GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:52:00

Sequence gi568815591r:151460522_151695456 : 234935 bp : 44.46% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    383    492  110  1  2   54   94    95 0.608   6.44
 1.02 Term +   6021   6177  157  0  1   68   42   161 0.704   6.91
 1.03 PlyA +   6235   6240    6                               1.05

 2.08 PlyA -   6308   6303    6                              -3.24
 2.07 Term -   6690   6598   93  0  0  127   37    90 0.694   5.63
 2.06 Intr -  10131  10050   82  2  1   71   92    68 0.629   5.14
 2.05 Intr -  11084  11028   57  1  0   81   98    22 0.381   0.50
 2.04 Intr -  16894  16812   83  1  2  110  116    22 0.599   5.64
 2.03 Intr -  24283  24216   68  2  2  110  108    30 0.882   5.82
 2.02 Intr -  30493  30422   72  2  0   85   98    79 0.156   7.98
 2.01 Init -  58990  58939   52  1  1  104   92    79 0.453  11.44
 2.00 Prom -  70674  70635   40                              -3.86

 3.00 Prom +  73507  73546   40                              -4.26
 3.01 Init +  78864  79066  203  2  2  107   86    95 0.943   9.55
 3.02 Intr +  82280  82384  105  2  0   57   37   113 0.619   2.43
 3.03 Term +  92954  93065  112  2  1  103   54    77 0.353   3.83
 3.04 PlyA +  95373  95378    6                               1.05

 4.20 PlyA -  95510  95505    6                               1.05
 4.19 Term -  96390  96206  185  1  2   56   33   101 0.633  -0.89
 4.18 Intr -  99302  99201  102  0  0  107   78     8 0.696   1.85
 4.17 Intr - 100096 100003   94  1  1  159   98   116 0.971  19.24
 4.16 Intr - 103703 103557  147  2  0   91   78   135 0.719  13.23
 4.15 Intr - 104862 104825   38  1  2   99   87    16 0.994   0.58
 4.14 Intr - 105364 105199  166  1  1   57   72   211 0.984  15.93
 4.13 Intr - 108321 108195  127  2  1   84   78    88 0.978   8.08
 4.12 Intr - 109704 109650   55  1  1   62   92    37 0.646  -0.46
 4.11 Intr - 115931 115850   82  2  1  112   87    41 0.484   5.61
 4.10 Intr - 134933 134824  110  0  2  107  108    55 0.216   9.40
 4.09 Intr - 144346 144225  122  0  2   16   41   120 0.001   0.24
 4.08 Intr - 149211 149156   56  0  2   68   81    51 0.048   0.18
 4.07 Intr - 152298 152165  134  1  2   97  105    31 0.687   6.06
 4.06 Intr - 153681 153579  103  0  1   67   44    36 0.073  -3.15
 4.05 Intr - 164839 164706  134  2  2  101   66    38 0.048   3.26
 4.04 Intr - 171617 171362  256  2  1  144   38   288 0.639  26.42
 4.03 Intr - 215116 214899  218  2  2  115   97   111 0.762  12.92
 4.02 Intr - 215835 215783   53  2  2   75   54    -1 0.430  -6.25
 4.01 Init - 217326 217271   56  0  2   71   72    67 0.640   4.16
 4.00 Prom - 222037 221998   40                              -5.46

 5.00 Prom + 224909 224948   40                              -6.36
 5.01 Init + 227053 227141   89  0  2   83   57    31 0.179  -0.39
 5.02 Intr + 227242 227335   94  1  1   67   90    70 0.810   5.07
 5.03 Intr + 229105 229267  163  0  1  100   50    69 0.458   3.85
 5.04 Term + 232907 232980   74  0  2  114   54    50 0.335   2.27
 5.05 PlyA + 234811 234816    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  42645  42942  298  0  1   35   42   237 0.851   8.54
S.002 Term -  68469  68360  110  1  2   77   48    98 0.944   3.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:151460522_151695456|GENSCAN_predicted_peptide_1|88_aa
MAALQDSGATHSTDCCWRYTIMGTREAAETHGDPDTRPLRRESTVSSHLSTPPPVATSSL
VSGIQPGAFLKPSEKLRTRLLFFESHIK

>gi568815591r:151460522_151695456|GENSCAN_predicted_CDS_1|267_bp
atggcagcactgcaggattccggagccacccacagcaccgactgctgctggagatacaca
atcatgggcactcgtgaagctgcagaaactcacggggaccctgacaccaggccactgcgc
agggagtccacggtcagcagccacctcagcacacctcctcctgtggccacatcttcactg
gtttctggaatccaacctggggccttcctgaagccaagtgagaaactcaggacaaggctt
ctcttctttgaaagccacatcaagtag

