GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:16:43

Sequence gi568815591r:129734940_130052555 : 317616 bp : 46.05% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9217   9290   74  1  2   97   94    41 0.251   4.65
 1.02 Term +  20079  20242  164  1  2  119   44   245 0.928  21.30
 1.03 PlyA +  22114  22119    6                               1.05

 2.00 Prom +  22761  22800   40                              -6.56
 2.01 Sngl +  27461  27820  360  1  0   79   53   215 0.339  11.18
 2.02 PlyA +  28331  28336    6                               1.05

 3.08 PlyA -  28604  28599    6                               1.05
 3.07 Term -  34846  34685  162  1  0   45   48   102 0.373  -0.16
 3.06 Intr -  35584  35370  215  2  2  118   36    61 0.238   2.33
 3.05 Intr -  37209  37097  113  2  2  106   31    65 0.324   2.62
 3.04 Intr -  39661  39586   76  2  1   97   32    59 0.211  -0.23
 3.03 Intr -  43926  43787  140  2  2  101   55    55 0.685   3.61
 3.02 Intr -  44666  44150  517  0  1   95   65   107 0.242   1.12
 3.01 Init -  44953  44851  103  1  1   56  109    90 0.620   6.35
 3.00 Prom -  47000  46961   40                              -4.06

 4.00 Prom +  48663  48702   40                              -6.76
 4.01 Init +  50769  50869  101  2  2   79   69   143 0.192   9.24
 4.02 Intr +  56071  56176  106  1  1   33   49    84 0.035  -0.78
 4.03 Term +  69781  69891  111  0  0  102   49    74 0.678   3.46
 4.04 PlyA +  72452  72457    6                               1.05

 5.00 Prom +  84062  84101   40                              -1.86
 5.01 Init +  89887  90011  125  0  2   36   75   142 0.408   5.45
 5.02 Intr +  90066  90169  104  0  2   65   68    35 0.105  -0.98
 5.03 Term +  99254  99369  116  0  2   84   44   131 0.933   7.03
 5.04 PlyA +  99639  99644    6                               1.05

 6.08 PlyA -  99658  99653    6                              -0.45
 6.07 Term - 100122  99998  125  1  2   76   39   221 0.960  14.55
 6.06 Intr - 104396 104268  129  0  0  101  116    62 0.673  10.97
 6.05 Intr - 131354 131182  173  1  2   89   38    66 0.052   1.29
 6.04 Intr - 141294 141180  115  1  1   77   29    66 0.053  -0.89
 6.03 Intr - 144703 144629   75  2  0   68   77    38 0.305   0.19
 6.02 Intr - 146032 145956   77  0  2   62  100    37 0.362   1.46
 6.01 Init - 150658 150594   65  1  2   60  113    12 0.536   1.52
 6.00 Prom - 151505 151466   40                              -3.06

 7.00 Prom + 213987 214026   40                              -0.96
 7.01 Init + 217229 217410  182  1  2   68   35   150 0.470   6.36
 7.02 Intr + 223593 223614   22  0  1  142   96    -5 0.496   3.25
 7.03 Intr + 228743 228843  101  1  2   37  103    65 0.250   1.81
 7.04 Intr + 259452 259476   25  0  1   71   96    53 0.017   2.43
 7.05 Term + 266576 266677  102  1  0   96   48    23 0.024  -2.62
 7.06 PlyA + 269024 269029    6                               1.05

 8.08 PlyA - 269041 269036    6                               1.05
 8.07 Term - 274001 273708  294  2  0    6   35   172 0.067  -0.99
 8.06 Intr - 287586 287380  207  0  0  119   81    98 0.993  11.47
 8.05 Intr - 288784 288572  213  1  0   93  109   128 0.991  14.31
 8.04 Intr - 294129 293963  167  1  2   81  101    20 0.192   2.28
 8.03 Intr - 306146 306012  135  0  0   41   95   109 0.406   7.44
 8.02 Intr - 313045 313011   35  0  2   44   44    33 0.066  -7.63
 8.01 Init - 316427 316282  146  2  2  104   77   105 0.332  10.60

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 266496 266544   49  2  1   87   94    51 0.822   6.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:129734940_130052555|GENSCAN_predicted_peptide_1|79_aa
XSVLLSGLFMADRAGRKWILTDKATGLVQIPVSMYQTVVTSLAQGNGPVQVAMAPVTTRI
SDSAVTMDGQAVEVVTLEQ

