GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:14:03

Sequence gi568815591r:152548645_152776079 : 227435 bp : 45.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -    355    350    6                               1.05
 1.06 Term -   1973   1915   59  0  2   77   42    79 0.256   0.05
 1.05 Intr -   7429   7349   81  2  0  100   98    23 0.370   4.11
 1.04 Intr -   9146   9086   61  2  1   -1   86   106 0.350  -0.19
 1.03 Intr -  16418  16275  144  2  0   97   39    46 0.569   1.08
 1.02 Intr -  16918  16775  144  1  0   45   86    73 0.881   3.28
 1.01 Init -  17004  16945   60  0  0   82   94    14 0.534   1.75
 1.00 Prom -  21069  21030   40                               0.94

 2.05 PlyA -  23782  23777    6                               1.05
 2.04 Term -  26408  26239  170  0  2   93   50    95 0.690   4.24
 2.03 Intr -  27633  27436  198  1  0   89   22   124 0.370   5.22
 2.02 Intr -  58755  58699   57  1  0   59  116    57 0.049   4.46
 2.01 Init -  81112  80395  718  1  1   33   40   334 0.302  18.13
 2.00 Prom -  86937  86898   40                              -3.26

 3.05 PlyA -  87379  87374    6                               1.05
 3.04 Term -  98877  98633  245  1  2  -21   28   215 0.656   0.66
 3.03 Intr - 100368 100159  210  1  0   41   56   162 0.111   7.18
 3.02 Intr - 112138 112057   82  1  1   78   53    74 0.025   2.11
 3.01 Init - 121181 121065  117  2  0  100  131   -16 0.015   4.10
 3.00 Prom - 122267 122228   40                              -3.56

 4.00 Prom + 137174 137213   40                              -3.26
 4.01 Init + 151025 151089   65  1  2   95   77    63 0.914   6.57
 4.02 Intr + 156283 156425  143  1  2   90   60    48 0.623   2.20
 4.03 Intr + 180823 180945  123  2  0   41  101    49 0.004   2.06
 4.04 Intr + 181545 181729  185  1  2   56   35   107 0.004   1.71
 4.05 Intr + 186215 186269   55  1  1   98   94    16 0.013   1.75
 4.06 Intr + 198584 198650   67  0  1   82  115   -17 0.611  -1.64
 4.07 Intr + 200269 200887  619  1  1   67   53   324 0.239  19.12
 4.08 Term + 200954 201094  141  1  0  -20   36   200 0.607   1.93
 4.09 PlyA + 202369 202374    6                               1.05

 5.03 PlyA - 204268 204263    6                               1.05
 5.02 Term - 210685 210583  103  0  1   79   48    67 0.495  -0.45
 5.01 Init - 211240 211092  149  1  2   68   18   222 0.498  10.76
 5.00 Prom - 220927 220888   40                              -3.26


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 121049 121107   59  1  2  110  107     5 0.953   5.38
S.002 Intr + 127408 127538  131  1  2   68   13   148 0.953   5.64
S.003 Term + 128593 128612   20  2  2  104   47    38 0.886  -0.22
S.004 Term + 208438 208536   99  0  0   60   43    96 0.815   0.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:152548645_152776079|GENSCAN_predicted_peptide_1|182_aa
MESGFPDMYAWGTKWSAIPQKLQANVWREEGRGRVEGFKGECAESVLSNDRRKHASITEN
LVENDSNPRCQAVSCLGTCVVAIAMLRRFFLWFVTVAVFTIHIFLVFTNTWNYSTYGKNV
KDSFTEEGVCIETRDWGLLTPESKRQGSLWIPSILISFCRVEKGKFKKENHSVKEHFFYQ
QV

>gi568815591r:152548645_152776079|GENSCAN_predicted_CDS_1|549_bp
atggaatcggggttcccagacatgtatgcgtggggcacgaagtggagcgcgatcccgcag
aagctgcaagctaacgtctggagggaagagggaagaggcagggtagaaggctttaaggga
gaatgtgctgagagtgtcctgagcaacgacaggagaaaacatgccagcattaccgagaat
ttagtggagaatgacagcaaccccaggtgccaggctgtttcctgtctcgggacttgtgtg
gttgccattgctatgcttagaagatttttcctctggttcgtcaccgtggctgttttcacc
atccacatcttcctagtgtttactaatacctggaattattctacgtatgggaagaacgtg
aaggactccttcacggaggagggcgtttgcattgagacccgggattgggggctcctcaca
ccagaaagcaaaaggcaagggagcctgtggattccgtccatactgatcagtttctgccgg
gtggagaaaggcaagttcaagaaagagaaccattccgtgaaagagcacttcttctaccag
caggtctag

