GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:04:51

Sequence gi568815590f:108987513_109219452 : 231940 bp : 37.57% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3144   3272  129  2  0   78   99    80 0.715   8.30
 1.02 Intr +  38752  38773   22  0  1   69   99    50 0.195   0.40
 1.03 Intr +  45495  45639  145  1  1   12   98   137 0.401   5.52
 1.04 Term +  51627  51687   61  0  1   81   41    70 0.132  -2.10
 1.05 PlyA +  52692  52697    6                               1.05

 2.02 PlyA -  52863  52858    6                               1.05
 2.01 Sngl -  57913  57347  567  1  0   54   49   234 0.597  12.00
 2.00 Prom -  64374  64335   40                              -5.55

 3.00 Prom +  69968  70007   40                              -3.85
 3.01 Init +  70093  70207  115  0  1   78   50    88 0.773   4.42
 3.02 Intr +  72236  72283   48  0  0  110   96     3 0.611   1.03
 3.03 Term +  73837  73955  119  2  2   93   43    98 0.933   3.52
 3.04 PlyA +  74794  74799    6                               1.05

 4.00 Prom +  74964  75003   40                              -7.65
 4.01 Sngl +  82721  83116  396  1  0   69   46   376 0.918  27.50
 4.02 PlyA +  84765  84770    6                               1.05

 5.00 Prom +  97860  97899   40                              -7.25
 5.01 Init + 100001 100789  789  1  0   66  115   504 0.774  45.64
 5.02 Intr + 125018 125107   90  1  0  122   50    62 0.058   5.07
 5.03 Intr + 131536 131922  387  0  0  116   53   318 0.050  25.16
 5.04 Intr + 137433 137544  112  2  1   23  110   111 0.839   5.83
 5.05 Term + 153650 153735   86  0  2  115   43    42 0.183  -0.76
 5.06 PlyA + 154157 154162    6                               1.05

 6.08 PlyA - 155151 155146    6                               1.05
 6.07 Term - 164232 163990  243  0  0   69   43   135 0.632   2.02
 6.06 Intr - 166692 166570  123  0  0   20   74   118 0.508   3.46
 6.05 Intr - 186847 186791   57  1  0   62   92    51 0.002   1.06
 6.04 Intr - 193596 193432  165  0  0   22   70   188 0.807   9.64
 6.03 Intr - 195192 195106   87  0  0   73   79    71 0.518   3.95
 6.02 Intr - 196244 196207   38  0  2  102   86    35 0.595   1.76
 6.01 Init - 207921 207786  136  0  1   53   57   125 0.617   6.25
 6.00 Prom - 217670 217631   40                              -3.95

 7.00 Prom + 220310 220349   40                              -4.05
 7.01 Init + 223546 223629   84  0  0   74  101    16 0.094   2.38
 7.02 Term + 226183 226419  237  0  0   40   41   157 0.068   1.38
 7.03 PlyA + 226715 226720    6                               1.05

 8.02 PlyA - 226830 226825    6                               1.05
 8.01 Term - 228024 227152  873  0  0   16   37   331 0.255  12.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:108987513_109219452|GENSCAN_predicted_peptide_1|118_aa
MEYYAAIEKSEFMSFAGTWMKLETIILSKLTQEQRAKHCMFSLIKGALKADTVDRALTSV
YGNLEGNRDKHRSCFDGREKASFRSLVKVTPIVENDPLSFPGSSTGRADLATIQELNR

>gi568815590f:108987513_109219452|GENSCAN_predicted_CDS_1|357_bp
atggaatactatgcagccatagaaaagagcgagttcatgtcctttgcagggacatggatg
aagctggaaaccatcattctcagcaaactaacacaggaacagagagccaaacactgcatg
ttctcactcataaagggcgctttgaaggctgacacagtggatcgagctctgacctctgtc
tatggaaatctggaaggcaacagagacaagcacaggagctgctttgatggtagggagaag
gcaagtttccgcagcctggtgaaagtgactccaattgttgaaaatgaccccttaagcttt
cctggatcctccactggaagggcagaccttgccacaatccaggaactaaacaggtaa