>gi568815591r:129734940_130052555|GENSCAN_predicted_CDS_1|240_bp
nnttctgtgttattgtcaggcctctttatggcagatcgtgcaggtcgcaagtggatcctg
actgacaaagccacaggcctggtccagatccctgtgagcatgtaccagactgtggtgacc
agcctcgcccagggcaacggaccagtgcaggtggccatggcccctgtgaccaccaggata
tcagacagcgcagtcaccatggacggccaagctgtggaggtggtgacattggaacagtga

>gi568815591r:129734940_130052555|GENSCAN_predicted_peptide_2|119_aa
MKTSWALLRSLGAGHSCGAVGHGRAEGPWPRGLPSMPTPTPPVGPSQCGPCLLAQPERHD
AGKRLRPAGAQHLPDCERGSPQMAWAKAARVRETRRGVTQSPSASRTQSRRRGRTRLAG

>gi568815591r:129734940_130052555|GENSCAN_predicted_CDS_2|360_bp
atgaagacttcgtgggccctgctgaggtccttgggagcagggcattcgtgcggggctgtg
gggcacggccgagctgagggtccctggcccaggggcctcccgtccatgccgacgcccact
cctcccgtaggacccagccagtgcgggccctgtcttctagcccagcctgaacgccacgat
gcagggaagcgcctgaggcctgccggggctcaacacctgcccgactgtgagcgcggaagc
ccgcagatggcctgggcgaaggcggcccgggtgcgggagacgcgacgcggggtcactcag
agcccgagcgcatcccgaacccagagccgccgtcgggggcgcacccgattggccggctga

>gi568815591r:129734940_130052555|GENSCAN_predicted_peptide_3|441_aa
MRLFPNRGRFCLASLVWTPRGAERRLCAQPGAGAGGGAHGAPGSRVRQWRLPSAQRCSRA
GAGAGAAAVRVRPVLARCLPARSLAGVGLRFAALVGSGGSARLGGGCGERRGPGAGPSSV
LSGLRGWFEAASVARSRPAQSLGESGSQTSRVPPLRGHSSREPRRTRMRHRSPPSTAPFL
LIALVAPRFPALPQDRRLDGLPLAPHRQGAAAPPRFAPVFAKLLRAKILRARWRILGPGH
SALRVRITLYLSPTHLAQLLCEGPALVGSQIALHCLGPRPLSQPLPSLRRVEMRSGTIDR
LQPQAADGARLVRPQLAQTEASPAPGGSCLPPPVFGNGRTHTGEVTGSGGSRLANYGART
QPAPCAQPAREGPAMLDLLFSARKEGTQVAHGLDLYASSIPLHGFVPPDASEPETKPPLT
FPELVFAVGAPLSRSRATGSE

>gi568815591r:129734940_130052555|GENSCAN_predicted_CDS_3|1326_bp
atgcggctctttccaaaccggggccgtttttgcctggcttctctggtgtggactccgcgc
ggagctgagaggcggctgtgcgcccagcctggagccggcgcaggcggaggcgcccacggg
gcgcctgggtcccgggtccgccagtggcgtctgcccagcgcccagcgctgttcccgggcg
ggggcgggggcgggagcggctgcggtccgagtgcggccggtgcttgcgaggtgcctaccc
gcgaggagtttggctggggtcgggctgcgtttcgccgccctggtgggctcaggcggaagc
gccaggctgggagggggctgcggagagcgccggggccccggagctggcccctccagcgtc
ttgtcagggctgcgcggctggttcgaggctgcttccgtggcccggagccgccccgcccag
tctctgggggaaagcggctctcagacctcccgtgtgcctccacttcgcggccactcatcc
cgggaaccccggcgcacgcgaatgagacaccgttccccgccctcaactgccccattcctg
ttaatagcgctagtggcacccaggttcccagcccttccccaagatcggcggctggacggc
ttgcctctggcgcctcaccggcaaggtgcggcggcgcctcccaggtttgcgcccgtcttc
gcaaagctcctgagggcgaaaatcctgcgagccaggtggcggattctcgggccgggtcac
tcagctctacgggtgcgcatcaccctctacctgtcacccacccatctggctcagctgctg
tgtgagggcccagcgctggtgggcagccagatcgccttacactgcctggggccacggcca
ttatcccagcctctgcccagcctcaggcgggtcgaaatgcgatccggcaccattgatcgc
ctgcagccccaggctgccgatggagcccggctggtgcggccacagctggcacagaccgag
gcctccccagctcctggggggagctgcttgcctccccccgtttttggcaatggtagaact
cacactggtgaggtaacaggatccggtggttctagacttgccaactatggggcgaggact
cagccggcaccctgtgcacagccagcgagggaagggccggccatgctggacctgctgttc
tccgcgaggaaggaggggactcaggtggcccatgggctggacctctatgcctccagcatt
ccacttcatggatttgttcctcctgacgcctcagaacctgagacaaagcctccactcacc
ttcccagagcttgtgtttgcagtgggagctcccctgagccggagccgggccacagggtca
gagtga

