GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:27:25

Sequence gi568815589r:21207098_21328173 : 121076 bp : 37.47% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    371    366    6                               1.05
 1.05 Term -   2578   2255  324  1  0   56   55   282 0.616  15.48
 1.04 Intr -   4069   3930  140  2  2   71   72    84 0.753   4.36
 1.03 Intr -   4391   4253  139  2  1   43   31   106 0.650  -0.48
 1.02 Intr -   4829   4785   45  2  0   92   80    55 0.506   2.79
 1.01 Init -  10208   9783  426  2  0   59   40   313 0.575  18.85
 1.00 Prom -  10464  10425   40                              -9.55

 2.00 Prom +  10735  10774   40                              -4.85
 2.01 Sngl +  14024  16066 2043  1  0   42   47   297 0.375  14.94
 2.02 PlyA +  16275  16280    6                               1.05

 3.02 PlyA -  18345  18340    6                               1.05
 3.01 Sngl -  21076  20507  570  1  0   59   48   244 0.655  12.31
 3.00 Prom -  22783  22744   40                              -6.75

 4.06 PlyA -  23232  23227    6                               1.05
 4.05 Term -  24655  24416  240  1  0   51   37   261 0.762  12.34
 4.04 Intr -  26132  25993  140  0  2   77   72    97 0.619   6.26
 4.03 Intr -  26890  26776  115  1  1   95   69    62 0.501   4.10
 4.02 Intr -  32746  32344  403  0  1   62  -10   306 0.001  11.70
 4.01 Init -  44395  44049  347  1  2   71   68   163 0.410   9.33
 4.00 Prom -  62949  62910   40                              -4.75

 5.05 PlyA -  63750  63745    6                               1.05
 5.04 Term -  68363  67786  578  0  2    5   42   231 0.169   3.84
 5.03 Intr -  71330  71159  172  2  1   63  -14   216 0.048   7.49
 5.02 Intr -  74549  74459   91  1  1   49  106    15 0.032  -1.52
 5.01 Init -  92432  90829 1604  2  2   42   53   408 0.150  24.60
 5.00 Prom -  95441  95402   40                              -4.35

 6.05 PlyA -  95941  95936    6                               1.05
 6.04 Term -  98248  97590  659  2  2   30   48   466 0.501  29.92
 6.03 Intr - 102931 102756  176  0  2   34    2   179 0.091   2.56
 6.02 Intr - 110982 110910   73  1  1   77   83    52 0.388   1.15
 6.01 Intr - 117224 117114  111  0  0   87  -10   115 0.066   1.03

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------


NO EXONS FOUND AT GIVEN PROBABILITY CUTOFF


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:21207098_21328173|GENSCAN_predicted_peptide_1|357_aa
MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRYDFG
FPQEVFDGNQFQKAQAISAFHEMIQQTFNLFSTKDSSAAWDETLLDKFYIELFQQLNDLE
ACVTQEVGVEEIALMNEDSILATQGSRDKTAAVAVAERRGDNQELRGEQCGHSSVRQLLC
FGDLEQPLFLTDFPEPGDSKGKSWLLQYAGGPIQTIVTSHFSVPEDINSEGYETVKMGTC
PSPWELCSREEHLGTSGPNVQNLHFLVSQGQKRLQVPPGDVDGSQLQKAQALSVLHEMLQ
QIFSLFPTERSSAAWNMTLLDQLHTGFHQQLECLESCLGQATGEEESVGVFGALHWP

