GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:30:14

Sequence gi568815592r:132488676_132689686 : 201011 bp : 37.89% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1875   2083  209  2  2   67   81   102 0.460   5.74
 1.02 Intr +  13255  13397  143  1  2  -23   66   167 0.197   2.48
 1.03 Intr +  15640  15723   84  2  0   51   94    91 0.462   4.87
 1.04 Term +  16525  16652  128  2  2   82   49    54 0.485  -1.64
 1.05 PlyA +  16932  16937    6                               1.05

 2.00 Prom +  22280  22319   40                              -4.55
 2.01 Init +  37349  37507  159  1  0   67    3   192 0.539   8.47
 2.02 Term +  37613  37765  153  1  0   99   48   106 0.259   4.64
 2.03 PlyA +  39672  39677    6                               1.05

 3.00 Prom +  43942  43981   40                              -6.05
 3.01 Sngl +  49615  50661 1047  0  0   65   42   259 0.889  15.89
 3.02 PlyA +  50715  50720    6                               1.05

 4.04 PlyA -  51116  51111    6                               1.05
 4.03 Term -  59701  59599  103  0  1   90   42    75 0.418  -0.13
 4.02 Intr -  59998  59865  134  1  2   75   69    84 0.262   3.72
 4.01 Init -  61819  61814    6  1  0   69  110     0 0.306   1.33
 4.00 Prom -  62106  62067   40                              -5.25

 5.00 Prom +  63682  63721   40                              -3.75
 5.01 Init +  64018  64593  576  0  0   92   87   347 0.297  30.18
 5.02 Intr +  68533  68563   31  0  1   71   90   -22 0.002  -6.91
 5.03 Term +  81564  82684 1121  1  2  104   47   291 0.301  17.79
 5.04 PlyA +  82774  82779    6                               1.05

 6.02 PlyA -  83012  83007    6                               1.05
 6.01 Sngl - 101011  99998 1014  1  0   18   37   616 0.985  46.26
 6.00 Prom - 101370 101331   40                              -8.75

 7.00 Prom + 101649 101688   40                             -11.24
 7.01 Init + 101910 101916    7  2  1   89   69     0 0.233  -0.68
 7.02 Intr + 106382 106650  269  0  2  -69   88   366 0.736  17.23
 7.03 Term + 111773 111826   54  1  0   65   48   119 0.894   2.18
 7.04 PlyA + 111851 111856    6                               1.05

 8.00 Prom + 115405 115444   40                              -5.45
 8.01 Init + 117388 117446   59  0  2   62   74    55 0.505   2.33
 8.02 Term + 119901 120102  202  0  1  110   42   241 0.813  17.58
 8.03 PlyA + 121388 121393    6                               1.05

 9.00 Prom + 125282 125321   40                              -5.35
 9.01 Sngl + 129132 129389  258  2  0   77   42   183 0.872   7.48
 9.02 PlyA + 130819 130824    6                               1.05

10.02 PlyA - 132448 132443    6                               1.05
10.01 Sngl - 138847 138590  258  1  0   62   47   171 0.773   5.28
10.00 Prom - 145849 145810   40                              -4.55

11.05 PlyA - 146133 146128    6                               1.05
11.04 Term - 146926 146563  364  0  1   87   48   186 0.332   7.55
11.03 Intr - 147367 147241  127  2  1   61   76    70 0.241   1.92
11.02 Intr - 167011 166856  156  2  0   67   43    80 0.000   0.46
11.01 Init - 187196 187073  124  2  1   81   49   141 0.765   9.88
11.00 Prom - 191546 191507   40                              -6.45

12.03 PlyA - 191709 191704    6                               1.05
12.02 Term - 193302 193180  123  0  0   18   53   118 0.639  -1.30
12.01 Intr - 195830 195660  171  2  0   84  110   124 0.939  13.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 175797 175934  138  2  0   63  116   104 0.993  10.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_1|187_aa
MTKFSKTCTYGQKQQKIAGPEQEAVWVGRRITGVAELHTVTSKSSEELIPPRVRMGRSRA
EKHRGLCWRRSDARGAKQSQRRWPVTNCSSSQCTIPTVPAVDNVVPGTVHFLVLPEIEEG
ERMTLPFQQPASQNRRDTEILPQEAGGGEIQSQGSDAKAIHACYHIELMPQKISGREEAT
VKYVSLL

