GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:49:20

Sequence gi568815592f:47607246_47818439 : 211194 bp : 38.86% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1878   2059  182  2  2   65  114   176 0.878  15.64
 1.02 Intr +   5228   5291   64  2  1   45   76    85 0.211   0.80
 1.03 Intr +   9564   9648   85  2  1   78   76     8 0.013  -2.93
 1.04 Term +  14963  15150  188  0  2   65   44   116 0.007   1.57
 1.05 PlyA +  15762  15767    6                               1.05

 2.04 PlyA -  16789  16784    6                               1.05
 2.03 Term -  24814  24574  241  0  1   41   41   159 0.299   1.01
 2.02 Intr -  26557  26433  125  1  2   52   44    71 0.347  -2.44
 2.01 Init -  28299  28144  156  0  0   89   93   107 0.827  11.26
 2.00 Prom -  28878  28839   40                              -3.65

 3.05 PlyA -  29637  29632    6                               1.05
 3.04 Term -  31739  30979  761  0  2    2   44   473 0.135  26.90
 3.03 Intr -  33801  33533  269  2  2   12   71   156 0.051   2.55
 3.02 Intr -  38380  38240  141  0  0   58   31   161 0.066   5.95
 3.01 Init -  53591  53539   53  2  2   59   72    56 0.050   1.78
 3.00 Prom -  55923  55884   40                              -3.75

 4.03 PlyA -  57735  57730    6                               1.05
 4.02 Term -  58985  58800  186  2  0   86   39   355 0.996  26.91
 4.01 Init -  59775  59743   33  0  0   64  110    20 0.970   1.72
 4.00 Prom -  64845  64806   40                              -3.25

 5.00 Prom +  68726  68765   40                              -6.55
 5.01 Init +  68899  68905    7  0  1   78   71     5 0.153  -1.33
 5.02 Intr +  71738  71889  152  0  2  116   75    59 0.681   6.36
 5.03 Intr +  72826  73059  234  0  0   89  109    73 0.942   6.46
 5.04 Intr +  74020  75381 1362  0  0   66  111   791 0.093  67.07
 5.05 Intr +  79747  79788   42  0  0  117   79    40 0.053   3.52
 5.06 Intr +  84589  84665   77  0  2   23   95    39 0.026  -4.51
 5.07 Intr +  86427  86503   77  0  2   91  105    46 0.075   4.84
 5.08 Intr + 100059 100093   35  1  2  109  106    20 0.651   2.92
 5.09 Intr + 100979 101033   55  1  1   49   95    45 0.764  -1.07
 5.10 Intr + 103490 103641  152  0  2  137   59    74 0.991   8.36
 5.11 Intr + 105112 105363  252  0  0   70   61   237 0.981  15.91
 5.12 Intr + 106553 107932 1380  1  0  101  111   888 0.975  80.59
 5.13 Intr + 110047 110106   60  0  0   80   99    40 0.703   2.31
 5.14 Intr + 129652 129786  135  0  0   51   53   127 0.016   5.34
 5.15 Intr + 150179 150276   98  1  2   63   83   121 0.281   6.99
 5.16 Intr + 161498 161556   59  2  2   63   92    42 0.050  -0.29
 5.17 Intr + 174799 174951  153  2  0   86   99    72 0.074   7.22
 5.18 Intr + 179270 179389  120  0  0   74   92    46 0.866   3.15
 5.19 Intr + 180762 180938  177  1  0   15   31   143 0.002   0.27
 5.20 Intr + 184563 184727  165  1  0   28  115   126 0.002   8.31
 5.21 Intr + 187984 188318  335  2  2   99  115   144 0.000  12.57
 5.22 Intr + 200909 201150  242  1  2   99   98   170 0.549  14.53
 5.23 Intr + 204429 204486   58  0  1   72   64    49 0.044  -1.13
 5.24 Intr + 210618 210748  131  2  2   86   92    56 0.041   4.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  74020  75441 1422  0  0   66   38   851 0.891  67.85
S.002 Init + 174822 174951  130  2  1   74   99    83 0.861   8.36
S.003 Term + 180762 181114  353  1  2   15   42   243 0.910   6.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:47607246_47818439|GENSCAN_predicted_peptide_1|172_aa
PSVYLSTPSSASKANTTAFLTPLEIKAKVETDDVKKNSLDELRAQIIELLCIVEALKKDH
GKELEKLRKDLEEEKTMRSNLEVRFTDAKFKVSSSVPATDHIFYHCHPVKALFPDSGRDG
LENLPQATCLLAAKEKGLVLPSPVESANQICRPTQSCGLEVSRPVQIVTKFS