>gi568815589r:21207098_21328173|GENSCAN_predicted_CDS_1|1074_bp
atggccctgtccttttctttactgatggccgtgctggtgctcagctacaaatccatctgt
tctctgggctgtgatctgcctcagactcacagcctgggtaataggagggccttgatactc
ctggcacaaatgggaagaatctctcatttctcctgcctgaaggacagatatgatttcgga
ttcccccaggaggtgtttgatggcaaccagttccagaaggctcaagccatctctgccttc
catgagatgatccagcagaccttcaatctcttcagcacaaaggattcatctgctgcttgg
gatgagaccctcctagacaaattctacattgaacttttccagcaactgaatgacctagaa
gcctgtgtgacacaggaggttggggtggaagagattgccctgatgaatgaggactccatc
ctggctacccaaggcagcagggataaaactgctgctgtggcagtggcagagaggagaggt
gacaaccaggaactgcgtggagaacagtgtggccactcttctgtgaggcagttgctctgt
tttggggatctggagcagccgctattccttacagacttcccagagcctggagacagcaag
ggcaagagctggctgctgcaatatgctgggggtccaatccagaccatagtcacctcacat
ttttcagtacctgaagatatcaacagtgaaggctatgaaacagtgaagatggggacctgc
ccctccccctgggagctctgttccagagaggaacaccttggcacttctgggccaaatgtg
cagaatctccactttcttgtgtctcaaggacagaagagacttcaggttccccctggagat
gtggatggcagccagttgcagaaggcccaggccctgtctgtcctccatgagatgcttcag
cagatcttcagcctcttccccacagagcgctcctctgctgcctggaacatgaccctcctg
gaccagctccacactggatttcatcagcagctcgaatgcctggagtcttgcttagggcag
gcaacaggagaggaagaatctgtgggggtgtttggggccctacactggccttga

>gi568815589r:21207098_21328173|GENSCAN_predicted_peptide_2|680_aa
MIISIIAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANVILNGQKLEAFSLK
TGTRQGYPLSPLLFNIVLEDLASAIRQKEIKCIQLEKEEIKLSLFADDMIVYLENSIFSA
PNLLKLISNFSKVSGYKINVQKSQALLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTR
DMKELFKENYKPLLNEIKEDTNKWKNIPCSWVGRINTVKMAIRPKVIYRFSAIPIKLPMT
FFTELEKTSLKFIWNQKRARTTKSILSQKNKAGGITLPDFKLYYKPTVTKTAWYWYQNRD
IDQWNRTEPSEITLHIYMYLIFDKPEKNKQWGKDSLFHKWCWENWLAICRKLKLDPFLTP
YTKINSRWIKDLNVRPKTIRTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIK
LKSFCTAKETTIRVNRQPTKWEKIFTTYLSDKGLISRIYNELKQIYKKKTNNPIKKWAKD
MNRHFSKEDIYAAKRHMKKCSSSLAIREMQIKTTMRYHLTPVRIAIIKKSGNNRCWRGCG
EIGTLLHCWWECKLVQPLWKSVWRFLRDLELEIPFDPAIPLQGIYPKDYKSCCYKDTCTR
MFIEALFIIAKAWNQHKCPTMIDWIKKMWHIYTMEYYAAIKKDEFMSFVGTWMKLEIIIL
SKLWQGQKTKHRMFSLIDGN

>gi568815589r:21207098_21328173|GENSCAN_predicted_CDS_2|2043_bp
atgattatctcaataattgcagaaaaggcctttgacaaaattcaacaacccttcatgcta
aaaactctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctat
gacaaacccacagccaatgtcatactgaatgggcaaaaactggaagcattctctttgaaa
actggcacaagacagggataccctctctcaccactcctattcaacatagtgttggaagat
ctggccagtgcaattaggcagaaggaaataaagtgtattcaactagaaaaagaggaaatc
aaattgtccctgtttgcagatgacatgattgtatatctagaaaactccattttctcagcc
ccaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta
caaaaatcacaagcactcttatacaccaataacagacaaacagagagccaaatcatgagt
gaactgccattcacaattgcttcaaagagaataaaatacttaggaatccaactgacaagg
gatatgaaggaactcttcaaggagaactacaaaccactgctcaatgaaataaaagaggat
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatactgtgaaaatg
gccatacggcccaaggtaatttatagattcagtgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactagtttaaagttcatatggaaccaaaaaagagcccgc
accaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgacttc
aaactatactacaagcctacagtaaccaaaacagcatggtactggtaccaaaacagagat
atagatcaatggaacagaacagagccctcagaaataacgctgcatatctacatgtatctg
atctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttcataaatgg
tgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacacct
tatacaaaaattaattcaagatggattaaagacttaaacgttagacctaaaaccataaga
accctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatg
tctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaa
ctaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaa
tgggagaaaattttcacaacctacttatctgacaaagggctaatatccagaatctacaat
gaactcaaacaaatttacaagaaaaaaaccaacaaccccatcaaaaagtgggcaaaggat
atgaacagacacttctcaaaagaagacatttatgcagccaaaagacacatgaaaaaatgc
tcatcatcactggccatcagagaaatgcaaatcaaaaccaccatgagataccatctcaca
ccagttagaatagcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtgga
gaaataggaacacttttacactgttggtgggagtgtaaactagttcaaccattgtggaag
tcagtgtggcgattccttagggatctagaactagaaataccatttgacccagccatccca
ttacagggtatatacccaaaggactataaatcctgctgctataaagacacatgcacacgt
atgtttattgaggcactattcataatagcaaaggcttggaaccaacacaaatgtccaaca
atgatagactggattaagaagatgtggcacatatacaccatggaatactatgcagccata
aaaaaggatgagttcatgtcctttgtagggacatggatgaaattggaaatcatcattctc
agtaaactatggcagggacaaaaaaccaaacaccgcatgttctcactcatagatgggaat
tga

