GENSCAN 1.0	Date run:  8-Nov-116	Time: 01:32:55

Sequence gi568815590r:16010088_16277988 : 267901 bp : 36.41% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -   5212   5069  144  1  0   38   30   147 0.019   3.46
 1.04 Intr -  13283  13016  268  1  1  109   86    79 0.928   6.41
 1.03 Intr -  15754  15604  151  2  1   65   42   134 0.952   4.80
 1.02 Intr -  18307  18144  164  0  2   44   87   123 0.998   6.50
 1.01 Init -  20931  19805 1127  0  2   60   53   343 0.730  21.70
 1.00 Prom -  21468  21429   40                             -10.65

 2.00 Prom +  23191  23230   40                             -14.71
 2.01 Sngl +  23444  23887  444  1  0   88   36   334 0.904  24.19
 2.02 PlyA +  24321  24326    6                               1.05

 3.05 PlyA -  25666  25661    6                               1.05
 3.04 Term -  31217  31029  189  2  0   59   36   141 0.751   2.47
 3.03 Intr -  32820  32707  114  0  0   70   86    55 0.711   3.22
 3.02 Intr -  38625  38379  247  2  1   32    9   217 0.066   4.74
 3.01 Init -  52992  52934   59  0  2   90   48    62 0.277   3.23
 3.00 Prom -  61991  61952   40                              -4.65

 4.00 Prom +  72055  72094   40                              -4.05
 4.01 Init +  79751  79851  101  1  2   89   80    57 0.757   4.78
 4.02 Intr +  80968  81139  172  1  1   72   52   154 0.908   9.22
 4.03 Intr + 104281 104393  113  0  2  131   66    52 0.017   5.56
 4.04 Term + 124813 125119  307  1  1   15   44   244 0.123   6.30
 4.05 PlyA + 126300 126305    6                               1.05

 5.10 PlyA - 127742 127737    6                               1.05
 5.09 Term - 130658 130585   74  0  2   86   40    53 0.045  -2.61
 5.08 Intr - 133524 133471   54  1  0   78   97    45 0.052   2.43
 5.07 Intr - 140224 140144   81  2  0   67   67   116 0.074   6.09
 5.06 Intr - 145057 144977   81  2  0   41   52   108 0.048   1.19
 5.05 Intr - 154164 153978  187  0  1   72   93   188 0.972  16.04
 5.04 Intr - 158783 158371  413  0  2   39   94   331 0.049  21.78
 5.03 Intr - 165213 165100  114  1  0   57   97   121 0.878   9.40
 5.02 Intr - 167905 167799  107  0  2   74   91    66 0.688   4.44
 5.01 Init - 168325 168177  149  1  2   83   37    55 0.465  -0.49
 5.00 Prom - 183761 183722   40                              -4.65

 6.00 Prom + 192412 192451   40                              -2.75
 6.01 Sngl + 195078 195467  390  2  0   81   54   448 0.823  36.67
 6.02 PlyA + 195491 195496    6                               1.05

 7.07 PlyA - 197556 197551    6                               1.05
 7.06 Term - 203185 203080  106  0  1   54   48   105 0.487   0.00
 7.05 Intr - 205102 205072   31  2  1  125   86    29 0.892   2.67
 7.04 Intr - 210532 210450   83  0  2   31   55    91 0.030  -1.54
 7.03 Intr - 212613 212177  437  0  2   23   87   248 0.109   9.65
 7.02 Intr - 239888 239772  117  2  0   58   69    71 0.092   1.94
 7.01 Init - 250350 250315   36  0  0   64  119    22 0.201   2.96
 7.00 Prom - 250429 250390   40                              -3.55

 8.00 Prom + 263312 263351   40                              -4.05
 8.01 Sngl + 265611 265898  288  2  0   71   44   157 0.234   4.94
 8.02 PlyA + 266751 266756    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 113885 113762  124  2  1   64   40    77 0.851   0.88
S.002 Init - 205566 205506   61  0  1   83   47    74 0.867   4.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:16010088_16277988|GENSCAN_predicted_peptide_1|618_aa
MSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIV
KMAILPKVIYTFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGIMLP
DFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMLHIYNYLIFDKPEKNKPWGKDSLFN
KWCWENRLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKD
FMSKTPKAMARKAKIDKWDLIKLKSFCTAKDTTIRVNRQPTEWEKIFATYSSDKGLISRI
YNELKQIYKKETNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMRYH
LTPVRMAIIKKSGNNSPANASNNTGSFLQWAKFEYRRCQGKATELSVQYSQATKQASPSR
TQPFRGTVWADSAVGEIHTNLGPEVIIESRTLGLNSEFGSLTSDGKDGSAEEWGSKDSGM
ILFVFLHCCKRSEEAREFRSRLIIPGESEREGEKHNSLVSPYQELEKSCLESHPKDCCSH
IGYSPKPKQKTAKKLGQAPPTLIIIYPKLWVQQDVIGLLGNHREQLSLNVRGSNYVCMRF
KKHYKEKVAFEIRVGICQ