>gi568815592f:47607246_47818439|GENSCAN_predicted_CDS_1|519_bp
ccatctgtgtacctttcaacaccttccagtgcttctaaagcaaatacaactgctttcctg
actccattagaaatcaaagctaaagtggaaacagatgatgtgaaaaaaaattccctggat
gaacttagagcccagattattgaattgttgtgcattgtagaagcactgaaaaaggatcac
gggaaagaactggaaaaactgcgaaaagatttggaagaagagaagacaatgagaagtaat
ctagaggttaggtttactgatgccaaattcaaggtctcttcttcagtgcctgcaacagat
cacattttttaccattgccaccctgtcaaagccctgtttccagacagtgggcgagatggg
cttgaaaacttgccccaggctacctgccttctagctgcgaaagaaaagggcttggttctt
ccctcgcctgtggagtctgcaaaccagatttgccgccctacccagagttgtggcctggag
gtctctcgccccgttcaaattgttacaaagtttagctag

>gi568815592f:47607246_47818439|GENSCAN_predicted_peptide_2|173_aa
MGDQATLPLKWSGRVPKTSLTKFQMSRLLVPVPSRCSATALILHGGLPGTALVALKMGKG
GHELRIASSLKKLEKARKGIFPLELPLEALILAQSTLQDKMEEREVPPENQGQEVANNTC
EKRFRTHCSNLGSKEPSRRQHPTEMTNKSKMVLLLLSDLFSQNSGPPFSLFPE

>gi568815592f:47607246_47818439|GENSCAN_predicted_CDS_2|522_bp
atgggtgatcaggccacgcttccactcaaatggagtgggcgagttccgaagaccagtctt
accaagtttcagatgtccagactcctagtgccagttccttcccggtgttcagccactgcg
ttgatcctccacgggggcctgccaggcactgctctggtggctttgaaaatggggaaaggg
ggccatgagctaagaattgccagcagcctaaagaagctggaaaaggcaaggaaaggaatt
ttccccctagagcttcctttggaagccttaattttagcccagagcacattgcaggacaaa
atggaggaacgggaggtgccaccagagaatcaaggacaggaagtggcaaataacacatgt
gagaaaaggttcaggactcactgcagcaacctggggtcaaaggagccctcaaggcgtcaa
catccaacagaaatgacaaacaagagcaagatggttttgttgctgctgtctgacttgttc
tcccagaactcagggcctcctttctccctcttccctgagtaa

>gi568815592f:47607246_47818439|GENSCAN_predicted_peptide_3|407_aa
MRKTSMDEASTVVASDKSHTWTSQLMGVTGAGLVVFFRVILQRLAKLLPSTYSSQSADVQ
GWSQRGRLTPHTAGSHSETKLPEERSGSNICRSAIFAVLQPPLVIPRQTGSGVDLQQTPT
DLQLRVLTVRRKTNKQKGHPQHNPISTSPSTKTKDHGAITLELRIKKLTQNCSTTRKLKN
LLLNVYWVRNEMKAEIKMFFETNENKDTTYQNLWDTFKAGSRGKFIALNAHKRKQERSKI
DTLTSQLKELEKQEQTHSKASRRQEITKIQAELKDIETQKTLQKISESRSWFFEKINKID
RLLARLIKKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLEIREEMDEFLD
TYTLPRLNQEEAESLNRSITGSEIEAIINSLPTKKSQGPDRFTSEFY