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_1|564_bp
atgaccaaattctcaaaaacgtgtacatacggccaaaagcaacagaaaatagcaggtcct
gagcaggaagccgtatgggtggggcggagaataaccggggttgcagagctccacactgtc
accagcaaatcatcagaagagctgatcccacccagagtgagaatgggcagaagcagggct
gagaagcaccggggactctgctggagaagatctgatgccagaggagcaaagcagagccaa
cgccggtggcctgtgacaaactgcagcagttctcaatgtaccattcctacagtccctgct
gtggacaacgtggtgcctggcactgtgcacttccttgttcttccagaaatagaggaagga
gaacgaatgactctcccctttcagcagccagcatctcagaatagaagagacactgagata
ctgccacaggaggcaggtggaggtgagattcagtcccagggttctgatgccaaggctatc
catgcttgctaccacatagaactaatgccacagaagatttctggtagagaagaagccaca
gtgaagtatgtgtctttgctctaa

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_2|103_aa
MGDRIRQGQDHGIWELFPPQRGNLRAHGTGRKDPFVTDEWLPELLIQRRCNGWGNCLLFH
HFQRPHVETPGQKIIPPDSEWIKDDRQGPTGGKFEPCQCDIQC

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_2|312_bp
atgggtgaccggattaggcaaggacaggaccatgggatatgggaacttttccctccccag
aggggaaacttgagagctcatgggactggaagaaaagatccctttgtgactgatgagtgg
ctgcctgaacttttgattcagcgacgctgcaatgggtggggcaactgtctgctctttcat
catttccagagaccacatgttgaaactccaggtcagaaaatcattccacctgactctgag
tggatcaaagatgacagacagggcccaacagggggcaagtttgaaccttgccagtgtgat
attcagtgctag

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_3|348_aa
MVNNFSQAEAVELCYKNVNESCIKTPYSPGPRSILYAVLGFGAVLAAFGNLLVMIAILHF
KQLHTPTNFLIASLACADFLVGVTVMPFSTVRSVESCWYFGDSYCKFHTCFDTSFCFASL
FHLCCISVDRYIAVTDPLTYPTKFTVSVSGICIVLSWFFSVTYSFSIFYTGANEEGIEEL
VVALTCVGGCQAPLNQNWVLLCFLLFFIPNVAMVFIYSKIFLVAKHQARKIESTASQAQS
SSESYKERVAKRERKAAKTLGIAMAAFLVSWLPYLVDAVIDAYMNFITPPYVYEILVWCV
YYNSAMNPLIYAFFYQWFGKAIKLIVSGKVLRTDSSTTNLFSEEVETD

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_3|1047_bp
atggtgaacaatttctcccaagctgaggctgtggagctgtgttacaagaacgtgaacgaa
tcctgcattaaaactccttactcgccaggtcctcgatctatcctctacgccgtccttggt
tttggggctgtgctggcagcgtttggaaacttactggtcatgattgctatccttcacttc
aaacaactgcacacacctacaaactttctgattgcgtcgctggcctgtgctgacttcttg
gtgggagtcactgtgatgcccttcagcacagtgaggtctgtggagagctgttggtacttt
ggggacagttactgtaaattccatacatgttttgacacatccttctgttttgcttcttta
tttcatttatgctgtatctctgttgatagatacattgctgttactgatcctctgacctat
ccaaccaagtttactgtgtcagtttcagggatatgcattgttctttcctggttcttttct
gtcacatacagcttttcgatcttttacacgggagccaacgaagaaggaattgaggaatta
gtagttgctctaacctgtgtaggaggctgccaggctccactgaatcaaaactgggtccta
ctttgttttcttctattctttatacccaatgtcgccatggtgtttatatacagtaagata
tttttggtggccaagcatcaggctaggaagatagaaagtacagccagccaagctcagtcc
tcctcagagagttacaaggaaagagtagcaaaaagagagagaaaggctgccaaaaccttg
ggaattgctatggcagcatttcttgtctcttggctaccatacctcgttgatgcagtgatt
gatgcttatatgaattttataactcctccttatgtttatgagattttagtttggtgtgtt
tattataattcagctatgaaccccttgatttatgctttcttttaccaatggtttgggaag
gcaataaaacttattgtaagcggcaaggtcttaaggactgattcgtcaacaactaattta
ttttctgaagaagtagagacagattaa