>gi568815591r:152548645_152776079|GENSCAN_predicted_peptide_2|380_aa
MKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRL
NQEEVESLNRPITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK
EGILPNSFYEANIIPIPKPGRDTTKKENYRLISLMNINAKILNKILANRIQQHIKELIHH
DQVGFIPGIQGWFNIHKSINIIQHINRTKNKNHMIVSIDAEKAFDKIQQPFKLKTLNKLA
RIIGNHRTPQSFKLCQPKGLPTPGCSDPPTIRGRMVNTRKCFRIVRPSNNKRAYGKHSQM
LSNSSLNGIINGLITLLSKLQLNIRFMAVLLSHCVNYRHSGKYLREEDLMEEAKPPTPRA
FTCAPLRLSVASAFRALKAL

>gi568815591r:152548645_152776079|GENSCAN_predicted_CDS_2|1143_bp
atgaagaaaagagagaagaatcaaatagacacaataaaaaatgataaaggggatatcacc
actgatcccacagaaatacaaactaccatcagagaatactataaacacctctacgcaaat
aaactagaaaatctagaagaaatggataaattcctggacacatacaccctcccaagacta
aaccaggaagaagttgaatccctaaatagaccaataacaggctctgaaattgaggcaata
attaatagcctaccaaccaaaaaaagtccaggaccagacggattcacagccgaattctac
cagaggtacaaggaggagctggtaccattccttctgaaactattccaatcaatagaaaaa
gagggaatcctccctaactcattttatgaggccaacatcatcccgataccaaagcctggc
agagacacaacaaagaaagagaattatagactaatatccctgatgaacatcaatgcaaaa
atcctcaataaaatactggcaaaccgaatccagcagcacatcaaagagcttatccaccat
gatcaagtgggcttcatccctgggattcaaggctggttcaacatacacaaatcaataaac
ataatccagcatataaacagaaccaaaaacaaaaaccacatgattgtctcaatagatgca
gaaaaggcctttgacaaaattcagcagcccttcaagctaaaaactctcaataaattagcc
agaatcatcggcaaccacaggacacctcagtccttcaagctttgtcaacccaaaggcctc
ccaactcccggctgctccgaccctccaacgatacgagggcgtatggtaaacactcgcaaa
tgctttcgaatagtccgaccctccaacaataagagagcatatggtaaacactcgcaaatg
ctttcgaatagttcactgaatggaataattaatggattaatcactctgctgagtaaattg
cagctgaacataaggtttatggcggttctgctctcccactgtgttaattacaggcactct
ggaaagtacctgcgggaagaggacctaatggaagaagcaaagccacccacacccagagcc
ttcacctgtgctcctctcaggctttctgtggcttctgcttttagagctctaaaagccctc
tga

>gi568815591r:152548645_152776079|GENSCAN_predicted_peptide_3|217_aa
MPGLPISFVENSNCVGYIFISLALTSVPGTYLTCMKCSPLLARLEGRSSLKEIEPNLFAD
EDSPVHDRVNGGESVNLQESTLRKCSQCLEKLVNDYRLVLFATTQTIMQKASSSSEEPSH
ASRRLCDVDIDYRPYLLKILEDNPGSTIQDIGTGKDFMTKTPKTIATEAKIHKWDLIKLK
SCTAKETIKRVNRQLTEWEKIVANYASEKGLKSSIYT

>gi568815591r:152548645_152776079|GENSCAN_predicted_CDS_3|654_bp
atgcctggcctccccatcagttttgttgaaaacagcaactgtgttggctacatctttata
tccctagcacttacctcagttcctggaacatacttgacttgcatgaaatgttcaccgctc
cttgcccgacttgaaggtagaagttccttgaaagaaatagaaccaaatctgtttgctgat
gaagattcacctgtgcatgaccgcgtcaatggaggagaaagtgtgaacttacaggagtct
actctgaggaaatgttctcagtgcttagagaagcttgtaaatgactatcgcctggttctt
tttgcaacgacacaaactataatgcagaaagcctcgagctcatcagaagaaccttctcat
gcctctcgacgactgtgtgatgtggacatagactacagaccttatctcttaaaaatcctg
gaagacaacccaggcagtaccattcaggacataggcacaggcaaagatttcatgacgaag
acgccaaaaacaattgcaacagaagcaaaaattcacaaatgggatctaattaaactaaag
agctgcacagcaaaagaaactatcaagagagtaaacagacagcttacagaatgggagaaa
attgttgcaaactatgcatctgagaaaggtctgaaatccagcatctatacgtaa