>gi568815591r:129734940_130052555|GENSCAN_predicted_peptide_4|105_aa
MRSVQDLGVPFSLHPRLTAGSSPDAYRLFAPSLSAFMDIISSDSQDNPILRVRKLRLGEI
EWLAQAIQLLCIEMKRNTNQRCLLNVLGVSCSHHHFIERFLDGKR

>gi568815591r:129734940_130052555|GENSCAN_predicted_CDS_4|318_bp
atgcgctctgtccaggacctaggagtccctttctccctccaccctcggctcacagcgggc
agctcccccgacgcgtaccgcctctttgcccccagcctgagtgctttcatggacatcatc
tcatctgattctcaggataaccccattttacgagtgagaaaactgagacttggagagatt
gagtggcttgctcaagccatccagctactctgcatcgaaatgaagagaaacacaaaccag
cgatgtctcctcaacgtcctgggcgttagctgttcccaccatcacttcatagagaggttt
ctggatgggaagcgttag

>gi568815591r:129734940_130052555|GENSCAN_predicted_peptide_5|114_aa
MRPAAAILSCTGSGHPQPAHALVVAKPQLLLAVGSGLRFPARASDRRQEEGARESPEGGR
RSLHSINLRRERPAGPGLDFTLYPKKKNWFRKHFPKFLQQNTVAAGPGSVKGSN

>gi568815591r:129734940_130052555|GENSCAN_predicted_CDS_5|345_bp
atgaggcctgccgcagccattctcagctgcaccgggtccgggcatccacagccggctcac
gcgctggtggtcgccaagcctcagctcttgctggctgttggttcagggcttcggttccca
gccagagcaagtgataggagacaggaagagggagctagagagagccctgaaggtggacgt
cgcagtcttcactcaatcaatctccgcagggaacgccctgcaggcccaggtctggatttc
acgctctaccccaagaaaaagaactggttcagaaaacacttccccaagtttctccaacag
aacactgtggctgcagggcctggtagtgtgaagggcagcaactga

>gi568815591r:129734940_130052555|GENSCAN_predicted_peptide_6|252_aa
MWAITGDHGKEKAWRIFFIKYTIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVD
LPDKYPFKSPSIENEILELNRFCMFDMTSVLKLGVPGILLDMTKATEDLYCPFLRLYITR
EKGRNRKEDPLLSLDLLNTHRISSEVPMTQGIESELLAWFLTQEETGPDLTNIFESFLPQ
LLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEALKEQEEGTGDSSSESSMS
DFSEDEAQDMEL

>gi568815591r:129734940_130052555|GENSCAN_predicted_CDS_6|759_bp
atgtgggctattactggggatcatgggaaagagaaggcttggaggatcttctttataaaa
tacaccatcgagagtaaacatgaggttacgatcctgggaggacttaatgaatttgtagtg
aagttttatggaccacaaggaacaccatatgaaggcggagtatggaaagttagagtggac
ctacctgataaataccctttcaaatctccatctatagaaaatgagatactagaattaaac
agattctgcatgtttgatatgaccagtgtattaaaactcggggtacctggcatcctgctg
gacatgacgaaggctacagaagatctttactgcccattcctcagactctatattaccaga
gagaaaggaagaaacagaaaagaggaccccttgttgagtttagatctcctgaacacacac
aggatcagttcagaagttcccatgacacagggcattgagagtgagctccttgcctggttc
ctcacccaagaagagacaggcccagatcttaccaatatatttgagtccttcctgcctcag
ttattggcctatcctaaccccatagatcctctcaatggtgacgctgcagccatgtacctc
caccgaccagaagaatacaagcagaaaattaaagagtacatccagaaatacgccacggag
gaggcgctgaaagaacaggaagagggtaccggggacagctcatcggagagctctatgtct
gacttttccgaagatgaggcccaggatatggagttgtag