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_4|80_aa
MQASLASAAGKKCGPWMTVSRCSCHLCEMPVSRFFDPLRHRSQKSEKQDEDFFRTFSQDG
SVSSFIYPCAPDENMERAGI

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_4|243_bp
atgcaggcatcacttgcttctgctgctggcaagaaatgtggtccatggatgacggtgtcc
cgctgctcctgtcacctctgtgagatgcctgtctccaggttttttgatcccctcaggcat
agaagtcagaagtcagaaaaacaagatgaagatttctttaggactttcagtcaagatggt
tcagttagttcattcatctacccctgtgctccagatgaaaatatggaaagagcaggcata
taa

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_5|575_aa
MTSNFSQPVVQLCYEDVNGSCIETPYSPGSRVILYTAFSFGSLLAVFGNLLVMTSVLHFK
QLHSPTNFLIASLACADFLVGVTVMLFSMVRTVESCWYFGAKFCTLHSCCDVAFCYSSVL
HLCFICIDRYIVVTDPLVYATKFTVSVSGICISVSWILPLTYSGAVFYTGVNDDGLEELV
SALNCVGGCQIISGRLLFSKHQGALKIRNNPVFFVIINKDKTSPYVNNSVMSSNSSLLVA
VQLCYANVNGSCVKIPFSPGSRVILYIVFGFGAVLAVFGNLLVMISILHFKQLHSPTNFL
VASLACADFLVGVTVMPFSMVRTVESCWYFGRSFCTFHTCCDVAFCYSSLFHLCFISIDR
YIAVTDPLVYPTKFTVSVSGICISVSWILPLMYSGAVFYTGVYDDGLEELSDALNCIGGC
QTVVNQNWVLTDFLSFFIPTFIMIILYGNIFLVARRQAKKIENTGSKTESSSESYKARVA
RRERKAAKTLGVTVVAFMISWLPYSIDSLIDAFMGFITPACIYEICCWCAYYNSAMNPLI
YALFYPWFRKAIKVIVTGQVLKNSSATMNLFSEHI

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_5|1728_bp
atgaccagcaatttttcccaacctgttgtgcagctttgctatgaggatgtgaatggatct
tgtattgaaactccctattctcctgggtcccgggtaattctgtacacggcgtttagcttt
gggtctttgctggctgtatttggaaatctcttagtaatgacttctgttcttcattttaag
cagctgcactctccaaccaattttctcattgcctctctggcctgtgctgacttcttggta
ggtgtgactgtgatgcttttcagcatggtcaggacggtggagagctgctggtattttgga
gccaaattttgtactcttcacagttgctgtgatgtggcattttgttactcttctgtcctc
cacttgtgcttcatctgcatcgacaggtacattgtggttactgatcccctggtctatgct
accaagttcaccgtgtctgtgtcgggaatttgcatcagcgtgtcctggattctgcctctc
acgtacagcggtgctgtgttctacacaggtgtcaatgatgatgggctggaggaattagta
agtgctctcaactgcgtaggtggctgtcaaattatttctggaagactactattctctaaa
catcagggagcactgaaaatcaggaacaatcctgtattttttgtgataatcaacaaggac
aaaacttctccatatgtaaataacagcgttatgagcagcaattcatccctgctggtggct
gtgcagctgtgctacgcgaacgtgaatgggtcctgtgtgaaaatccccttctcgccggga
tcccgggtgattctgtacatagtgtttggctttggggctgtgctggctgtgtttggaaac
ctcctggtgatgatttcaatcctccatttcaagcagctgcactctccgaccaattttctc
gttgcctctctggcctgcgctgatttcttggtgggtgtgactgtgatgcccttcagcatg
gtcaggacggtggagagctgctggtattttgggaggagtttttgtactttccacacctgc
tgtgatgtggcattttgttactcttctctctttcacttgtgcttcatctccatcgacagg
tacattgcggttactgaccccctggtctatcctaccaagttcaccgtatctgtgtcagga
atttgcatcagcgtgtcctggatcctgcccctcatgtacagcggtgctgtgttctacaca
ggtgtctatgacgatgggctggaggaattatctgatgccctaaactgtataggaggttgt
cagaccgttgtaaatcaaaactgggtgttgacagattttctatccttctttatacctacc
tttattatgataattctgtatggtaacatatttcttgtggctagacgacaggcgaaaaag
atagaaaatactggtagcaagacagaatcatcctcagagagttacaaagccagagtggcc
aggagagagagaaaagcagctaaaaccctgggggtcacagtggtagcatttatgatttca
tggttaccatatagcattgattcattaattgatgcctttatgggctttataacccctgcc
tgtatttatgagatttgctgttggtgtgcttattataactcagccatgaatcctttgatt
tatgctttattttacccatggtttaggaaagcaataaaagttattgtaactggtcaggtt
ttaaagaacagttcagcaaccatgaatttgttttctgaacatatataa

