GENSCAN 1.0	Date run:  8-Nov-116	Time: 02:37:59

Sequence gi568815592r:46900225_47129061 : 228837 bp : 40.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -   1863   1858    6                               1.05
 1.06 Term -   2684   2437  248  0  2   75   43   160 0.706   5.17
 1.05 Intr -   3149   2987  163  2  1   50   33    95 0.338  -1.17
 1.04 Intr -   6562   6437  126  1  0   82   97    56 0.076   5.86
 1.03 Intr -   9248   9163   86  0  2   89   97   -17 0.101  -2.08
 1.02 Intr -  13599  13496  104  2  2   35   69   126 0.278   4.30
 1.01 Init -  16305  16259   47  0  2   62   92    44 0.233   2.41
 1.00 Prom -  21170  21131   40                              -4.95

 2.00 Prom +  28796  28835   40                              -3.65
 2.01 Init +  28973  29052   80  1  2   83   66    39 0.435   1.78
 2.02 Term +  33381  33723  343  0  1   49   49   189 0.202   4.10
 2.03 PlyA +  34334  34339    6                               1.05

 3.06 PlyA -  34615  34610    6                               1.05
 3.05 Term -  44280  44103  178  2  1   36   49   143 0.163   1.38
 3.04 Intr -  47728  47563  166  2  1   60   77   147 0.538   8.90
 3.03 Intr -  54899  54749  151  2  1  106   15    56 0.318  -1.09
 3.02 Intr -  55608  55464  145  2  1   98   97    96 0.729  10.86
 3.01 Init -  62673  62495  179  0  2   52   80   101 0.486   4.48
 3.00 Prom -  78130  78091   40                              -2.75

 4.03 PlyA -  78304  78299    6                               1.05
 4.02 Term -  85001  84808  194  0  2  106   55    86 0.757   3.70
 4.01 Init -  87571  87529   43  1  1   86   96    13 0.662   2.53
 4.00 Prom -  92547  92508   40                              -3.45

 5.17 PlyA -  92711  92706    6                               1.05
 5.16 Term - 100071  99998   74  1  2  133   48    81 0.952   5.69
 5.15 Intr - 101343 101277   67  0  1   61  113     8 0.136  -1.84
 5.14 Intr - 105652 105593   60  1  0   94   86    26 0.135   1.01
 5.13 Intr - 110094 108721 1374  0  0  109   94   582 0.488  48.99
 5.12 Intr - 111971 111783  189  2  0   60   64   143 0.978   7.96
 5.11 Intr - 114620 114457  164  0  2   99  100   109 0.995  11.97
 5.10 Intr - 116544 116393  152  2  2   68   90   149 0.999  11.99
 5.09 Intr - 120565 120507   59  1  2   61  123    35 0.962   1.06
 5.08 Intr - 121834 121734  101  2  2   78   82    64 0.967   3.71
 5.07 Intr - 123993 123820  174  1  0   52   82    73 0.690   2.09
 5.06 Intr - 125779 125630  150  2  0  106  110    34 0.778   6.61
 5.05 Intr - 127994 127929   66  0  0   54  106    39 0.011   0.26
 5.04 Intr - 132615 132534   82  0  1   71   91    44 0.036   1.29
 5.03 Intr - 135673 135611   63  1  0  135   93    28 0.206   6.00
 5.02 Intr - 186033 185954   80  1  2   98   46    57 0.193   0.85
 5.01 Init - 186336 186264   73  0  1   42  116    84 0.914   8.16
 5.00 Prom - 188225 188186   40                              -7.05

 6.00 Prom + 189301 189340   40                              -3.15
 6.01 Init + 196004 196137  134  1  2   59  107    73 0.726   5.42
 6.02 Intr + 202405 202462   58  1  1  128   98     1 0.875   3.07
 6.03 Term + 205264 205551  288  0  0   71   41   249 0.861  12.89
 6.04 PlyA + 208169 208174    6                               1.05

 7.02 PlyA - 209577 209572    6                               1.05
 7.01 Term - 222838 222668  171  1  0   16   32   224 0.479   6.44

