GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:44:56

Sequence gi568815589r:96409673_96719378 : 309706 bp : 43.62% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    151    146    6                               1.05
 1.02 Term -   7535   7455   81  2  0   48   45    70 0.735  -3.61
 1.01 Init -   8360   7941  420  2  0   67  105   737 0.907  69.69
 1.00 Prom -  18137  18098   40                              -3.76

 2.00 Prom +  22439  22478   40                              -3.86
 2.01 Init +  40608  40956  349  2  1   92   75   649 0.977  59.35
 2.02 Intr +  48707  48869  163  0  1   84   53   128 0.899   7.93
 2.03 Intr +  55665  55826  162  0  0   90  101    27 0.751   3.29
 2.04 Intr +  56038  56106   69  1  0   92   96    26 0.656   2.10
 2.05 Intr +  74790  74961  172  0  1   59   69   175 0.417  12.65
 2.06 Intr +  78327  78602  276  2  0   61   66   122 0.652   5.01
 2.07 Intr +  79146  79315  170  2  2  106   36   128 0.418   8.14
 2.08 Intr +  82079  82229  151  2  1   52   19   107 0.130   0.36
 2.09 Intr +  83348  83459  112  1  1   70   49    34 0.039  -2.35
 2.10 Intr +  86985  87199  215  1  2   28   46   186 0.568   6.83
 2.11 Term +  94684  94887  204  0  0  114   40   119 0.818   7.07
 2.12 PlyA +  96857  96862    6                               1.05

 3.15 PlyA -  97745  97740    6                               1.05
 3.14 Term -  99177  98916  262  2  1   96   37    50 0.211  -4.30
 3.13 Intr - 100117 100001  117  0  0   72  100    21 0.205   1.28
 3.12 Intr - 103928 103847   82  0  1   70   92   120 0.494   9.30
 3.11 Intr - 105405 105398    8  2  2  126   98     0 0.413  -1.82
 3.10 Intr - 112931 112834   98  2  2   49   94    66 0.367   2.11
 3.09 Intr - 113748 113589  160  2  1   39   46    83 0.444  -0.81
 3.08 Intr - 114053 113915  139  0  1   90   95    99 0.641  10.32
 3.07 Intr - 124441 124255  187  1  1   17   95   224 0.365  15.26
 3.06 Intr - 129468 129406   63  0  0   59  100    53 0.372   2.51
 3.05 Intr - 168884 168796   89  0  2   63   48    91 0.022   2.29
 3.04 Intr - 201413 201387   27  0  0  113   61    37 0.034   1.59
 3.03 Intr - 208968 208823  146  2  2  105   68   101 0.866   9.73
 3.02 Intr - 209297 209174  124  0  1   74   16    25 0.404  -6.46
 3.01 Init - 209706 209547  160  0  1   79  105   297 0.993  28.49
 3.00 Prom - 212030 211991   40                              -2.86

 4.07 PlyA - 215441 215436    6                               1.05
 4.06 Term - 232214 232087  128  0  2  143   38   -11 0.282  -2.16
 4.05 Intr - 236316 236221   96  1  0   35  115    27 0.199   0.08
 4.04 Intr - 241823 241718  106  2  1   98  110    64 0.985   9.39
 4.03 Intr - 242040 241987   54  0  0   93   84    30 0.828   2.28
 4.02 Intr - 245101 245033   69  1  0  100   89    32 0.934   3.88
 4.01 Init - 245609 245418  192  2  0   95   88   506 0.999  48.27
 4.00 Prom - 258380 258341   40                              -3.16

 5.00 Prom + 268121 268160   40                              -2.46
 5.01 Init + 269313 269416  104  2  2   94   54    59 0.224   2.81
 5.02 Intr + 277526 277694  169  2  1   45   49    83 0.224   0.05
 5.03 Intr + 289769 289970  202  1  1   70  107    20 0.074   0.96
 5.04 Term + 291511 291650  140  2  2   18   55   123 0.395   0.13
 5.05 PlyA + 292569 292574    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 150012 150077   66  2  0   73  106    35 0.898   4.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:96409673_96719378|GENSCAN_predicted_peptide_1|166_aa
MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTS
PGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAPPPAASASA
AASGGEDEEEASSPDSGHLKIALALLKDALQRQPKSKKGLLGLFCG