>gi568815591r:152548645_152776079|GENSCAN_predicted_peptide_4|465_aa
MALAITRGQQTWTGPQQLEGAWCALAIVPSTRSTLSAESKNCLAEKIKFMFECYIFVALR
NKHFAFLAKGVKLQTFAVSVTALKAASGVVPSSRWAPGLAGLRTEAADLRDSGAQLASAS
GSRTGAAGGAARQSCAVRSHSSALGWSMGLGAMEQGVVLVGEAGATQEPMEWTKVLGFRE
NAEPAPGDSATTISVSVFHMWSKTILHLPVWPRVSGRGHRDAKTAAWTFDDHAVPGGTFC
HCHSGPLSEECSLPRSRGIVGNKDLSPRQPHLAPLPPFPENGGKVRLGLILEEFLRFLYL
KAGVTGPCVLGTGLILYALSKEIYVIIAETFSTISVVGLPVYAIKKYGASVAEFAGKLNE
QKLAQLEEAKQAPIKQIRDGIDLEKSQQALVQKRHYLFDVQRNNIAMALEVTYQELLYKE
QEHMINWVEKYVVQSISAQQEKETIAKCIEDLKLLAKKAQAQPAM

>gi568815591r:152548645_152776079|GENSCAN_predicted_CDS_4|1398_bp
atggcattggccatcaccagaggtcagcagacctggacagggccacagcagctggaagga
gcttggtgtgctcttgccattgttccatctacaagaagcaccctttctgcagaaagtaaa
aattgccttgctgagaaaattaaatttatgttcgagtgctatatctttgtggcactgagg
aataagcattttgcatttctagcaaagggagtgaagctgcagaccttcgcggtgagtgtt
acagctcttaaggcagcgtctggagttgttccttcttcccggtgggctcctggtcttgct
gggctcaggactgaagctgcagatcttcgcgactcaggagcccagctggcttcagctagt
ggatcccgcaccggggctgcaggtggagctgcccgccagtcctgcgccgtgcgctcgcac
tcctcagcccttgggtggtcgatgggactgggtgccatggagcagggggtggtgctcgtc
ggggaggctggggccacacaggagcccatggagtggacgaaagtattaggtttcagggag
aatgcggaacctgccccaggtgactcagctactaccattagtgttagtgtatttcacatg
tggtccaagacaattcttcatcttccagtgtggcccagagtctccggtcggggtcacagg
gatgctaagactgctgcctggaccttcgatgaccacgctgtcccgggtggaactttctgc
cactgccacagtggccccctctctgaagaatgcagccttcctaggtccaggggtattgtg
ggcaacaaggacctttcacccaggcagccacaccttgcccctctaccaccttttcctgaa
aatggaggaaaagttcgtcttggactgatccttgaggaattcctcaggtttctttatctt
aaagccggtgtaacaggaccctgtgtgctcggaactgggcttatcttgtatgctttatcc
aaagaaatatatgtgattattgcagagaccttctcgaccatatcagtagtagggttacct
gtctatgcaattaaaaaatatggtgcctctgttgcagaatttgctggtaaactcaatgag
caaaaacttgcccaactagaagaggcgaagcaggctcccatcaaacaaatccgggatgga
attgatttggagaagtcacagcaggcactagttcagaagcgccattacctttttgatgtg
cagaggaataacattgctatggctttggaggttacttaccaggaactactgtataaagaa
caagagcacatgatcaattgggtggagaagtacgtggtgcagagcatctctgcacagcag
gaaaaggagacaattgccaagtgcattgaagacctaaagcttctggcaaagaaggctcaa
gcacagccagctatgtaa

>gi568815591r:152548645_152776079|GENSCAN_predicted_peptide_5|83_aa
MLGTRGARPRRQPESAPSPSAPPPASPARSVSREPPQRRCREPGCSAADTIGLESVLITI
DEQQVLSTVFGVPVEVPKCLLND

>gi568815591r:152548645_152776079|GENSCAN_predicted_CDS_5|252_bp
atgctcgggacgcgcggcgctcggccccgccggcagcccgagagcgccccgtcgccgtcc
gctccgccgcccgctagccccgcgcgcagcgtctcccgcgagccgccgcagcgccgctgc
cgggagcccggatgctcggcggccgacacgatagggcttgagtctgtcttaatcactatt
gatgagcagcaggtgcttagcacagtatttggtgtacctgtggaagtgcccaaatgtttg
ttgaatgactga