr + 104714 104814  101  0  2   68   40   172 0.988  10.23
 4.03 Term + 109732 109905  174  0  0   88   43   259 0.999  19.16
 4.04 PlyA + 113308 113313    6                               1.05

 5.00 Prom + 135926 135965   40                              -2.66
 5.01 Init + 136469 136621  153  1  0   34  109   149 0.735  11.58
 5.02 Intr + 139061 139168  108  1  0   76   79   114 0.927   9.78
 5.03 Intr + 140263 140412  150  0  0  107  100    89 0.917  12.36
 5.04 Intr + 145930 146040  111  0  0   79   53   132 0.566   9.38
 5.05 Intr + 149152 149232   81  0  0  102   94    72 0.972   9.03
 5.06 Intr + 150706 150888  183  0  0  110   77    20 0.859   3.08
 5.07 Intr + 155296 155471  176  0  2  118   45   142 0.449  11.64
 5.08 Intr + 170978 171112  135  2  0   45   81   112 0.005   5.88
 5.09 Term + 172303 172414  112  1  1   58   46    90 0.609  -0.17
 5.10 PlyA + 173718 173723    6                               1.05

 6.05 PlyA - 174045 174040    6                               1.05
 6.04 Term - 178908 178805  104  1  2  122   53   -10 0.514  -2.66
 6.03 Intr - 180575 180368  208  2  1   93   96    79 0.169   7.85
 6.02 Intr - 194385 194197  189  0  0   85  109    43 0.212   5.88
 6.01 Intr - 208393 208049  345  1  0  -18   65   222 0.102   4.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  16963  16346  618  1  0   74  116  1214 0.860 116.15


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:114487839_114697740|GENSCAN_predicted_peptide_1|77_aa
MPRHGPSAPALCGHLASLRCCIPGKSSPPEEYEKAERASVKGKHQDDRLFAATRKQRDLE
IMQQKEKKANEKQQEPK

>gi568815589f:114487839_114697740|GENSCAN_predicted_CDS_1|234_bp
atgccacgacacggtccatctgctccggctctgtgcggccacctcgcttccttgcgctgc
tgcatcccaggcaagagctccccaccagaagagtatgaaaaagcagagcgcgcctcggtt
aagggaaagcaccaagatgacaggctttttgccgccacccgcaagcagagggacttggag
atcatgcagcagaaggagaaaaaggcaaacgagaagcagcaggaacccaagtag

>gi568815589f:114487839_114697740|GENSCAN_predicted_peptide_2|395_aa
MTGVSTISLLVAGKPGKNVAADPAPPGLQQQSPPPPGSSSQLLCLSGTRRRLRVPRIPGS
SRRLRAPGDPAVAPVPARTAAPPTPRALRARPGLGVEMNAPLDGLSVSSSSTGSLGSAAG
AGGGGGAGLRLLSANVRQLHQALTALLSEAEREQFTHCLNAYHARRNVFDLVRTLRVLLD
SPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPATTPYRQPAWGGPDSAGPGEVRLVSL
RRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAE
AVKAAEAHDYFLLSAVQWPVSRVDGPGAVQDPFQLGQSVICLGRQAGEEGHAQGDGTGEL
KVPIGIRNQVASLLGPQPKDFVVSLLEDNASQSAY