>gi568815592f:47607246_47818439|GENSCAN_predicted_CDS_3|1224_bp
atgagaaagacatccatggatgaagcctccacagtggtagcttctgacaagagtcatacg
tggactagtcagcttatgggtgtgactggagcagggcttgtcgtcttcttcagagtcatt
ttgcagaggttggcgaagctgctcccgtccacgtacagctcacagtctgctgatgttcaa
ggatggtctcagaggggccgactgacacctcacacagccgggagccactctgagacaaag
cttccagaggaacgatcaggcagcaacatttgccgttctgcaatatttgcagttctgcag
cctcctctggtgatacccaggcaaacagggtctggagtggacctccagcaaactccaaca
gacctgcagctgagggtcctgactgttagaaggaaaactaacaaacagaaaggacatcca
caacacaaccccatctctacgtcaccatcaacaaagaccaaagaccatggtgcaatcaca
ttagaactcaggattaagaaactcactcaaaactgctcaactacacggaagctgaaaaac
ctgctcctgaatgtctactgggtccgtaacgaaatgaaggcagaaataaagatgttcttt
gaaaccaatgagaacaaagacacaacataccagaatctctgggacacatttaaagcaggg
agtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaatt
gacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattcaaaagct
agcagaaggcaagaaataactaagatccaagcagaactgaaggacatagagacacaaaaa
acccttcaaaaaatcagtgaatccaggagttggttttttgaaaagatcaacaaaatcgat
agactgctagcaagactaataaagaagaaaagagagaagaatcaaatagacacaataaaa
aatgataaaggggatatcaccaccgatcccacagaaatacaaactaccatcagagaatac
tataaacacctctatgcaaataaactagaaattcgagaagaaatggatgaattcctggac
acatacaccctcccaagactaaaccaggaagaagctgaatccctgaatagatcaataaca
ggctctgaaattgaggcaataattaatagcctaccaaccaaaaaaagtcaaggaccagac
agattcacatccgaattctactag

>gi568815592f:47607246_47818439|GENSCAN_predicted_peptide_4|72_aa
MLTLISGPNQQVLLSVLIGHAKCWSSSLARRRRRGGIGGGGKEEEEEEEEEEEEEEEEEE
EEEERRKEEGED

>gi568815592f:47607246_47818439|GENSCAN_predicted_CDS_4|219_bp
atgttgactctgatatctggacccaatcaacaggtactcctgtctgtcctcattggacat
gcaaagtgctggtcatcatctctagcaagaagaagaagaagaggaggaataggaggagga
gggaaggaggaggaggaagaggaggaggaggaagaggaggaggaagaggaggaggaggaa
gaggaggaagaaagaaggaaggaggaaggagaagattaa