>gi568815589r:21207098_21328173|GENSCAN_predicted_peptide_3|189_aa
MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISPFSCLKDRHDFG
LPQEEFDGNQFQKTQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNNLE
ACVIQEVGMEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN
LQKILRRKD

>gi568815589r:21207098_21328173|GENSCAN_predicted_CDS_3|570_bp
atggccctgtccttttctttactgatggccgtgctggtgctcagctacaaatccatctgt
tctctaggctgtgatctgcctcagacccacagcctgggtaataggagggccttgatactc
ctggcacaaatgggaagaatctctcctttctcctgcctgaaggacagacatgactttgga
cttccccaggaggagtttgatggcaaccagttccagaagactcaagccatctctgtcctc
catgagatgatccagcagaccttcaatctcttcagcacagaggactcatctgctgcttgg
gaacagagcctcctagaaaaattttccactgaactttaccagcaactgaataacctggaa
gcatgtgtgatacaggaggttgggatggaagagactcccctgatgaatgaggactccatc
ctggctgtgaggaaatacttccaaagaatcactctttatctaacagagaagaaatacagc
ccttgtgcctgggaggttgtcagagcagaaatcatgagatctctctctttttcaacaaac
ttgcaaaaaatattaaggaggaaggattga

>gi568815589r:21207098_21328173|GENSCAN_predicted_peptide_4|414_aa
MEALSQLFRIFKSEGEKIEVDAESIQCSRGDMANTVPCMGDTDTTAACRVLEGTGLLQCQ
LQTPVSSLVPIKFSHYRQTYLWGQCNSRHLLNSSHNAASLKAVKNETMPEQKGHSSLNNR
RTLMLMAQMRRISPFSCLKDRHDFEFPQEEFDGNQFQKAQAISVLHEMMQQTFNLFSTKN
SSAAWDETLLEKFYIELFQQMNDLEACVIQEVGVEETPLMNEDSILAVKKYFQRITLYLM
EKKYSPCAWETQGSRDKTAAVAVAEVGWLWEPLPRETPGNYQWICSAMGLLQYAGGPIQT
IVTSHFSVPEDINSEGYETVKMRACPSPWELCSREEHLGSSGPNAENLHFLVSQGQKRLQ
VPPGDVDGSQLQKAQALSVLHEMLQQIFSVYPTECSSAAWNMTLLDQLHTGFHL