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_6|337_aa
MRAVFIQGAEEHPAAFCYQVNGSCPRTVHTLGIQLVIYLACAAGMLIIVLGNVFVAFAVS
YFKALHTPTNFLLLSLALADMFLGLLVLPLSTIRSVESCWFFGDFLCRLHTYLDTLFCLT
SIFHLCFISIDRHCAICDPLLYPSKFTVRVALRYILAGWGVPAAYTSLFLYTDVVETRLS
QWLEEMPCVGSCQLLLNKFWGWLNFPLFFVPCLIMISLYVKIFVVATRQAQQITTLSKSL
AGAAKHERKAAKTLGIAVGIYLLCWLPFTIDTMVDSLLHFITPPLVFDIFIWFAYFNSAC
NPIIYVFSYQWFRKALKLTLSQKVFSPQTRTVDLYQE

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_6|1014_bp
atgagagctgtcttcatccaaggtgctgaagagcaccctgcggcattctgctaccaggtg
aatgggtcttgccccaggacagtacatactctgggcatccagttggtcatctacctggcc
tgtgcagcaggcatgctgattatcgtgctagggaatgtatttgtggcatttgctgtgtcc
tacttcaaagcgcttcacacgcccaccaacttcctgctgctctccctggccctggctgac
atgtttctgggtctgctggtgctgcccctcagcaccattcgctcagtggagagctgctgg
ttcttcggggacttcctctgccgcctgcacacctacctggacaccctcttctgcctcacc
tccatcttccatctctgtttcatttccattgaccgccactgtgccatctgtgaccccctg
ctctatccctccaagttcacagtgagggtggctctcaggtacatcctggcaggatggggg
gtgcccgcagcatacacttcgttattcctctacacagatgtggtagagacaaggctcagc
cagtggctggaagagatgccttgtgtgggcagttgccagctgctgctcaataaattttgg
ggctggttaaacttccctttgttctttgtcccctgcctcattatgatcagcttgtatgtg
aagatctttgtggttgctaccagacaggctcagcagattaccacattgagcaaaagcctg
gctggggctgccaagcatgagagaaaagctgccaagaccctgggcattgctgtgggcata
tacctcttgtgctggctgcccttcaccatagacacgatggtcgacagcctccttcacttt
atcacacccccactggtctttgacatctttatctggtttgcttacttcaactcagcctgc
aaccccatcatctatgtcttttcctaccagtggtttcggaaggcactgaaactcacactg
agccagaaggtcttctcaccgcagacacgcactgttgatttgtaccaagaatga

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_7|109_aa
MTDEAEVKNGGGAEYDVTAAVDFAKEVSKIPAGLDGCDHTEGHDHTAQQKVSDGHGEDQE
VGRGVELLEVSDGNHYDHVAQHCHHYRPDHDQLNAQALNSPIGHEEELL

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_7|330_bp
atgacagatgaagcagaggtgaaaaatggaggtggtgcagagtatgatgtcacagcagct
gtggactttgcaaaagaggtctccaaaataccagcaggactcgatggatgtgatcacact
gaagggcatgaccacacagctcagcaaaaagtcagtgatggccatggagaggatcaagaa
gttggtcggggagtggagctgcttgaagtgagcgatggaaatcattacgatcatgttgcc
cagcattgtcatcactatagacccgatcatgaccagcttaatgcacaggctctgaactcc
ccaatcggccatgaggaggaactgctctga

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_8|86_aa
MVIKMVKVDTGEYKRGQGGKHMADDSSMLFGNDKDFAINTNHDGARGKETCSEQYCPPEF
VESKGTEIEASNKYLIALHTGNIGLR