>gi568815591r:151460522_151695456|GENSCAN_predicted_peptide_2|168_aa
MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVD
TAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQVISYEEGKA
LAESWNAAFLESSAKENQTAVDVFRRIILEAEKMDGAASQGKSSCSVM

>gi568815591r:151460522_151695456|GENSCAN_predicted_CDS_2|507_bp
atgccgcagtccaagtcccggaagatcgcgatcctgggctaccggtctgtggggaaatcc
tcattgacgattcaatttgttgaaggccaatttgtggactcctacgatccaaccatagaa
aacacttttacaaagttgatcacagtaaatggacaagaatatcatcttcaacttgtagac
acagccgggcaagatgaatattctatctttcctcagacatactccatagatattaatggc
tatattcttgtgtattctgttacatcaatcaaaagttttgaagtgattaaagttatccat
ggcaaattgttggatatggtggggaaagtacaggtgatcagttatgaagaagggaaagct
ttggcagaatcttggaatgcagcttttttggaatcttctgctaaagaaaatcagactgct
gtggatgtttttcgaaggataattttggaggcagaaaaaatggacggggcagcttcacaa
ggcaagtcttcatgctcggtgatgtga

>gi568815591r:151460522_151695456|GENSCAN_predicted_peptide_3|139_aa
MDAGITEEWSDGERPPPTAVLGVMAERAGEQGCIPNRVPVLSTFVCRRLAVQLPDRSLFL
FSTTLSLRARVQEMYSEEAQMDSSLLWDQDTLKEFKVFKEEHSSGKSATSAGPGSGHFFP
IGPKGTGEDGDSRKGRKLI

>gi568815591r:151460522_151695456|GENSCAN_predicted_CDS_3|420_bp
atggatgcggggatcacggaggagtggagtgatggggagcgaccaccgcccactgctgtt
cttggggtgatggcagaaagagcaggagagcagggctgtatccccaacagggttcctgtt
ctaagcacgtttgtgtgcaggaggctggctgtgcagctgcctgaccgttctctgtttctt
ttcagtacaaccctgtcactaagggctagagtccaggagatgtactcagaagaggcacag
atggattctagtctcctgtgggatcaggacacattgaaagaattcaaggtcttcaaagag
gaacacagctcaggcaagtcggccacaagtgcagggcccggctccggccacttcttcccc
attggcccaaagggcacaggtgaggacggggacagcaggaaaggaaggaagctgatctga

>gi568815591r:151460522_151695456|GENSCAN_predicted_peptide_4|745_aa
MWWKKIDGQKKESDHRKRNEVLLLGTYSGDVHVARFASGLSSSPSTPTQVTKQHTFPLES
YKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPAE
AGMLEKLEFEDEGECAPPAAGPALPRPGRPRTGTRGDPAPHLRRCPTASCVLRKPRGRGG
NRGGDAGAGELGLRATLAFISFLKLPCSSRPARLYTDSSCSLNHSFLSFGHLLVFSKSQT
QLETASPPLTGRVGVLAGALSIAVGTGHLLVGSSLGLVTASGYCTISWGSPCTCAFGNGP
IDGHSLSIILEMGLCTMKTKQEFQDWTKRSVELEGGNASSELQSFQGHHNKEGLRNCRSQ
EEPEEMLPTIMWNPGRDPVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFF
ALVANGVRAAPLWESKKQSFVELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVID
PISGNALYILTHKRILKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKAL
NIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVV
KCNKLEILETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQALILTPAAPVKYEQPSL
CQGHMDPMWEQTACPLNSQNPILNEFTGMEQVMWHKVSARYVQITVPYVRIQQYVTAAAG
AHACETTPSLNVEVFEPFTKSVCFL