>gi568815590r:16010088_16277988|GENSCAN_predicted_CDS_1|1854_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acgagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaatggccatactgcccaaagtaatttatacattcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagaccaatggaacagaacagagccctcagaaataatgctgcatatctacaac
tatctgatctttgacaaacctgagaaaaacaagccatggggaaaggattccctatttaat
aaatggtgctgggaaaacaggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaattcaagatggattaaagacttaaacgttagacctaaaacc
ataaaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaagaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagatactaccatcagagtgaacaggcaacct
acagaatgggagaaaatttttgcaacctactcatctgacaaagggctaatatccagaatc
tacaatgaactcaaacaaatttacaagaaggaaacaaacaaccccatcaaaaagtgggcg
aaggatatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaa
aaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccat
ctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacagtccagccaatgcc
agcaacaatactggaagctttctccagtgggccaagtttgaatacaggaggtgccagggc
aaagctacagagctcagtgttcagtattcacaagccaccaagcaggcatccccatccaga
acccagcccttcagaggaactgtttgggcagactctgctgtgggggaaattcatacaaat
ttggggccagaagttatcatagaaagtagaactctgggattgaattctgaatttggatca
ctgacatcagatggcaaagatggcagtgctgaagagtggggtagcaaggattctggcatg
atattgtttgtcttccttcattgttgcaagaggtctgaagaagctcgtgaatttagatct
agactcattatacctggggaaagtgagagagagggggaaaagcacaactctttagtgtct
ccttatcaagagctagaaaaatcatgtttggaatcccatccaaaagactgctgctctcat
ataggttactcgcccaaaccaaaacaaaaaacagcaaagaaactagggcaagcaccacca
acacttattataatttatcccaagctgtgggtgcaacaagatgtaattggacttctagga
aatcacagagaacaactatctctgaacgtaagagggagcaactacgtctgcatgagattc
aagaaacactacaaagaaaaggtagcttttgaaatccgagtaggaatttgccaa

>gi568815590r:16010088_16277988|GENSCAN_predicted_peptide_2|147_aa
MGNKQSRKPRNSKNQSASPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSELKEEVR
TDGKETENFEKKVDEWITRITNAEKSLKDLMELKTMARGLRDKCRSLSNQCNQLEERVSA
MEDKMNEMKREEKFREKRIKRNEQSLQ

>gi568815590r:16010088_16277988|GENSCAN_predicted_CDS_2|444_bp
atggggaataaacagagcagaaaacccagaaactctaaaaatcagagtgcctctcctcct
ccaaaggaacgcagctcctcaccagcaacagaacaaagctggatggagaatgactttgac
gagttgagagaggaaggcttcagaagatcaaactactccgagctaaaggaggaagttcga
actgatggcaaagaaactgaaaactttgaaaaaaaagtagatgaatggataactagaata
accaatgcagagaagtccttaaaggacctgatggagctaaaaaccatggcacgaggacta
cgtgacaaatgcagaagcctcagtaaccaatgcaatcaactggaagaaagggtatcagca
atggaagacaaaatgaatgaaatgaagcgtgaagagaaatttagagaaaaaagaataaaa
agaaatgaacaaagcctccaataa

>gi568815590r:16010088_16277988|GENSCAN_predicted_peptide_3|202_aa
MNTHQKPTDAGTMLLQPAELNIRISSSAPLTLTVVTEECEYAYWKKVWSPMTALSLKNAL
GSSEIGRDPPKPTLPGGSNSDNRGNGRADGSAQHLLHVGKFLNIYETCAIYVSSPGERIL
NQRFGPHGAFILVREYDDIRFSHSGPPSTCPNFPGPSYYTARESAYALKLRALEIIQISQ
STKMQRNLGNPILPAIHQQPPQ