>gi568815591r:129734940_130052555|GENSCAN_predicted_peptide_7|143_aa
MGSVVESEATGRAKRKKAVSGVQTSRRKVTGSGDTGRASSNAYFGVLRRKGELKRLSAPG
RAEPTLDQALYQGALLTTNQPGRTDVILLVAQMKNLTFKEVMLYALYVYQGKYSRYKYHI
DRYDAVCPLPANAGECVNKPTPG

>gi568815591r:129734940_130052555|GENSCAN_predicted_CDS_7|432_bp
atgggctcggtggtagagagtgaggcgactggtcgtgcaaaaagaaaaaaggccgtctcg
ggagtccaaacgtcgcggaggaaagtcacaggctctggggatacaggaagagcgagcagc
aacgcgtatttcggggtgctgcggagaaaaggcgagctgaaaaggctctcggcccctggg
agagctgagcccacccttgaccaggcactgtaccaaggtgcattacttacaaccaaccaa
cctggcaggacagatgttattctgcttgttgcacagatgaagaatcttacgttcaaagaa
gtcatgttatatgccctctatgtgtaccagggtaaatacagtagatataagtatcatatc
gatagatatgatgctgtatgtcccttacctgccaatgctggggagtgtgtaaacaagcca
acccctggctag

>gi568815591r:129734940_130052555|GENSCAN_predicted_peptide_8|398_aa
MAAPCEGQAFAVGVEKNWGAVVRSPEGTPQKIRQLIDEGIAPEEGGVDAKVHNLAADFHQ
SKPFELSPLVCAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRFYTNIIFQFTFSTDR
FGMLPLDEPAILVSEFLDRFQSLCHLDLQLPSLRPEDLKTMAEKSPGPIVSRTRSWDSSS
PVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFF
DPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVLTILLAHKQSSQPAETDS
MIWLQTVKSLVGPDNSSETQSLLCGKQNVNRGLRVFGKSAPRIRDGPGSSFSLSSIPCYT
RSHSLCPTGPQGALGSLAKSQHCPGPCSRSTVTGLNSH

>gi568815591r:129734940_130052555|GENSCAN_predicted_CDS_8|1197_bp
atggcggcgccctgtgagggacaagcgtttgccgtaggggttgaaaagaattggggtgca
gtagttcgctccccagaagggaccccccagaaaatccggcagctgatagatgaggggatt
gccccggaagagggaggcgtggacgcgaaagttcacaacttggcagctgacttccatcag
agtaagccctttgagctgtctccactcgtctgtgcaaaatatggctgggtcacagtggaa
tgtgatatgctcaagtgctctagctgtcaagcttttctctgtgccagtttacaaccagct
tttgactttgacagattttacaccaatataatcttccaatttactttttccacagaccga
tttgggatgttgcccctggatgagcctgctattcttgttagtgaattcctagatcgtttt
caaagcctttgtcacttggacctccagcttccttccctaaggccggaggacttgaaaact
atggctgaaaagagccctggtcccattgtctctcgaactcggagctgggactcttccagt
cctgttgaccgtcctgagccagaggctgctagccccaccaccagaactcgcccagtgacc
cgaagcatgggaacaggagacacccctggcctggaggtaccatctagccctctgcggaaa
gccaagcgagctcgcctctgctcctccagcagttcggacacatcttcccgaagcttcttt
gatcccacctctcagcatagagactggtgcccttgggtgaatatcacacttggcaaagaa
agcagggagaatggtggaactgaaccagatgccagcgccccagcagagccaggctggaaa
gcagtgctgaccatcctcttggcgcacaaacagtctagccagccagctgaaacggactcc
atgatctggctccaaacagtgaagagcctggtggggcctgacaacagttcagagacgcag
agcctcctctgtgggaaacagaatgtgaaccgaggccttagagtgtttggaaaatcagct
ccacgaatcagagatggaccgggcagcagcttctccctctcctccatcccatgctacacc
cgtagccactctctgtgccccactggtcctcagggggccctgggctctcttgccaagtct
cagcactgcccaggcccatgcagccggtcaacagtgactgggctcaactcccactaa