>gi568815591r:151460522_151695456|GENSCAN_predicted_CDS_4|2238_bp
atgtggtggaagaagattgatggacagaaaaaggaaagtgaccacagaaagcggaatgaa
gtcttgctactgggaacttacagtggtgatgttcatgttgcacgttttgcctccggcctc
tcctcctctccgtcaacacccacccaagtgaccaagcagcacacgtttcccctggaatcc
tataagcacgagcctgaacggttagagaatcgcatctatgcctcgtcttcccccccggac
acagggcagaggttctgcccgtcttccttccagagcccgaccaggcctccactggcatca
ccgacacactatgctccctccaaagccgcggcgctggcggcggccctgggacccgcggaa
gccggcatgctggagaagctggagttcgaggacgaaggtgagtgcgccccgcccgctgcc
ggcccggcgctcccacggcccggccgcccgaggaccgggacccgcggggaccccgcgccc
catctccggcgctgccccacggcgagctgcgtcctgcggaagcccaggggccggggcggg
aaccggggcggggatgcgggcgccggcgagctcgggctgcgggctactctggccttcatc
agcttcctcaaactgccttgctcctccaggcctgccagactttacacagacagctcctgc
tccttgaatcattccttcctctcctttggccacctgctcgttttctccaagtctcagaca
cagctggagacagcgtcacctcccctgacaggccgtgttggagtgctggctggggcgctc
agcatagccgtgggaacggggcacctcctggtcggctccagtctagggctggtaacagct
tcaggttattgcactatttcttggggttccccatgcacctgtgcctttgggaatggtccc
atagacggtcactcgctgagcatcatcttagaaatggggctgtgcactatgaagactaaa
caagagttccaggactggaccaaaagaagtgtggaacttgagggtgggaatgcctcatca
gaacttcaaagcttccaaggccatcacaacaaggagggtctgagaaactgtcgcagccag
gaggagcccgaggagatgctcccgaccatcatgtggaatcctggacgggatccagtagaa
gactcagaaagtggtgtttacatgcgattcatgaggtcacacaagtgttatgacatcgtt
ccaaccagttcaaagcttgttgtctttgatactacattacaagttaaaaaggccttcttt
gctttggtagccaacggtgtccgagcagcgccactgtgggagagtaaaaaacaaagtttt
gtagagctttatttacaagaaacatttaagcctttagtgaatatatctccagatgcaagc
ctcttcgatgctgtatactccttgatcaaaaataaaatccacagattgcccgttattgac
cctatcagtgggaatgcactttatatacttacccacaaaagaatcctcaagttcctccag
ctttttatgtctgatatgccaaagcctgccttcatgaagcagaacctggatgagcttgga
ataggaacgtaccacaacattgccttcatacatccagacactcccatcatcaaagccttg
aacatatttgtggaaagacgaatatcagctctgcctgttgtggatgagtcaggaaaagtt
gtagatatttattccaaatttgatgtaattaatcttgctgctgagaaaacatacaataac
ctagatatcacggtgacccaggcccttcagcaccgttcacagtattttgaaggtgttgtg
aagtgcaataagctggaaatactggagaccatcgtggacagaatagtaagagctgaggtc
catcggctggtggtggtaaatgaagcagatagtattgtgggtattatttccctgtcggac
attctgcaagccctgatcctcacaccagcagccccagtcaaatatgaacaacccagcctt
tgtcagggccacatggacccgatgtgggagcaaacagcatgccctttgaactctcagaat
ccaatattaaacgaattcactggtatggaacaggtgatgtggcataaggtgagtgcacgg
tatgttcagatcacagtgccttatgtccgaatacagcaatatgtcaccgccgcagccggg
gcgcacgcgtgtgaaacaacaccgagcttgaatgtggaagtctttgaaccttttaccaaa
tcagtttgttttctttag

>gi568815591r:151460522_151695456|GENSCAN_predicted_peptide_5|139_aa
MRIIGGKNGHDLGQTSQNLIFGGGSAGSERRFLTVTSSLWNVGEKTVCMGDRKKHTVAPG
EVSQEARWRLQPVADTPFLGCWLQPAAMGLQPGLSWGSVDSTHHLTPPRQALWVSGPSPP
RAISSHARPTRGFYAMAAP

>gi568815591r:151460522_151695456|GENSCAN_predicted_CDS_5|420_bp
atgagaatcataggtggtaagaatgggcatgaccttggacaaacatctcagaacctcatt
ttcggtggaggaagtgcaggctctgagaggaggtttctgacggtgacctcatccctgtgg
aatgttggggagaagaccgtttgtatgggcgacaggaaaaagcacacggtcgcaccaggc
gaggtctcccaggaggccaggtggcggctgcagccggtggcagacactcccttcctgggg
tgctggctgcagccggctgccatgggactccaaccagggctctcctggggttctgttgac
tcaacacatcatctgacgccaccccggcaggccctctgggtgtcaggcccatcacctccc
cgggccatcagcagccacgctaggcccacgagagggttctatgcaatggctgcaccttga