>gi568815589r:96409673_96719378|GENSCAN_predicted_CDS_1|501_bp
atgatccggggcttcgaggcgcccatggcggagaacccgccgccgccgccgccgcccgtc
atcttctgccacgactccccgaagcgggtgctggtgtcggtcatcaggacgaccccgatc
aagccaacgtgcggcggtggaggggagccggagccgccgccgccgctcatccccaccagc
cccggcttcagcgacttcatggtgtacccgtggcgctggggcgagaacgcacacaacgtg
acgctcagccctggggccgcgggggccgccgcctcggccgccctgcctgcagccgcagcc
gccgagcactcggggcttcgtggccggggcgcgcccccgcccgccgcctcggcctccgcc
gccgcctcgggaggtgaggacgaggaggaagcgagcagcccagacagcggccacctcaag
atcgccctcgccctgttaaaagatgccctgcagagacagccgaagagcaagaaaggactt
ctgggcctgttctgcggctga

>gi568815589r:96409673_96719378|GENSCAN_predicted_peptide_2|680_aa
MKGALGSPVAAAGAAMQESFGCVVANRFHQLLDDESDPFDILREAERRRQQQLQRKRRDE
AAAAAGAGPRGGRSPAGASGHRAGAGGRRESQKERKSLPAPVAQRPDSPGGGLQAPGQKR
TPRRGEQQGWNDSRGPEGMLERAERRSYREYRPYETERQADFTAEKFPDEKPGDRFDRDR
PLRGRGGPRGGMRGRGRGGPGNRVFDAFDQRGKREFERYGGNDKIAVRTEDNMGGCGVRT
WGSGKDTRVPELEVEEETQVQEMTLDEWKNLQEQTRPKPEFNIRKPESTVPSKAVVIHKS
KYRDDLLCSTLQPLSQMSVGMAVDLCVFDAVIVFQMVKDDYEDDSHVFRKPANDITSQLE
INFGNLPRPGRGARGGTRGGRGRIRRAENYGPRAEVVVSLITSPRPIKVSEQRSFFSLKP
DLRVRLYSHWCGYRSAAAFAHYRFTQCHAVPGMYCKNTDSSYPIELLSHVVEDSFGEPGA
RSEPVMGYVCLPGLALADLVVCLDTSDHFLLLISKSMPFQHMGASREGDCCPLKLYCAVL
AGAGKGDPAGSTAQATLKSPLEEVQRTRSRGARPAPSLREAPSSSSFLCPPAREHRGGFS
VLCTAQDKRHWKRFTTLHFQVSNNFQKANKTKIRVRKTTSNLEGSSPDAAAAALFKEKRL
NRSFRFQRSQQSTESKIQTS

>gi568815589r:96409673_96719378|GENSCAN_predicted_CDS_2|2043_bp
atgaagggcgctctggggagtcccgtggctgccgctggcgccgcgatgcaggagagtttc
ggctgcgtggtggccaaccgcttccatcagctgctggacgacgagtcggacccgttcgac
atcctgcgcgaggccgagcgccggcgccagcagcagctgcagcgcaagaggcgcgacgag
gcggcggcggcggccggggccggtccccgcggcggcaggagcccagccggggcctcgggc
cacagagccggcgcgggcggccggagggagtcgcagaaggagcgcaagagcctcccggcg
cccgtcgctcagcggcccgatagccccgggggcggcctgcaggcgccgggccagaagcgg
actcctagaagaggggagcagcaaggatggaatgacagccgtgggccggaggggatgctc
gaaagagctgagcggagatcctacagggaataccgaccctatgagacagagaggcaggca
gacttcacagctgagaagtttccagatgaaaaaccaggtgataggtttgatcgagacaga
ccgttgagaggacgtggaggcccgagagggggtatgcgcggcagaggcagaggtggccct
gggaacagagtttttgacgcttttgaccagagaggaaagcgagaatttgaaagatatggt
gggaatgacaaaatagcagtcagaactgaagacaacatgggtggatgtggagttcgaacc
tggggatcgggtaaagataccagagttcctgagttggaggtagaagaagaaacccaagtt
caagagatgactttagatgagtggaaaaatcttcaagaacagaccagaccaaagcctgag
tttaacatccggaaaccagaatccactgttccttccaaagccgtggtgattcacaagtca
aaatacagagatgatctcctgtgtagcacactgcagccactaagccagatgagtgtgggg
atggctgtggacttgtgcgtgtttgatgctgtaattgtgtttcagatggtaaaagatgac
tatgaggacgattcccatgttttccggaaacccgccaatgacatcacatcccagctggag
attaattttggtaacctccctcgtcctgggcgtggagccagaggaggcacccggggaggc
cggggaaggatcaggagggcagagaactatggacccagagcagaagtggtggtttctttg
atcacatctcctagaccgatcaaggtctcggagcaaaggagtttcttttcattgaagcct
gatctccgtgtgcggctgtattctcactggtgtggctatcggtcagcggctgcttttgct
cattaccggtttacgcagtgccacgcagtgcctggcatgtattgcaaaaacactgacagt
tcctatcccatagagctgttgagtcatgtggttgaagacagttttggggaacccggtgca
cgttctgaacctgtaatgggctatgtttgcttaccagggctagctctcgctgacttggtc
gtgtgcctggatacttcagaccatttccttctgttgatcagcaagtccatgccattccag
cacatgggagcttcacgggaaggagactgctgtcctctgaaactgtactgtgcggtgctg
gcaggcgcaggcaagggagaccccgctggctccaccgcccaggccaccctgaagtccccg
ctggaggaggtgcagcggacccgctcccggggagcccgtcccgcgccctccctccgagaa
gccccttcctccagctccttcctctgcccgccggcccgagagcaccgaggcggcttctct
gtcctgtgtactgcccaggacaagcggcattggaagcgattcacgacgctacactttcag
gtcagtaacaactttcagaaagcaaacaaaaccaaaataagagtcagaaaaaccacttcc
aatctggagggctcctcgcccgatgctgctgctgctgcgctcttcaaggagaagcgtttg
aatcgatcatttcgttttcagagatcccaacagagcactgagtcaaagatccagaccagc
tag