>gi568815590r:16010088_16277988|GENSCAN_predicted_CDS_3|609_bp
atgaatactcaccagaagccaacagatgctggaaccatgcttttacagcctgcagaactg
aatataagaatcagcagtagtgcccctttgacattgacagtggtgactgaagaatgtgag
tatgcctactggaaaaaggtgtggagccccatgacagctttgagcctaaagaatgcgctg
ggatccagtgaaattggcagggatcccccaaaacccacattacctggaggaagtaatagt
gacaacagagggaatggcagagcagatggcagtgcccagcatctattgcatgtgggaaaa
ttcctgaacatttatgaaacctgtgctatatatgtgtcaagccctggagaaagaattctg
aaccagagatttgggccccatggagcttttattctggtgagagagtatgatgatatacgt
ttctcacattctgggccaccaagcacctgccctaatttccctggtcccagttactacaca
gctagagagagtgcctatgccctgaagctcagagccctggaaattattcaaattagccag
tccacaaagatgcagagaaacctagggaaccccatactacctgccatacatcagcagccc
ccacagtag

>gi568815590r:16010088_16277988|GENSCAN_predicted_peptide_4|230_aa
MDITHVMNWVSEAIMFSDANALPETVASKKILYNFACEKIILDFPVWSLNLMTFVCQRGL
TQNEEGGGNATLEEEIAVIQLQVKKLPEAGRVWSFSTINSGEEAIVTPDLTSLISIHTGS
DIPGTNSWRQIQVQSKALPLFNSMEAEKGEETAGEKLEASRGWFIRFKERSHLHNIKVQD
DLASVDIEASENCPEDLVRIIDEGYYTTQQIFNVDETASVEKDAIYNFHT

>gi568815590r:16010088_16277988|GENSCAN_predicted_CDS_4|693_bp
atggatataactcatgtcatgaactgggtcagtgaagcaattatgttttctgatgccaat
gctctccctgaaactgtagcatcaaagaaaattctctacaattttgcatgtgagaagatt
atcctggactttcctgtttggtccctaaatctaatgacatttgtgtgtcagagaggtttg
acacagaatgaagaaggaggaggcaatgcgaccttggaggaggagattgcagtgatacaa
ctacaagtcaagaagctgcctgaagctggaagagtttggagtttcagcactataaactca
ggagaagaagcaatagttactccagatcttacttccctcatcagcatccatacaggctca
gatatacctggaacaaattcttggagacaaatccaagtccagagcaaggctctacctctc
ttcaattctatggaggctgagaaaggtgaggaaactgcaggagaaaagttggaagctagc
agaggttggttcataaggtttaaggaaagaagccatctccataacataaaagtacaagat
gatttagcaagtgtggatatagaagcttcagaaaattgtccagaagatctagttaggata
attgatgaaggttactacactacacaacagattttcaatgtagatgaaacagcttctgtt
gaaaaagatgccatctataactttcatacttag

>gi568815590r:16010088_16277988|GENSCAN_predicted_peptide_5|419_aa
MDEAGNHHSQQTIARTKTQTPHVLTHRWKLNNENTWSQEGERHTLGPVVGSMEQWDHFHN
QQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLVFAVLIPLIG
IVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSNMEKRIQHIL
DMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSLISLNTTLLD
LQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEIKGEVKVLNN
ITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIGPPGLKGDRG
AIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTWTPLMHGLEGCSNQSSVLCHPLT

>gi568815590r:16010088_16277988|GENSCAN_predicted_CDS_5|1260_bp
atggatgaagctggaaaccatcattctcagcaaactatcgcaaggacaaaaacccaaaca
ccgcatgttctcactcataggtggaaattgaacaatgagaacacatggtcacaggaaggg
gaacgtcacacactggggcctgttgtgggaagtatggagcagtgggatcactttcacaat
caacaggaggacactgatagctgctccgaatctgtgaaatttgatgctcgctcaatgaca
gctttgcttcctccgaatcctaaaaacagcccttcccttcaagagaaactgaagtccttc
aaagctgcactgattgccctttacctcctcgtgtttgcagttctcatccctctcattgga
atagtggcagctcaactcctgaagtgggaaacgaagaattgctcagttagttcaactaat
gcaaatgatataactcaaagtctcacgggaaaaggaaatgacagcgaagaggaaatgaga
tttcaagaagtctttatggaacacatgagcaacatggagaagagaatccagcatatttta
gacatggaagccaacctcatggacacagagcatttccaaaatttcagcatgacaactgat
caaagatttaatgacattcttctgcagctaagtaccttgttttcctcagtccagggacat
gggaatgcaatagatgaaatctccaagtccttaataagtttgaataccacattgcttgat
ttgcagctcaacatagaaaatctgaatggcaaaatccaagagaataccttcaaacaacaa
gaggaaatcagtaaattagaggagcgtgtttacaatgtatcagcagaaattatggctatg
aaagaagaacaagtgcatttggaacaggaaataaaaggagaagtgaaagtactgaataac
atcactaatgatctcagactgaaagattgggaacattctcagaccttgagaaatatcact
ttaattcaaggtcctcctggacccccgggtgaaaaaggagatcgaggtcccactggagaa
agtggtccacgaggatttccaggtccaataggtcctccgggtcttaaaggtgatcgggga
gcaattggctttcctggaagtcgaggactcccaggatatgccggaaggccaggaaattct
ggaccaaaaggccagaaaggggaaaaggggagtggaaacacattaacctggacacctctc
atgcacggactggagggctgctccaaccagtcctcagttctctgccacccattgacctag