>gi568815592f:47607246_47818439|GENSCAN_predicted_peptide_5|1853_aa
MAGVCDGVCTDYSQCTQPCPPDTQGNMGFSCRQKTWHKITDTCQTLNALNIFEEDSRLVQ
PFEDNIKISVYTGKSETITDMLLQKCPTDLSCVIRNIQQSPWIPGNIAVIVQLLHNISTA
IWTGVDEAKMQSYSTIANHILNSKSISNWTFIPDRNSSYILLHSVNSFARRLFIDKHPVD
ISDVFIHTMGTTISGDNIGKNFTFSMRINDTSNEVTGRVLISRDELRKVPSPSQVISIAF
PTIGAILEASLLENVTVNGLVLSAILPKELKRISLIFEKISKSEERRTQCVGWHSVENRW
DQQACKMIQENSQQAVCKCRPSKLFTSFSILMSPHILESLILTYITYVGLGISICSLILC
LSIEVLVWSQVTKTEITYLRHVCIVNIAATLLMADVWFIVASFLSGPITHHKGCVAATFF
VHFFYLSVFFWMLAKALLILYGIMIVFHTLPKSVLVASLFSVGYGCPLAIAAITVAATEP
GKGYLRPEICWLNWDMTKALLAFVIPALAIVVVNLITVTLVIVKTQRAAIGNSMFQEVRA
IVRISKNIAILTPLLGLTWGFGVATVIDDRSLAFHIIFSLLNAFQGFFILVFGTILDPKV
EGHSSKDSLKCSGIENICLQQASLIMLLLNYLVIPSKAQVNKPGYIPNLGECSHYRSKIH
LKAGDKLQSPEGKPKTGRIQEKCEGPCISSSNCSQPCAKDFHGEIGFTCNQKKWQKSAET
CTSLSVEKLFKDSTGASRLSVAAPSIPLHILDFRAPETIESVAQGIRKNCPFDYACITDM
VKSSETTSGNIAFIVELLKNISTDLSDNVTREKMKSYSEVANHILDTAAISNWAFIPNKN
ASSDLLQSVNLFARQLHIHNNSENIVNELFIQTKGFHINHNTSEKSLNFSMSMNNTTEDI
LGMVQIPRQELRKLWPNASQAISIAFPTLGAILREAHLQNVSLPRQVNGLVLSVVLPERL
QEIILTFEKINKTRNARAQCVGWHSKKRRWDEKACQMMLDIRNEVKCRCNYTSVVMSFSI
LMSSKSMTDKVLDYITCIGLSVSILSLVLCLIIEATVWSRVVVTEISYMRHVCIVNIAVS
LLTANVWFIIGSHFNIKAQDYNMCVAVTFFSHFFYLSLFFWMLFKALLIIYGILVIFRRM
MKSRMMVIGFAIGYGCPLIIAVTTVAITEPEKGYMRPEACWLNWDNTKALLAFAIPAFVI
VAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGT
SLTFHIIFALLNAFQIRDALRMRMSSLKGKSRAAEFNSRYNCLSDVIKLIHILPYVCVFE
VVFKEILLYPQPVKMFPQIETEREQEEELEMVNSIGADECGCRHWKKTPKDLRDTWADDC
KSTLLPRAFAYKHPSWFENRMALNHTALPQDERLPHYLRDGDPFASKLSWEADLVAGFYL
TIIGILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISAHSRCVLTQSLDGLGYL
GRLYSVWTCINIMNAYGECTRTLRRARHAWFCENKQDEPQGICKPFTIISCFCHRWVFGW
IGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICYLSYGVWLKRKHAYICLAAIWAYASFW
TTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKII
AKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSI
PIQLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKS
SAVLEIHEEDKGRLWHQLSCGENSEMTASSETLGTKAHSPLQETREGENEAVG

