GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:43:19

Sequence gi568815589f:68935783_69172759 : 236977 bp : 43.91% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4864   5008  145  2  1   90   90    41 0.010   3.84
 1.02 Intr +  10261  10359   99  1  0   83   82    84 0.059   6.53
 1.03 Intr +  55358  55475  118  2  1   91   83    89 0.171   9.17
 1.04 Term +  64488  64520   33  2  0  100   38    33 0.108  -2.91
 1.05 PlyA +  65707  65712    6                               1.05

 2.02 PlyA -  66839  66834    6                               1.05
 2.01 Sngl -  78310  77255 1056  1  0  103   50  2050 0.999 199.86
 2.00 Prom -  82230  82191   40                              -3.56

 3.04 PlyA -  82704  82699    6                               1.05
 3.03 Term -  89011  88840  172  0  1  108   48   164 0.877  11.70
 3.02 Intr -  89636  89537  100  0  1   38   92    26 0.426  -2.83
 3.01 Init -  95849  95834   16  2  1   97   91    14 0.576   2.95
 3.00 Prom -  95907  95868   40                              -9.16

 4.00 Prom +  98763  98802   40                              -4.86
 4.01 Init + 100001 100165  165  1  0   68   92   260 0.997  22.03
 4.02 Intr + 100849 100884   36  0  0   90   50    52 0.010   0.06
 4.03 Intr + 110603 110700   98  1  2   68   90    26 0.251  -0.39
 4.04 Intr + 117358 117478  121  1  1   76   34   162 0.955  10.10
 4.05 Intr + 129156 129261  106  2  1   65   77    58 0.938   2.19
 4.06 Term + 131470 131885  416  2  2   89   47   269 0.937  18.32
 4.07 PlyA + 132516 132521    6                              -3.24

 5.00 Prom + 132834 132873   40                              -4.56
 5.01 Init + 134656 134687   32  0  2  103   97     5 0.704   2.33
 5.02 Term + 136830 136980  151  0  1   80   44   209 0.997  13.08
 5.03 PlyA + 138811 138816    6                               1.05

 6.06 PlyA - 141638 141633    6                               1.05
 6.05 Term - 172418 172136  283  1  1   13   55   248 0.962   8.90
 6.04 Intr - 185084 185012   73  0  1   87   66    82 0.679   4.36
 6.03 Intr - 194948 194753  196  2  1   89   43   116 0.668   6.19
 6.02 Intr - 198380 198251  130  1  1   44   53   122 0.125   5.00
 6.01 Intr - 236772 236737   36  2  0  127  100    14 0.167   3.88

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 100849 100890   42  0  0   90   55    79 0.976   1.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:68935783_69172759|GENSCAN_predicted_peptide_1|131_aa
XLGSRHRPDLVPSTPSLFEAASLATTISSSSLYVNEHYPHDRPTLYSNRWTPNHYVIIEK
RLLLDMFLLGLENPISSVDTASKGLPSSSTFTLEEGTIYLTAEPNTLEVQDDNASVLDVY
LVLAYSHGTPR

>gi568815589f:68935783_69172759|GENSCAN_predicted_CDS_1|396_bp
nccctgggatcccgacacaggccagacctggtccctagcactccatcactgtttgaagct
gcttccttggcaaccacaatttcatcttcttccttatacgtcaatgagcactatccacac
gacaggcctacactctattcaaacaggtggactccaaatcactacgtaatcatcgagaaa
agacttttattagatatgttcctgctgggtttagaaaatcctatatcttctgttgataca
gcaagcaaagggttaccttccagttcaacatttaccttggaagaggggaccatctacttg
accgctgagcccaacactctggaagtgcaggatgacaatgcttctgtgcttgacgtctat
ttagtcctcgcctacagccatggaactcccaggtga