>gi568815590r:16010088_16277988|GENSCAN_predicted_peptide_6|129_aa
MKKKQNRKTGNSKNQSTSPPPKERSSSPAMEQSWTENDFDELREEGFRQSNFCELKEEVR
THRKELKNHEKRSDEWLTRITNAEESLKDPMELKTTPRELRDECTSFSSQFDQLEEKVSV
IEDQMNEMK

>gi568815590r:16010088_16277988|GENSCAN_predicted_CDS_6|390_bp
atgaagaaaaaacagaacagaaaaactggaaattctaaaaatcagagcacctctcctcct
ccaaaggaacgcagctcctcaccagcaatggaacaaagctggacagagaatgactttgac
gagttgagagaagaaggcttcagacaatcaaacttctgtgagctaaaggaggaagttcga
acccatcgcaaagaacttaaaaaccatgaaaaaagatcagatgaatggctaactagaata
accaatgcagaggagtccttaaaggacccgatggagctgaaaaccacaccacgagaacta
cgtgacgaatgcacaagcttcagtagccaattcgatcaactggaagaaaaggtttcagtg
attgaagatcaaatgaatgaaatgaagtga

>gi568815590r:16010088_16277988|GENSCAN_predicted_peptide_7|269_aa
MGKHVSQNYGRLTGFSPRPCRQLHEHHPHPGQAKAKSATSTTSHLPLALQPTGVRERSEE
NGINLENIFQDIIKNFHNLAVQVNIQIQEMWRTPVKYSMRRSSSRHIIIKFFRIKTEEKM
LRAAREKAQVTYERKPIRKGKIRSFSDKQMLREFVTTRAALQNRLKETLNIEGKNYYQPL
RKHTEVHRPVILQRNHRQNQEEMEILNSQKKAHSQMDSTLNSTIGSLMRTRDVQSSPGVE
TKSLHHRFDENWRFERQPPQKIMESLVNL

>gi568815590r:16010088_16277988|GENSCAN_predicted_CDS_7|810_bp
atgggtaagcatgtgagtcaaaactacggaagactgactgggttcagcccgaggccctgc
agacagctccacgagcatcaccctcatcctggtcaggctaaagctaaaagtgcaacttct
accacctctcatctccctctagccctgcagcctactggggtacgtgaaagaagtgaggag
aatggaatcaatttggaaaacatatttcaagatatcatcaagaacttccataacctagct
gtacaggtcaacattcaaattcaggaaatgtggagaaccccagtaaaatactccatgaga
agatcatcctcaagacacataatcatcaaattcttcaggatcaaaacggaagaaaaaatg
ttaagggcagccagagagaaagcccaggtcacctatgaaaggaagcccataagaaaagga
aaaataagatctttttcagacaagcaaatgctgagggaatttgtcaccaccagagctgcc
ttacaaaatcgcctgaaggaaacactaaatatagaagggaaaaattattaccaaccacta
cgaaaacacactgaagtacacagaccagtgatactacaaagaaaccacaggcagaaccag
gaagaaatggaaatcctgaacagccaaaaaaaggcccatagccagatggattccacgctg
aattctaccatagggagtctcatgcgcacgcgggatgttcaaagcagcccaggagtagaa
accaaaagtttacatcacaggtttgatgaaaattggcgatttgaaagacagcccccgcag
aagataatggaaagtttggtgaacctgtga

>gi568815590r:16010088_16277988|GENSCAN_predicted_peptide_8|95_aa
MLKIKKIGDEDFAFISKCKDPKVRTILLQGNGKETLSKMDHNIQDAVQVYCNFLFDPHLV
PGDGASEMAVIHVLTEKSKVMTGMNNGHTGLLPGL

>gi568815590r:16010088_16277988|GENSCAN_predicted_CDS_8|288_bp
atgctgaaaatcaagaaaattggagatgaggactttgcattcatcagtaaatgcaaagac
cccaaggttcgcaccattctcctccaggggaatggcaaagagactctctctaaaatggac
cacaacatccaggatgctgtgcaagtttattgcaactttctttttgacccgcatttggtg
ccaggggatggggcctctgagatggctgtgatccatgtcttgacagaaaaatccaaggtc
atgactggtatgaacaatggccatacagggctgttacccgggttgtag