>gi568815589f:114487839_114697740|GENSCAN_predicted_CDS_2|1188_bp
atgaccggtgttagcaccatatctctcttggtagcaggaaagccaggcaagaatgtagct
gctgaccccgcgccccccggactccagcagcagtctccgccacctccgggctccagcagc
caactcttgtgtctctcaggaacccgccgacgtctccgcgtcccccggattccaggctcc
agccgtcgtctccgcgctcccggggatccagctgtcgcgccagtacccgcgaggacagcg
gcaccgcccacaccccgcgcgctcagagcccggccgggcctcggcgtggagatgaacgcg
ccgctggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcggcggccggg
gcgggcggcggcgggggcgcggggctgcggttactgtctgccaacgtgcgccagctgcac
caagcgctgaccgcgctgctgagcgaggcggagcgggagcagttcacccactgcctgaac
gcttaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgcgtgctgctggac
agtccggtcaagcggcgcctgctgcccatgcttcgtctggtcatcccgcgctccgaccag
ctgctcttcgaccaatacacggccgagggcctctacctgcccgccaccaccccctacagg
cagcccgcctggggcggccccgacagcgcggggccaggggaggtgcgcctggtgagtttg
cggcgtgccaaggcccacgagggcttgggcttcagcatccgtgggggctcggagcacggc
gtgggcatctacgtgtctctggtggaaccaggctctctagctgagaaggaaggactgcgg
gtcggggaccagattctgcgcgtcaacgacaaatccctggcccgggtgacccacgcggag
gccgtcaaggcagcagaggcccacgactacttcctcctgagtgccgttcagtggcctgtg
tccagggtggatgggccaggagctgtccaagatcccttccagcttggacagtctgtgatt
tgcttggggaggcaggcaggcgaggagggtcatgctcaaggagatggaactggggagctt
aaggtccccattgggattaggaaccaagtggcctccttgcttggaccccagcccaaggat
tttgtagtcagcctcctggaagacaatgccagccagtccgcttactag

>gi568815589f:114487839_114697740|GENSCAN_predicted_peptide_3|53_aa
MATKRQELFVDASICRRAQLSNPPNLKPYPNVDTSSLVSYLFLILQSILSPEE

>gi568815589f:114487839_114697740|GENSCAN_predicted_CDS_3|162_bp
atggcaaccaaaagacaggaactatttgtagatgccagtatctgcagaagagctcagctc
tccaaccctcctaacctcaaaccctaccccaatgtggacacctcaagcttggttagttac
ctcttcctcattcttcagtctatattgtcacctgaagagtga

>gi568815589f:114487839_114697740|GENSCAN_predicted_peptide_4|118_aa
MASQSQGIQQLLQAEKRAAEKVSEARKRKNRRLKQAKEEAQAEIEQYRLQREKEFKAKEA
AALGSRGSCSTEVEKETQEKMTILQTYFRQNRDEVLDNLLAFVCDIRPEIHENYRING

>gi568815589f:114487839_114697740|GENSCAN_predicted_CDS_4|357_bp
atggctagtcagtctcaggggattcagcagctgctgcaggccgagaagcgggcagccgag
aaggtgtccgaggcccgcaaaagaaagaaccggaggctgaagcaggccaaagaagaagct
caggctgaaattgaacagtaccgcctgcagagggagaaagaattcaaggccaaggaagct
gcggcattgggatcccgtggcagttgcagcactgaagtggagaaggagacccaggagaag
atgaccatcctccagacatacttccggcagaacagggatgaagtcttggacaacctcttg
gcttttgtctgtgacattcggccagaaatccatgaaaactaccgcataaatggatag

>gi568815589f:114487839_114697740|GENSCAN_predicted_peptide_5|402_aa
MVITQPDEASGLLPELHNGQVLTVLRIDNTCAPISFDLGAAEEQLQTWGIQVPADQYRSL
AESALLEPQVRRYIIYNSRPMRLAFAVVFYVVVWANIYSTSQMFALGNHWAGMLLVTLAA
VSLTLTLVLVFERHQKKANTNTDLRLAAANGALLRHRVLLGVTDTVEGCQSVIQLWFVYF
DLENCVQFLSDHVQEMKTSQESLLRSRLSQLCVVMETGVSPATAEGPENLEDAPLLPGNS
CPNERPLMQTELHQLVPEAEPEEMARQLLAVFGGYYIRLLVTSQLPQAMGTRHTNSPRIP
CPCQLIEAYILGTGCCPFLASPGTATNLLCGFGLAHTEAPRICNRKSVGCVIYLSKDSPS
SDDRRLVQAGAVTGEQQGMSQQVRHHLPHPPAKLMDGFMDDL