>gi568815589r:96409673_96719378|GENSCAN_predicted_peptide_3|553_aa
MKRKSERRSSWAAAPPCSRRCSSTSPGVKKIRSSTQQDPRRRDPQDDVYLDITARWTEGH
LSKLRASARRLEPAAPPRGLLLSSCGFRLQGLRARAPPERLRLPGSAPRRGLEKEGVTLV
AFEPAGKTNVRVVTFEKSQPARAAFHGYCSNKDWIFGMNTTEGEVPFYHILSEVHEIHTT
SRAMQYGFLNFNSFNLDEYEHYENHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGST
PTDAIVKEFLDICENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPG
SVIGPQQQFLVMKQTNLWLEGDYFRQKLKGQENGQHRAAFSKLLSGVDDISINGVENQDQ
QEPEPYSDDDEINGVTQGDRLRALKSRRQSKTNAIPLTEYNFTISEISEYRGSKDAAEKK
VNWNIGKRVILQSSVQSCKTSEPNISGSAGITKRTTRSASRKSSVKSFPAMYIRGFGPRG
LISVKLVPSAKQPVSQETLAELGVLCALPFEDSFSSAMSPLHCFVQPYCTLNTRMGMQQC
PGIRIGGLSGTDS

>gi568815589r:96409673_96719378|GENSCAN_predicted_CDS_3|1662_bp
atgaagcggaaaagcgagcggcggtcgagctgggccgccgcgcccccctgctcgcggcgc
tgctcgtcgacctcgccgggtgtgaagaagatccgcagctccacgcagcaagacccgcgc
cgccgggacccccaggacgacgtgtacctggacatcaccgcaagatggaccgagggtcac
ctttctaagttgcgggcgtcagcccggcgcctcgaacctgcagctcctccccgcgggctg
cttctgagttcctgtggattccgccttcagggattgcgagcccgcgcgccccccgaacgc
ctccgcctcccggggtccgctccccgccggggcctcgagaaggaaggtgtcacgttggtg
gcattcgagccagccggcaagacgaatgtccgggttgtcacttttgagaaatcccagcca
gccagagcagcttttcatggatactgctccaacaaagactggatttttggcatgaatacc
acagaaggtgaagtgcccttctatcacatcttgtcagaggtacatgaaatccacacgaca
tcacgggcaatgcagtatggcttccttaatttcaactcatttaaccttgatgaatatgaa
cactatgaaaatcacaatgttactaccattattcgtctgaataaaaggatgtatgatgcc
aaacgctttacggatgctggcttcgatcaccatgatcttttctttgcggatggcagcacc
cctactgatgccattgtcaaagaattcctagatatctgtgaaaatgctgagggtgccatt
gcagtacattgcaaagctggccttggtcgcacgggcactctgatagcctgctacatcatg
aagcattacaggatgacagcagccgagaccattgcgtgggtcaggatctgcagacctggc
tcggtgattgggcctcagcagcagtttttggtgatgaagcaaaccaacctctggctggaa
ggggactattttcgtcagaagttaaaggggcaggagaatggacaacacagagcagccttc
tccaaacttctctctggcgttgatgacatttccataaatggggtcgagaatcaagatcag
caagaacccgaaccgtacagtgatgatgacgaaatcaatggagtgacacaaggtgataga
cttcgggccttgaaaagcagaagacaatccaaaacaaacgctattcctctcacggaatac
aatttcactatatctgaaatctcagagtaccgaggctccaaggatgctgcagagaagaag
gtgaactggaatataggcaagagagtaattcttcaatccagtgttcagagctgtaaaaca
tctgaacctaacatttctggcagtgcaggcattactaaaagaaccaccagatctgcttca
aggaaaagcagtgttaaaagcttccctgccatgtatatccgaggctttgggcctaggggc
cttatcagtgtgaaattagtccccagtgcaaagcagccagtctcccaagagaccttggca
gagctgggagttctgtgtgctttgccttttgaagactcattcagctctgccatgtctcct
ctacactgttttgtacaaccttactgcacacttaacactcgcatggggatgcagcagtgc
cccggcataaggattggaggactgtcaggcactgactcatga