>gi568815589r:21207098_21328173|GENSCAN_predicted_CDS_4|1245_bp
atggaagcactgagtcaactgttcagaatattcaaatcagagggagagaagattgaagtg
gatgctgagagcatacagtgctcccgtggagacatggccaacactgtcccctgcatgggt
gacactgatactacagcagcctgtagagtattggaagggacagggttacttcagtgtcag
ctgcaaactcctgtttcctccctagtacccatcaagttctcacactacaggcaaacttat
ttatggggccaatgcaattcaaggcatctcttaaattctagtcataatgcagcctcctta
aaggcagtaaaaaatgaaacaatgcctgaacagaagggacacagcagcctgaataacagg
aggactttgatgctcatggcacaaatgaggagaatctctcctttctcctgcctgaaggac
agacatgactttgaatttccccaggaggaatttgatggcaaccagttccagaaagctcaa
gccatctctgtcctccatgagatgatgcagcagaccttcaatctcttcagcacaaagaac
tcatctgctgcttgggatgagaccctcctagaaaaattctacattgaacttttccagcaa
atgaatgacctggaagcctgtgtgatacaggaggttggggtggaagagactcccctgatg
aatgaggactccatcctggctgtgaagaaatacttccaaagaatcactctttatctgatg
gagaagaaatacagcccttgtgcctgggagacccaaggcagcagggataaaactgctgct
gtggcagtggcagaggtaggatggctgtgggagcctctccccagggaaactccaggcaac
taccagtggatatgctcagctatggggctgctgcaatatgctgggggtccaatccagacc
atagtcacttcacatttttcagtacctgaagatatcaacagtgaaggctatgaaacagtg
aagatgagggcctgcccctccccctgggagctctgttccagagaggaacaccttggctct
tctgggccaaatgcagagaatctccactttcttgtgtctcaaggacagaagagacttcag
gttccccctggagatgtggatggcagccagttgcagaaggcccaggccctgtctgtcctc
catgagatgcttcagcagatcttcagcgtctaccccacagagtgctcctctgctgcctgg
aacatgaccctcctggaccagctccacactggatttcatctgtag

>gi568815589r:21207098_21328173|GENSCAN_predicted_peptide_5|814_aa
MIISIDAEKAFDQIQQCFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLK
TGARQGCPLSLLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVS
AKNLLKLISNFSKVSGYKLNVQKSQAFLYTNNRQTESQVMSELPFTIASKRIKYLGIQLT
RDMKDLFKENYKPLLNEIKEDTNKWKNIPCSWLRRINIVKMAILPKVIYRFNAIPIKLPM
TFFTELEKTTLKFIWNQKRARTAKSILSQKNKAGGITLPDFKLYYKPTVTKTAWYWYQNR
DIDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFHKWCWENWLAICRKLKLDPFLI
PYTKINSRWIKDLNVSPKTIKTLEENLGNTIQDIGMGKDFMSKTPKAMATKAKIDKWDLI
KLKSFCTAKETTIRVNRQPTEWEKIFATYSFDKGLISRIYNELKQIYKRKSNNPIKKWAK
DMNRHFSKEDIYAAKKHVKKCSSSLAIREMQIKTTMRYHLTLVRMAIIKKSGINSFGICC
KSPKLSLPYRNTKCQHNVFVYQFLKVFHGNHFQKVQAIFLFHEMMQQTFNLFSTKDSSDT
WDATLLDKFYTELYQQLNDLEAYQKEKEDKEGLYIMLKGSMQQEELTILTIYAPNTGAPR
FIKQVLRDLQRGLDSHTIIVGEFNTPLSILDRSTRQKINKDIQDLNSALDQADLIDICRT
FHPKLTEYTFFSASRHTYSKIDHIIGNKTLLSKRKRMEIKTNSLSDHNAIKLELGIKKLT
QNPTTTWKLNNLLLNGYWINNEIKAEVHKFFETN