>gi568815589f:68935783_69172759|GENSCAN_predicted_peptide_2|351_aa
MGNAPAKKDTEQEESVNEFLAKARGDFLYRWGNPAQNTASSDQFERLRTLGMGSFGRVML
VRHQETGGHYAMKILNKQKVVKMKQVEHILNEKRILQAIDFPFLVKLQFSFKDNSYLYLV
MEYVPGGEMFSRLQRVGRFSEPHACFYAAQVVLAVQYLHSLDLIHRDLKPENLLIDQQGY
LQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAVGFPPFY
ADQPIQIYEKIVSGRVRFPSKLSSDLKHLLRSLLQVDLTKRFGNLRNGVGDIKNHKWFAT
TSWIAIYEKKVEAPFIPKYTGPGDASNFDDYEEEELRISINEKCAKEFSEF

>gi568815589f:68935783_69172759|GENSCAN_predicted_CDS_2|1056_bp
atgggcaacgcccccgccaagaaggacaccgagcaggaggagagcgtgaacgagttccta
gccaaagccagaggagatttcctctacagatggggaaaccccgctcaaaacaccgccagc
tcggatcagttcgaacggctcaggacgctgggcatgggctccttcgggcgggtgatgctg
gtgaggcaccaggagaccggcggccactacgccatgaagatcctcaacaagcagaaggtg
gtgaagatgaagcaggtcgagcacatactgaacgagaagcgcatcctgcaggcgatcgac
tttccgttcctcgtcaagctccagttctcctttaaggacaactcctacctgtacctggtg
atggagtacgtgccgggtggggagatgttctcccgcctacagcgcgtcggaaggtttagc
gagccccatgcctgtttctatgccgcccaggtcgtcctggccgtccagtacctacactcg
ctcgacctcatccaccgcgacctgaagcccgagaatctcctcatcgaccagcagggctac
ctgcaggtgacggacttcggtttcgccaagcgcgtgaagggccgcacttggaccttgtgc
gggaccccagagtacctggcccccgagatcatcctgagcaaaggctacaacaaggccgtg
gactggtgggccctaggggtgctcatctatgagatggccgtgggcttcccacccttctac
gccgaccagcccatccagatctacgagaagatcgtctctgggagggtgcggtttccctcc
aaactcagctctgacctcaagcatctgctgcggagcctgctgcaggtggacctcaccaag
cgcttcggaaacctcaggaacggggttggcgacatcaagaaccacaagtggttcgccaca
accagctggatcgccatctatgagaagaaggtggaagctcccttcatcccgaagtacaca
ggccctggggatgccagtaactttgacgactacgaggaggaagagctccggatctccatc
aatgagaagtgtgccaaggagttttctgagttttag

>gi568815589f:68935783_69172759|GENSCAN_predicted_peptide_3|95_aa
MEQKQGTVLGADYTAVNKTGKHPLLLMFYCRDTDDNKIRSLAMWELVAMLSESMERPLVR
TSSTQPKASKDVRLASNHMSELEVGPLASDDCSSD

>gi568815589f:68935783_69172759|GENSCAN_predicted_CDS_3|288_bp
atggagcagaaacaaggcactgttctaggtgccgattatacagcagtgaacaagacaggc
aaacatcccttgcttcttatgttctattgtagggacactgatgataacaaaataagatca
cttgctatgtgggagctggttgccatgctgtcagaatctatggagaggcccctggtgagg
acctccagtacacagcccaaagccagcaaggacgtgaggcttgccagcaaccacatgagt
gagctggaagtgggtcctcttgcctcagatgactgcagctctgactga

>gi568815589f:68935783_69172759|GENSCAN_predicted_peptide_4|313_aa
MWTLGRRAVAGLLASPSPAQAQTLTRVPRPAELAPLCGRRGLRTDIDATCTPRRAGEDKG
DAHFADLSSNQRGLNQIWNVKKQSVYLMNLRKSGTLGHPGSLDETTYERLAEETLDSLAE
FFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQIWLSSPSRYVDCGVP
GEQDPGRSAPVFLEGAGRSAGAPCSCTCEGTGFRGKIPQFRAVVIVFIPVANGMTRHTVM
SGETPVEEQEVVDMLWPGQWLPSSWSLHPPNLAKEVPILSVEKISRSCCVNIKASKQQQQ
QQKHEIINNKDHP