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_8|261_bp
atggtcataaaaatggtaaaagtagacactggggaatacaagagaggacaaggagggaag
cacatggctgatgactcgagcatgctgtttggaaacgataaagattttgccataaatacc
aaccatgatggagccaggggtaaagaaacatgtagtgaacaatattgtcccccagaattt
gttgaaagtaagggcacagaaattgaagcaagcaacaagtatcttatagctctgcatacc
ggaaacatcggcctcagatag

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_9|85_aa
MKNGCYAKHQVKTIINLAKCKPKIPAVLHRSDHTIWHDGESQEEISDGHGEDEEVGWCVK
LLEVGNGNYHGKIAKYCDEYGSCHK

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_9|258_bp
atgaaaaatggatgttatgctaagcatcaggtcaaaactataataaatcttgcaaaatgt
aagcccaaaataccagcagttctccaccgatctgatcatactatatggcatgatggtgaa
tcccaggaggaaatcagtgatggccatggagaggatgaggaagttggttggtgtgtgaag
ctgcttgaagtaggaaatggaaattatcatggcaagattgccaaatattgtgatgaatat
ggatcctgccataaatga

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_10|85_aa
MSKDFMTKTPKAMATKANIDKWDLIKLRSFCTAKETIIRVNRKPTEWEKNFAIYPSDKGL
ISRVYEELKQIYKKKTTPSKSVQGL

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_10|258_bp
atgagcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagccaatattgac
aaatgggatctaattaaactaaggagcttctgcacagcaaaagaaactatcatcagagtg
aacaggaaacctacagaatgggagaaaaattttgcaatctatccatctgacaaagggcta
atatccagagtctacgaggaacttaaacaaatttacaagaaaaaaacaaccccatcaaaa
agtgtgcaaggactatga

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_11|256_aa
MGPTGSATSDGGNASKKQRKVTLQEKVELPDMDHRLWSTAAGSNRSDTVRKVKSDRVWGL
TSVFLMLLEAKPGGLLGAPGIQDQSGQLEIPPDESGTSTADLLEFAGGPLQTLFAWVSPA
KAAEQQKLLPAPSSGRDVLPIEEESREAVWLQLLFCAAVGCAQSKLPGGIVYTVRGKQPT
QASVTVDAPPNTKLECPRLTADCCAASENFKPVDLSLLGSMGEGPSEQDHLTPWLYPLFH
GSEWFCLAGIPGATGI

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_11|771_bp
atgggacccacaggaagtgccactagtgatggtggaaatgcttccaagaagcagagaaaa
gtcacattacaagaaaaagttgaattgcctgatatggaccatagattgtggtctacagct
gcaggcagcaatcggagtgatactgttagaaaagtcaaatcagatcgggtgtgggggctt
acttctgtattcctaatgcttttggaggccaagccaggaggattgcttggagccccaggc
attcaagaccagtctgggcaacttgaaatacctcctgatgagtcaggcacctctactgct
gatctgctggagtttgctgggggtccactccagaccctgtttgcctgggtatcaccagcc
aaggctgcagaacagcaaaaattgctgcctgctccttcctctggaagagatgtcctgccc
atagaggaggaatctagagaggcagtctggctacagctacttttctgtgctgcagtgggc
tgtgctcagtccaaacttccaggaggcattgtttacactgtgaggggaaaacagcctact
caagcctcagtaacggtggacgcccctcccaacaccaagctcgagtgtcccaggttgact
gcagactgctgtgctgccagtgagaatttcaagccagtggatcttagcttgctgggctcc
atgggagagggaccctctgagcaagaccacttgactccctggctttatccccttttccat
gggagtgaatggttctgtcttgctggcattccaggtgccactgggatatga

>gi568815592r:132488676_132689686|GENSCAN_predicted_peptide_12|97_aa
ICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQCCD
DGQLHSTDNSHALCKACPSAQESKALAVVIYASKTSF

>gi568815592r:132488676_132689686|GENSCAN_predicted_CDS_12|294_bp
atttgtaccctgttgaaatgtaaaacgactaatttaaacacttgcggtgactcagctgaa
acagcttctaccaggtttgaaatgttctccctcagtggcactttcggaacccagtatgtc
tttcctgaggtgttgctgagtgaaaatcagcttgcacctggagaatttcagtgctgtgat
gatggacaattacatagtaccgataacagccatgcactgtgcaaagcatgcccttctgca
caggagagcaaggcacttgcagtagtgatctatgccagcaaaacatcattttga