>gi568815589r:21207098_21328173|GENSCAN_predicted_CDS_5|2445_bp
atgattatctcaatagatgcagaaaaggcctttgaccaaattcaacaatgcttcatgcta
aaaactctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggtgcaagacagggctgccctctctcactactcctattcaacatagtgttggaagtt
ctggccagggcaatcaggcaggagaaggaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgtatatctagaaaaccccattgtctca
gccaaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaactcaat
gtacaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaagtcatg
agtgaactgccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatatgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagag
gatacaaacaaatggaagaacattccatgctcatggttaagaagaatcaatatcgtgaaa
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcaccgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgac
ttcaaactatactacaagcctacagtaaccaaaacagcatggtactggtaccaaaacaga
gacatagaccaatggaacagaacagagccctcagaaataatgccgcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttcataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttata
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagtcctaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
gaatgggagaaaattttcgcaacctactcatttgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagagaaaatcaaacaaccccatcaaaaagtgggcgaag
gatatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacgtgaaaaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctc
acacttgttagaatggcgatcattaaaaagtcaggaataaacagttttggcatctgttgc
aagagtcctaaattaagtcttccttaccgtaataccaagtgtcagcataatgtttttgtt
taccagttcctcaaagtgtttcatggcaaccacttccagaaggttcaagctatcttcctt
ttccatgagatgatgcagcagaccttcaacctcttcagcacaaaggactcatctgatact
tgggatgcgacccttttagacaaattctacactgaactttaccagcagctgaatgacctg
gaagcctatcaaaaagaaaaagaagacaaagaagggctttacataatgttaaagggatca
atgcaacaagaagagctaactattctaactatatatgcacccaatactggagcacccaga
ttcataaagcaagttcttagagacctacaaagaggtttagactcccacacaataatagtg
ggagaatttaacaccccactgtcaatattagacagatcaacaagacagaaaattaacaag
gatattcaggacttgaactcagctctggaccaagcagacctaatagacatctgcagaact
ttccaccccaaattaacagaatacacattcttctcagcatcacgtcacacttattctaaa
attgaccacataattggaaataaaacactcctcagtaaacgcaaaagaatggaaatcaaa
acaaacagtctctcagaccacaatgcaatcaagttagaactcgggattaagaaactcact
caaaaccccacaactacatggaaactgaacaacctgctcctgaatggctactggataaat
aatgaaattaaggcagaagtacataagttctttgaaaccaattag

>gi568815589r:21207098_21328173|GENSCAN_predicted_peptide_6|339_aa
XQASCHVVSTYHIAPWRCPCDCDEELRLPVSGRVSDPYWESVQPANVGVELQGKSRKISW
LRKLAINIRALCTHLIPEDTDPGQEEITIEKPNPSHKHSKGKGKDLGALIILAQRKRPFP
NLCTKQGLQRRAQGSGSLNLNSPEASATSPMALPFVLLMALVVLNCKSICSLGCDLPQTH
SLSNRRTLMIMAQMGRISPFSCLKDRHDFGFPQEEFDGNQFQKAQAISVLHEMIQQTFNL
FSTKDSSATWDETLLDKFYTELYQQLNDLEACMMQEVGVEDTPLMNVDSILTVRKYFQRI
TLYLTEKKYSPCAWEVVRAEIMRSFSLSANLQERLRRKE

>gi568815589r:21207098_21328173|GENSCAN_predicted_CDS_6|1020_bp
ntacaagccagctgccatgttgtgagcacataccacatagctccatggagatgcccatgt
gactgtgatgaagagctaagacttcctgtcagtggccgtgtgagtgacccatactgggaa
tcagtacaacctgccaatgtaggtgtagaactacaagggaaatcaagaaaaatctcctgg
ttaaggaaacttgctatcaacatccgagcactgtgcacacatttgatccctgaggacaca
gaccctggacaggaggagatcaccattgagaagccaaatccttcacacaaacactctaag
ggcaagggcaaagatcttggagcattaattattttggctcaaagaaaaagacctttccct
aatctgtgcacaaaacaaggtcttcagagaagagcccaaggttcagggtcactcaatctc
aacagcccagaagcatctgcaacctccccaatggccttgccctttgttttactgatggcc
ctggtggtgctcaactgcaagtcaatctgttctctgggctgtgatctgcctcagacccac
agcctgagtaacaggaggactttgatgataatggcacaaatgggaagaatctctcctttc
tcctgcctgaaggacagacatgactttggatttcctcaggaggagtttgatggcaaccag
ttccagaaggctcaagccatctctgtcctccatgagatgatccagcagaccttcaatctc
ttcagcacaaaggactcatctgctacttgggatgagacacttctagacaaattctacact
gaactttaccagcagctgaatgacctggaagcctgtatgatgcaggaggttggagtggaa
gacactcctctgatgaatgtggactctatcctgactgtgagaaaatactttcaaagaatc
accctctatctgacagagaagaaatacagcccttgtgcatgggaggttgtcagagcagaa
atcatgagatccttctctttatcagcaaacttgcaagaaagattaaggaggaaggaatga