>gi568815590f:108987513_109219452|GENSCAN_predicted_peptide_2|188_aa
MWESLELPRDLLSGFAQNVDSNMDNKVQAEVVSDGHEELVGNWSKGDSCDVLAKRLAAFC
PCPRDLQNFELERGDLGYLVEEISKQQSIQEVTWVLLKAYSFKRETEHKSLKNLQHDSAI
EKKIPFSEEKFKPAAKIYISNVESNVNPQDNGEYIFRECQRSSWHPPTHHRPRGLEGKSG
FVGRAQGP

>gi568815590f:108987513_109219452|GENSCAN_predicted_CDS_2|567_bp
atgtgggaaagtttggaacttcctagagacttgttgagtggctttgcccaaaatgttgat
agcaatatggacaataaggtccaggctgaggtggtctcagatggacatgaggaacttgtt
gggaactggagcaaaggtgactcttgtgatgttttagcaaagagactggcagcattttgc
ccctgccctagagatttgcagaactttgaacttgagagaggtgatttagggtatctggtg
gaagaaatttctaagcagcaaagcattcaagaagtgacttgggtgctattaaaagcatac
agttttaaaagggaaacagagcataaaagtctgaaaaatttgcagcatgacagtgcaata
gaaaagaaaatcccattttctgaggagaaattcaagccagctgcaaaaatttacataagt
aatgtggagtcaaatgttaatccccaagacaatggggaatatatcttcagggaatgtcag
aggtcttcatggcacccccccacccatcaccggcccagaggcctagaaggaaaaagtggt
tttgtgggccgggcccagggtccttga

>gi568815590f:108987513_109219452|GENSCAN_predicted_peptide_3|93_aa
MEYYAAIKQNEFMSFAGTWMKLEAIILSKLTQEQKTKYRSSYSPASAFRVAGITEIPAFQ
HGIKHTHAAQDSKKLKEDPEEGGVVAGLAAASH

>gi568815590f:108987513_109219452|GENSCAN_predicted_CDS_3|282_bp
atggaatactatgcagccataaaacagaatgagttcatgtcctttgcagggacatggatg
aagctggaagccatcattctcagcaaactaacacaggaacagaaaaccaagtaccgttca
agctattctcctgcctcagccttccgcgtagctgggatcacagaaatcccagcctttcag
catggcattaagcacacacatgcggcccaggattccaagaagctgaaggaggatccagag
gaaggtggagtagttgcaggcctggctgctgcctcacactaa

>gi568815590f:108987513_109219452|GENSCAN_predicted_peptide_4|131_aa
MVCPEFVPSDVQMCPEFLPSGGFAVSLASGVKPQIFMVSVTALKGSASGIVGSSYPDLFI
PPGGFVVSLASGMKLQTVAVSVTAHKGSADPNSEQQQDLVRRAKEQSFHTVESDPSELPL
LAQAACFYSVI

>gi568815590f:108987513_109219452|GENSCAN_predicted_CDS_4|396_bp
atggtgtgtccggagtttgtgccttcagatgttcagatgtgtccagagtttcttccttct
ggtgggttcgcggtctcgctggcttcaggagtgaagccgcagatcttcatggtgagtgtt
acagctcttaaaggcagcgcatctggaattgttggttcctcctatccagacttgttcatc
cctcccggtgggttcgtggtttcgctggcttcaggaatgaagctgcagaccgtcgcggta
agtgttacagctcataaaggcagcgcggacccaaacagtgagcagcagcaagatttagtg
cgaagagcaaaagaacaaagcttccacactgtggaaagtgacccaagcgagttgccactg
ctggctcaggcagcctgcttttattccgttatctga

>gi568815590f:108987513_109219452|GENSCAN_predicted_peptide_5|487_aa
MENETVSELNQTQLQPRAVVALEYQVVTILLVLIICGLGIVGNIMVVLVVMRTKHMRTPT
NCYLVSLAVADLMVLVAAGLPNITDSIYGSWVYGYVGCLCITYLQYLGINASSCSITAFT
IERYIAICHPIKAQFLCTFSRAKKIIIFVWAFTSLYCMLWFFLLDLNISTYKDAIVISCG
YKISRNYYSPIYLMDFGVFYVVPMILATVLYGFIARILFLNPIPSDPKENSKTWKNDSTH
QNTNLNVNTSNRCFNSTVSSRKQEIDEYEGVLSPLLRNLLPNQCFLNVALLFGVTKMLAV
VVILFALLWMPYRTLVVVNSFLSSPFQENWFLLFCRICIYLNSAINPVIYNLMSQKFRAA
FRKLCNCKQKPTEKPANYSVALNYSVIKESDHFSTELDDITVTDTYLSATKVSFDDTCLA
SESSEHTLKITELRPSYRAFKALTYHIILNKQLNGKILEDWSKHTSLSTLLPQIPGVWQV
LSLNKES