>gi568815592f:47607246_47818439|GENSCAN_predicted_CDS_5|5559_bp
atggcaggtgtatgcgatggtgtctgtacagactactcccagtgtactcaaccttgccct
ccagacactcagggaaatatggggttttcatgcaggcaaaagacatggcacaagatcact
gacacctgccagactcttaatgccctcaacatctttgaggaggattcacgtttggttcag
ccatttgaagacaatataaaaataagtgtatatactggaaagtctgagaccataacagat
atgttgctacaaaagtgtcccacagatctgtcttgtgtaattagaaacattcagcagtct
ccctggataccaggaaacattgccgtaattgtgcagctcttacacaacatatcaacagca
atatggacaggtgttgatgaggcaaagatgcagagttacagcaccatagccaaccacatt
cttaacagcaaaagcatctccaactggactttcattcctgacagaaacagcagctatatc
ctgctacattcagtcaactcctttgcaagaaggctattcatagataaacatcctgttgac
atatcagatgtcttcattcatactatgggcaccaccatatctggagataacattggaaaa
aatttcactttttctatgagaattaatgataccagcaatgaagtcactgggagagtgttg
atcagcagagatgaacttcggaaggtgccttccccttctcaggtcatcagcattgcattt
ccaactattggggctattttggaagccagtcttttggaaaatgttactgtaaatgggctt
gtcctgtctgccattttgcccaaggaacttaaaagaatctcactgatttttgaaaagatc
agcaagtcagaggagaggaggacacagtgtgttggctggcactctgtggagaacagatgg
gaccagcaggcctgcaaaatgattcaagaaaactcccagcaagctgtttgcaaatgtagg
ccaagcaaattgtttacctctttctcaattcttatgtcacctcacatcttagagagtctg
attctgacttacatcacatatgtaggcctgggcatttctatttgcagcctgatcctttgc
ttgtccattgaggtcctagtctggagccaagtgacaaagacagagatcacctatttacgc
catgtgtgcattgttaacattgcagccactttgctgatggcagatgtgtggttcattgtg
gcttcctttcttagtggcccaataacacaccacaagggatgtgtggcagccacatttttt
gttcatttcttttacctttctgtatttttctggatgcttgccaaggcactccttatcctc
tatggaatcatgattgttttccataccttgcccaagtcagtcctggtggcatctctgttt
tcagtgggctatggatgccctttggccattgctgccatcactgttgctgccactgaacct
ggcaaaggctatctacgacctgagatctgctggctcaactgggacatgaccaaagccctc
ctggccttcgtgatcccagctttggccatcgtggtagtaaacctgatcacagtcacactg
gtgattgtcaagacccagcgagctgccattggcaattccatgttccaggaagtgagagcc
attgtgagaatcagcaagaacatcgccatcctcacaccacttctgggactgacctgggga
tttggagtagccactgtcatcgatgacagatccctggccttccacattatcttctccctg
ctcaatgcattccagggtttcttcatcctagtgtttggaaccatcctggatccaaaggtt
gagggtcattcatctaaagactccctgaagtgttctggcattgaaaatatttgtctccaa
caagcatccctgataatgcttcttctgaattatcttgtcatcccatcaaaggcccaagtt
aacaaaccaggctacatccctaacctaggagaatgttcccactatagatccaagattcac
ctaaaagctggagataaacttcaaagccctgaagggaaacccaagactggaaggatccaa
gagaaatgcgaaggaccttgtatttcttcttccaactgcagccagccctgtgctaaggac
tttcatggagaaataggatttacatgtaatcaaaaaaagtggcaaaaatcagctgaaaca
tgtacaagcctttctgtggaaaaactctttaaggactcaactggtgcatctcgcctttct
gtagcagcaccatctatacctctgcatattctagactttcgagctccagagaccattgag
agtgtagctcaaggaatccgtaagaactgcccctttgattatgcctgcatcactgacatg
gtgaaatcatcagaaacaacatctggaaatattgcatttatagtggagttattaaaaaat
atttctacagacttgtctgataatgttactcgagagaaaatgaagagctatagtgaagtg
gccaaccacatcctcgacacagcagccatttcaaactgggctttcattcccaacaaaaat
gccagctcggatttgttgcagtcagtgaatttgtttgccagacaactccacatccacaat
aattctgagaacattgtgaatgaactcttcattcagacaaaagggtttcacatcaaccat
aatacctcagagaaaagcctcaatttctccatgagcatgaacaataccacagaagatatc
ttaggaatggtacagattcccaggcaagagctaaggaagctgtggccaaatgcatcccaa