>gi568815589r:96409673_96719378|GENSCAN_predicted_peptide_4|214_aa
MAAPAPVTRQVSGAAALVPAPSGPDSGQPLAAAVAELPVLDARGQRVPFGALFRERRAVV
VFVRHFLCYICKEYVEDLAKIPRSFLQEANVTLIVIGQSSYHHIEPFCKLTGYSHEIYVD
PEREIYKRLGMKRGEEIASSGSLQSLWRAVTGPLFDFQGDPAQQGGTLILGPGNNIHFIH
RDRNRLDHKPINSVLQLVGVQHVNFTNRPSVIHV

>gi568815589r:96409673_96719378|GENSCAN_predicted_CDS_4|645_bp
atggccgcgccggccccggtcacgcggcaggttagcggcgccgccgccctggtcccggcc
ccgagcggccccgacagcgggcagcccctggcggccgccgtggccgagctgccggtgctg
gacgcccgcgggcagcgggtaccgttcggcgcgctgttccgggagcgccgcgccgtggtg
gtgttcgtgcggcatttcctgtgttacatctgcaaggaatacgtagaggatctggccaaa
atccccaggagtttcttacaagaagcaaatgtcacccttatagtgattggacagtcatcc
taccatcatattgagcctttttgcaagctgactggatattctcatgaaatctatgtcgat
cctgagagagaaatttataaaagattgggaatgaaaagaggtgaagaaattgcttcctca
ggaagccttcagagcctgtggcgggcagtgactggccctctctttgattttcaaggagac
ccagctcagcaaggtggaaccctcattttaggtccaggtaacaacatccattttatacac
cgcgataggaataggttggatcacaaacctatcaactctgttttacagcttgtaggagtt
cagcatgtgaactttacaaacagaccttcagttatccatgtgtga

>gi568815589r:96409673_96719378|GENSCAN_predicted_peptide_5|204_aa
MDLNGHFSKEDLQMAYEHYLKSLIIREIPIECTMRTVRPLGRGESPTADVWVCECQLSGA
SRTRHTQRGFEEGSAFQVERFLGSENGKFSKCWDYRHEPLCPAHNLSEEDIGENHDIGCA
CDFLDMTGKTQQQQQQKIDKNFCASKDTVNRKMATQAGAGLTGCSECECGAHQVPAHPEL
QLARKRCTQPRFPLVPLPPHLPAS

>gi568815589r:96409673_96719378|GENSCAN_predicted_CDS_5|615_bp
atggatcttaatggacatttctccaaagaagatctacaaatggcctatgagcactactta
aaatcattaatcattagggaaatccctattgaatgcacaatgaggaccgtccgcccgctc
ggaagaggcgaatctcccacggcagacgtctgggtgtgcgaatgccagttgagcggggcc
tcgaggacgcgtcacacacagcgaggatttgaggagggaagcgccttccaggtagaacgg
tttctgggttcagagaacggaaagttcagtaaatgctgggattataggcatgagccactg
tgcccggcccataatctctctgaagaagacataggggaaaatcatgacattggatgtgcc
tgtgatttcttggatatgacaggaaaaacacaacaacaacaacaacaaaaaatagacaaa
aacttttgtgcatcaaaggatactgtcaacaggaaaatggcaacccaggcaggagcaggg
ctgactggctgctccgagtgcgagtgcggggcccaccaagtccccgcccacccggaactg
cagctggcccgcaagcgctgcacacagccccggttcccgctcgtgcctctccctccacac
ctccctgcaagctga