>gi568815589f:114487839_114697740|GENSCAN_predicted_CDS_5|1209_bp
atggttatcactcagccagatgaagcttctggtctgcttccagagctccacaatggccag
gtcctcactgttctccggattgacaatacctgtgcacccatctccttcgacctgggagcc
gcagaagagcaactgcaaacttggggcatccaggtcccggctgaccagtacaggagcttg
gctgagagtgccctcttggagccccaagtgagaagatatatcatctacaactcgaggcct
atgcggctggcctttgctgtggttttctatgtggtggtgtgggccaatatctactctacc
agtcagatgtttgccttggggaaccactgggctggcatgctgctcgtgaccctggccgcg
gtgagcctgaccttgactcttgtgctggtctttgaaagacaccagaagaaggccaacacc
aacacggacctgaggctggcagctgccaatggagccctcctgagacaccgggtgctgctg
ggggtgacagacacagtggaaggatgccagagtgtgattcagctttggtttgtctacttc
gacctggagaactgtgtgcagtttttgtctgatcatgttcaagaaatgaagactagccaa
gagtccttgctgagaagcagattgagccagttgtgtgttgtcatggagactggggtgagc
cctgcaacagcggaggggcctgagaacttggaggatgctcctctcctgcccggcaattct
tgtcctaacgagaggccactcatgcagactgagcttcatcagcttgttcctgaggctgag
ccggaggaaatggcccgccagctgctggcagtgtttggcggctactacatccggcttcta
gtgacctcccagctccctcaggcaatggggacacgacacacgaactctccgagaattcca
tgcccctgccagctcatagaagcctacatcctaggcacagggtgctgcccgttcctggcg
agtcctggcactgccactaacttgctgtgtggctttgggctagcccatactgaggccccc
cgcatctgcaacaggaagtcagtgggctgcgtcatctatctttccaaggattctcccagc
tctgatgaccgaaggttggtccaagcaggtgctgtcaccggggagcagcaaggaatgtca
caacaagtaagacaccacctgcctcatccacctgccaagctgatggatggctttatggat
gacttatag

>gi568815589f:114487839_114697740|GENSCAN_predicted_peptide_6|281_aa
PNLKSVNELICKCGYGKINKKRIALTGNTLIAQSLGKYGIICTEDLIHEIYTVGKCFKQA
SNFLWPSKPSSPEGGMKKKTTHFVEGGNADNRGDQINSLLRRINEDVYHDYFSNLVLPEA
PGLVPQYTVWWPAWHRAQQNFSLLLAVVVQSKHPSPNIPWFPSSVTSQTAFCLLCQLQSL
QNIFTSVISPKPPPRDPVEFSLPDLLLQKDELDRQNPKRINAVSHLPSRTPLIQTKKSTS
SSSSEFEDLNAYASQRNFYKRNLNRYCQEHWPFQPCLTGRP

>gi568815589f:114487839_114697740|GENSCAN_predicted_CDS_6|846_bp
ccaaatctgaagtcagtaaatgaactaatctgtaagtgtggttatggcaaaatcaataag
aagcgaattgctttgacaggtaacactttgattgctcaatctcttggtaaatatggtatc
atctgcacggaagatctgattcatgagatctatactgttggaaaatgcttcaaacaagca
agtaacttcctgtggccctccaaaccatcctctccagaaggtggaatgaagaaaaagacc
acccattttgtagaaggtggaaatgctgacaacaggggggaccagatcaacagccttctt
agaagaataaatgaagatgtctaccatgattatttttctaatctggtgcttcctgaggcc
ccaggacttgtgccccagtatacagtctggtggccagcatggcatcgtgctcagcagaac
ttctccctcctcctcgctgttgtggtccagtccaaacatcccagccccaacattccctgg
ttccccagctctgtgacatcacagacagccttctgtctactctgccagctgcagagcttg
caaaacatcttcacttccgtgatctcacctaagcctcccccacgtgaccctgtggaattc
tcattgccagatttgctgcttcagaaggatgagcttgacagacaaaatcccaagcgcatt
aacgcagtctcccatttgccttcgagaacacccctgatccagacaaaaaagagcacttcc
tccagcagcagtgagtttgaggatctgaatgcatatgcttcccaaagaaatttttacaag
agaaacttaaaccgctactgccaggagcactggccattccagccatgcctcactgggagg
ccctga