>gi568815590f:108987513_109219452|GENSCAN_predicted_CDS_5|1464_bp
atggaaaacgagacagtcagtgaactgaaccaaacacagcttcagccacgagcagtggtg
gccttagaataccaggtggtcaccatcttacttgtactcattatttgtggcctgggcatt
gtaggcaacatcatggtagtcctggttgtcatgagaaccaagcacatgaggacccccaca
aactgctacctggtgagcctggcagtagctgatctcatggtcttggtggccgcaggcctc
cccaacataacagacagtatctacggttcctgggtctatggctatgttggatgcctctgc
attacttacctccagtatttgggaattaatgcatcctcttgttcaataacagcctttacc
attgagaggtacatagcaatctgtcaccccatcaaagcccagtttctctgcacattttcc
agagccaaaaagattatcatctttgtctgggctttcacatctctttactgtatgctctgg
ttcttcttgctggatctcaatattagcacctacaaagatgctattgtgatatcctgtggc
tacaagatctccaggaattactactcacctatttacctaatggactttggtgtcttttat
gttgtgccaatgatcctggctaccgtcctctatggattcatagctagaatccttttctta
aatcccattccttcagatcctaaagaaaactctaagacatggaaaaatgattcaacccat
cagaacacaaatctgaatgtaaatacctctaatagatgtttcaacagcacagtatcttca
aggaagcaggaaatagatgagtatgaaggagttctgtctcccttgttacgaaatcttctt
cctaatcagtgctttctgaatgtagcactcctgtttggggtcaccaagatgctggcagtg
gttgtaattctgtttgcccttttatggatgccctacaggactctagtggttgtcaactca
tttctctccagtcctttccaagaaaattggtttttgctcttttgcagaatttgcatttat
ctcaacagtgccatcaacccggtgatttacaatctcatgtcccagaaattccgtgcagcc
ttcagaaagctctgcaactgcaagcagaagccaacagagaaacctgctaactacagtgtg
gccctaaattacagcgtcatcaaggagtcagaccatttcagcacagagcttgatgatatc
actgtcactgacacttacctgtctgccacaaaagtgtcttttgatgacacctgcttggct
tctgagtcttctgagcacaccttgaaaatcactgaactcaggccctcatatagagccttc
aaggctcttacttatcacataattcttaataagcaactaaacggaaagatccttgaggat
tggtccaagcatacttctttgagtacacttcttccccagattcctggtgtttggcaagtc
ttatcacttaataaggaatcatga

>gi568815590f:108987513_109219452|GENSCAN_predicted_peptide_6|282_aa
MWESLELPRDFLNGFAQNTDSDMDNEVQAEVVSDGDEELVENWSKESSCGLFVEEERKLK
DRRPNFVMVEQLQCLAAMRASSGSAGKSILTLLRRNTRDWVIYKGKRFNQLAVRHCWGSL
RKLTIMVEGKGEVGTFTGQQDRDDVATTTAECPIRQQWRSILNTCDDSDDDEEPTKLQEW
GLAKGTLWSNGFQSFSILASRGGHKCVARSSEGNSCPESLPLENCLYIVEGIAEDTFTLI
PESVISLEPASFICSAFSGPCQILEQSCKGSRSRLTLYRETL