gccattagcatagctttcccaaccttgggggctatcctgagagaagcccacttgcaaaat
gtgagtcttcccagacaggtaaatggtctggtgctatcagtggttttaccagaaaggttg
caagaaatcatactcaccttcgaaaagatcaataaaacccgcaatgccagagcccagtgt
gttggctggcactccaagaaaaggagatgggatgagaaagcgtgccaaatgatgttggat
atcaggaacgaagtgaaatgccgctgtaactacaccagtgtggtgatgtctttttccatt
ctcatgtcctccaaatcgatgaccgacaaagttctggactacatcacctgcattgggctc
agcgtctcaatcctaagcttggttctttgcctgatcattgaagccacagtgtggtcccgg
gtggttgtgacggagatatcatacatgcgtcacgtgtgcatcgtgaatatagcagtgtcc
cttctgactgccaatgtgtggtttatcataggctctcactttaacattaaggcccaggac
tacaacatgtgtgttgcagtgacatttttcagccactttttctacctctctctgtttttc
tggatgctcttcaaagcattgctcatcatttatggaatattggtcattttccgtaggatg
atgaagtcccgaatgatggtcattggctttgccattggctatgggtgcccattgatcatt
gctgtcactacagttgctatcacagagccagagaaaggctacatgagacctgaggcctgt
tggcttaactgggacaataccaaagcccttttagcatttgccatcccggcgttcgtcatt
gtggctgtaaatctgattgtggttttggttgttgctgtcaacactcagaggccctctatt
ggcagttccaagtctcaggatgtggtcataattatgaggatcagcaaaaatgttgccatc
ctcactccactgctgggactgacctggggttttggaatagccactctcatagaaggcact
tccttgacgttccatataatttttgccttgctcaatgctttccagataagagatgctttg
aggatgaggatgtcttcactgaaggggaaatcgagggcagctgagtttaattctcgatac
aactgcctaagtgatgtcatcaaattgatccacattttgccttatgtttgtgtttttgaa
gttgtgtttaaagaaattcttctgtacccgcagcctgtaaagatgtttccccagattgag
actgaaagagagcaggaagaggagttggaaatggtcaacagtattggagcagatgagtgt
gggtgcagacactggaaaaagacaccaaaggacctgagggacacctgggcagatgattgt
aagtcaacgctacttccccgggccttcgcatataaacatccctcgtggttcgagaacaga
atggcgttaaatcacactgccctgcctcaggacgagcgcctgccccattaccttcgagat
ggggatccttttgcttccaaactttcttgggaagcggatttagtggctggcttttaccta
acaataattgggattctgtccacatttggaaatggatatgtcctttacatgtcttctaga
cgaaagaagaagctgagacccgctgaaataatgactatcaatttagcagtctgtgatctg
gggatttcagcacacagcagatgtgtgcttactcagagtttggatggtcttggttatctg
ggaaggctttattcagtatggacctgcataaacattatgaacgcttatggtgaatgcaca
cgcacattaagaagagcaagacatgcctggttttgtgaaaataaacaggacgaaccccag
gggatttgcaagccgttcaccatcatctcttgcttttgtcaccgctgggtgtttggctgg
atcggctgccgctggtatggatgggctggatttttctttggctgtggaagccttatcacc
atgactgctgtcagcctggatcgatatttgaaaatctgctatttatcttatggggtttgg
ctgaaaagaaagcacgcctacatctgcctggcagccatctgggcctatgcttccttctgg
accaccatgcccttggtaggtctgggggactacgtacctgagcccttcggaacctcgtgc
accctggactggtggctggcccaggcctcggtagggggccaggttttcatcctgaacatc
ctcttcttctgcctcttgctcccaacggctgtgatcgtgttctcctacgtaaagatcatt
gccaaggttaagtcctcttccaaagaagtagctcatttcgacagtcggatccatagcagc
catgtgctggaaatgaaactgacaaaggtagcgatgttgatttgtgctggattcctgatt
gcctggattccttatgcagtggtgtctgtgtggtcagcttttggaaggccagactccatt
cccatacagctctctgtggtgccaaccctacttgcaaaatctgcagcgatgtacaatccc
atcatttaccaagttattgattacaaatttgcctgttgccaaactggtggtttgaaagca
accaagaagaagtctctggaaggcttcaggctgcacaccgtaaccacagtcaggaagtct
tctgctgtgctggaaattcatgaagaggacaaagggagattatggcatcagctatcttgt
ggggagaattctgagatgacagcctccagtgaaacactagggacaaaggcccattcacct
cttcaagaaaccagggaaggggaaaatgaagctgttggn