>gi568815589f:68935783_69172759|GENSCAN_predicted_CDS_4|942_bp
atgtggactctcgggcgccgcgcagtagccggcctcctggcgtcacccagcccagcccag
gcccagaccctcacccgggtcccgcggccggcagagttggccccactctgcggccgccgt
ggcctgcgcaccgacatcgatgcgacctgcacgccccgccgcgcaggagaagataaaggt
gacgcccattttgcggacctgagttcgaaccaacgtggcctcaaccagatttggaatgtc
aaaaagcagagtgtctatttgatgaatttgaggaaatctggaactttgggccacccaggc
tctctagatgagaccacctatgaaagactagcagaggaaacgctggactctttagcagag
ttttttgaagaccttgcagacaagccatacacgtttgaggactatgatgtctcctttggg
agtggtgtcttaactgtcaaactgggtggagatctaggaacctatgtgatcaacaagcag
acgccaaacaagcaaatctggctatcttctccatccaggtatgtagactgcggggttccg
ggggagcaggacccaggccgttctgcgcctgtcttcttggaaggagcaggccggagcgcg
ggagcgccgtgtagctgtacctgcgaaggcacaggattccgcgggaagatcccgcagttt
cgggccgtcgtcattgtttttatacctgtggcaaatggcatgaccagacacacggttatg
tctggagaaacccctgtagaggagcaggaggttgtggacatgctgtggcccggacagtgg
ctgccgagcagttggagcctgcacccgcccaacttggctaaagaagtccccatactctct
gtggaaaagatttccagaagctgttgtgtcaatatcaaagcctcaaaacaacaacaacaa
caacaaaaacatgaaattatcaacaataaagatcatccttga

>gi568815589f:68935783_69172759|GENSCAN_predicted_peptide_5|60_aa
MGHQGHQEGGSGPKRYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLDLSSLAYSGKDA

>gi568815589f:68935783_69172759|GENSCAN_predicted_CDS_5|183_bp
atgggccaccagggccaccaggagggaggcagtggacctaagcgttatgactggactggg
aaaaactgggtgtactcccacgacggcgtgtccctccatgagctgctggccgcagagctc
actaaagccttaaaaaccaaactggacttgtcttccttggcctattccggaaaagatgct
tga

>gi568815589f:68935783_69172759|GENSCAN_predicted_peptide_6|239_aa
XAALFNKMTTCHHLIGTGDSNNTKPSLPSKITQSNAATSNCDPACCNTDVSDHGTRHLSM
RPALAGTHFHSSTKPLHTQDAQTSLKPGPFRHASSRPALPKASKALVLKAGFPEQQQQHD
LASPLAGITGSEAPIRKYRFLHPDNSGQVYGIEFNPPKTVGIDDLTGEPLIQREDDKPET
VIKRLKAHETQTKPVLEYYQKKGVLETFSGTETNKIWPYEYAFLQTKVPQTSQKSSVTS

>gi568815589f:68935783_69172759|GENSCAN_predicted_CDS_6|720_bp
nnagcggcactgttcaataagatgaccacttgccaccatctgattggcactggagattca
aataataccaagccatccttgccttcaaaaatcacccagtctaatgctgcaacaagcaac
tgcgacccagcatgctgtaatacggatgtgagtgaccatggaaccaggcacttgtctatg
cgccctgctttggctggtacccacttccacagctccaccaagcccctgcacacacaggat
gcccagaccagcctcaagcccggccccttccgtcatgcaagttccagacctgcacttcca
aaggcctccaaagcactggttctcaaagcgggattcccagagcagcagcagcagcatgac
ctggcctcacccttagccgggatcactgggtctgaggcccccatccggaaataccggttc
ctccacccggacaatagtggccaagtctacggcattgaattcaaccctcccaaaactgtg
ggcattgatgatctaactggggagcctctcattcagcgtgaggatgataaaccagagacg
gttatcaagagactaaaggctcatgaaacccaaacaaagccagtcctggaatattaccag
aaaaaaggggtgttggaaacattctctggaacagaaaccaacaagatttggccctatgaa
tatgctttcctacaaactaaagttccacaaacaagccagaaatcttcagttacttcatga