>gi568815590f:108987513_109219452|GENSCAN_predicted_CDS_6|849_bp
atgtgggaaagtttggaacttcctagagactttttgaatggctttgcccaaaatactgat
agtgacatggacaatgaagtccaggctgaggtggtctcagatggagacgaggaacttgtt
gagaactggagtaaagagagttcctgtggcttatttgttgaggaggaaagaaagctcaag
gataggagacccaactttgtaatggtggagcaactgcagtgtctagcagcaatgagagca
tctagtggcagtgctggtaagtctattcttacactgctacgaagaaatacccgagactgg
gtaatttataaaggaaagaggtttaatcaactcgcagttcggcattgctggggaagcctc
aggaaacttacaatcatggtggaaggcaaaggagaagtaggcaccttcacagggcagcag
gacagagatgatgtggctacaaccactgctgaatgtccaatacgccagcagtggagatca
atacttaatacatgtgatgacagtgatgatgatgaagagccaaccaagctacaggagtgg
ggcttggccaagggaaccctttggtccaatggttttcaaagtttcagcatattggcatca
cgtgggggacataagtgtgtagcacgttcttctgaaggaaactcttgtcctgagtcccta
cctttagaaaactgcctgtacattgtagaggggattgcagaggacacctttaccctaatt
cctgagagtgtgatcagtctagaacctgccagcttcatctgcagtgccttttctggtccc
tgtcagattctggaacaaagctgcaaaggcagccgttctaggctgactctatatagagag
acattataa

>gi568815590f:108987513_109219452|GENSCAN_predicted_peptide_7|106_aa
MGQRIPSLAELRKSPATFLVCNVGTREAGHQRAPWSSGDASVWEDARCQADHSLAVAKSV
KEQHLLLSRLGKGVSFSPGEFREDSAPPPLVEGLTSVRLACSYLEA

>gi568815590f:108987513_109219452|GENSCAN_predicted_CDS_7|321_bp
atgggacaaagaatcccgtctttagctgagctaaggaaaagtcctgcaacatttttggtg
tgcaatgttgggactcgagaagcgggccaccagagggctccttggtctagtggtgacgct
agcgtctgggaagatgcccgttgccaggcagaccatagtctagcggtagcgaaaagtgtc
aaggaacaacacctgctacttagcagactgggaaagggagtctccttttccccaggggag
tttagagaagactctgctcctccacctcttgtggagggcctgacatcagtcaggcttgcc
tgcagttatctggaggcctaa

>gi568815590f:108987513_109219452|GENSCAN_predicted_peptide_8|290_aa
VSIILIPKASRDTTEKEYFRTISLMNIDAKIFNKILANQIQQHIKKLFHHGQVGFIHGMQ
GWFNIQKSINVIHHINRTNDKNHMIVSIDAEKAFDKIQHLFMLKTLSKLGIDGMYLKIIR
AIYDKLTANTILNGQKLEAFPLKTSTRQGCPLSPLSFNIVLEVLTRAIRQEKEIKCIQIG
REEVKLSLFADDMIVYLENPIVSVQNLLKLISNFSKVSEYKINVQKSQAFLYTSNSQIIS
EHPFTIATNRIKYLGIQFTKDVKDLFKENYKQLLKEIRKDTNKWKNIPCS

>gi568815590f:108987513_109219452|GENSCAN_predicted_CDS_8|873_bp
gtcagcatcatcttgataccaaaagctagcagagatacaacagaaaaagaatatttcagg
acaatatccctgatgaacatcgatgcaaaaatcttcaataaaatactggcaaaccaaatc
cagcagcacatcaaaaagcttttccaccatggtcaagtcggcttcatccatgggatgcaa
ggctggttcaacatacagaaatcaataaacgtaatccatcacataaacagaaccaatgac
aaaaaccacatgattgtctcaatagatgcagaaaaggcctttgacaaaattcaacacctc
ttcatgctgaaaactctcagtaaactaggtattgatggaatgtatctcaaaataataaga
gctatttatgacaaactcacagccaataccatactgaatgggcaaaagctcgaagcattc
cctttgaaaaccagcacaaggcaaggatgtcctctctcaccactctcattcaacatagta
ttggaagttctgaccagggcaataaggcaagagaaagaaataaagtgtattcaaatagga
agagaggaagtcaagttgtctctgtttgcagatgacatgattgtgtatttagaaaacccc
attgtctcagtccaaaatctccttaagctaataagcaacttcagcaaagtctcagaatac
aaaatcaatgtgcaaaaatcacaagcattcctatacaccagtaatagccaaatcattagt
gaacacccgttcacaattgctacaaacagaataaaatatctaggaatacaatttacaaag
gatgtgaaggacctcttcaaggagaactacaaacaactgctcaaggaaataagaaaggac
acaaacaaatggaaaaacattccatgctcatag