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:46900225_47129061|GENSCAN_predicted_peptide_1|257_aa
MTISKPMRGSEHISSRESYAYNITYCVDVKAKQLTCGKNLHLLLQFTNKFHRKIESEETR
KLLRAARLILRARAYFPALANQLKLEDMKSPRRTTLCLMFIVIYSSKAALNWNYESTIHP
LEIPSGQLCPLWLRQSPGDLYTDGAGRGGPIGSSVFLSEVNTLPSTGSPGKPVLPCPVTW
QPDLCNSLNLGMAKSIYPSPSQLLRGFIAINVLFPPLSPMIVGLKIVSRLLPLDNEEAVG
DRAVEAALAKMWPESSR

>gi568815592r:46900225_47129061|GENSCAN_predicted_CDS_1|774_bp
atgacaatatccaaaccgatgaggggctctgagcacatcagcagcagagaaagctatgcg
tataacatcacctactgcgtggacgtgaaagctaagcagcttacatgtgggaagaacctt
caccttctacttcaatttacaaacaaatttcacaggaaaatagagtcagaggagaccagg
aagttgctcagagccgcaaggctaatactgagggctagggcatatttcccagctttggcc
aaccaactcaaacttgaagacatgaaatccccaaggagaaccactttgtgcctcatgttt
attgtgatttattcttccaaagctgcactgaactggaattacgagtctactattcatcct
ttggaaattccctctggacagctctgtccactgtggctcagacagtcccctggggacctc
tacacagatggagcaggcaggggaggtccaattggaagctctgttttcttgtctgaagta
aatacactgccgagcactgggagccctggcaaacctgtgctcccttgtccggtgacttgg
cagccagatctttgtaactccttgaatctggggatggccaagagcatttacccatctcca
tcccaactcctcagaggcttcattgccatcaatgtgcttttccctccattatctccaatg
attgtagggcttaaaatagtaagtaggctgctcccactggacaacgaagaggctgtaggt
gacagagctgtggaagcggcacttgcaaagatgtggcctgaaagttccagatga

>gi568815592r:46900225_47129061|GENSCAN_predicted_peptide_2|140_aa
MDEAGNGHSQQTIARTKNQTPHVLTHRNLKGKRLKTKVFTVAATAIQNGLALYRLSSGLR
EIAQPSTAPMAYLSTMRGSTFPSSRPFITTSPSIYQSLPLRTTKLFLDLKHSIQNIATYQ
QLHDYSRPIALGFASSDLEY

>gi568815592r:46900225_47129061|GENSCAN_predicted_CDS_2|423_bp
atggatgaagctggaaacggtcattctcagcaaactatcgcaaggacaaaaaaccaaaca
cctcatgttctcactcataggaatttaaagggtaagagattgaagacaaaggtgttcaca
gtggctgctactgcaattcaaaatggtctagcattgtacagattgtcgtcgggcctcagg
gaaattgctcagccctccacagctcccatggcctatctcagcacaatgagggggtccaca
tttccaagttcaagacctttcataactacgtcaccttctatttatcagagtcttcctctc
aggaccactaaactatttttggatctgaagcacagtatacaaaacatagctacatatcaa
caattacacgattattccagacccatcgcccttggttttgcctcatctgacctggaatat
taa

>gi568815592r:46900225_47129061|GENSCAN_predicted_peptide_3|272_aa
MWGWENKGESKAGYHTLDLNLLTRRMVGTENRRTGIKYFGKCCYLKRNEEEYPDEEGEDS
SFQVCCCWRTDCHPAEHNGGSPGLSTTQLVKIHMAQSSHVLSTARTGLWPEDKFPVSSRE
PGERHQAPNIGNHVERISYLLQSPYYFPPPSPRPPPPVTPSPPLPNQRPKEQGGPARTNT
SLSRDWVVGLCWQVDVQVPPPRSADSGKCAVALWKMGVGAGQGAMLQNLHFSTSTLEQES
PPCGPWTSASQCPVRNQVTQQDMSHGRASVIA

>gi568815592r:46900225_47129061|GENSCAN_predicted_CDS_3|819_bp
atgtggggctgggaaaataaaggagaaagtaaagctggttatcacactttagatttgaac
ctgctaactagaagaatggtgggtactgaaaacaggagaacaggtatcaagtactttggg
aaatgctgttatttaaagaggaatgaagaagaatatccagatgaggagggagaagacagc
agcttccaagtgtgctgctgttggaggactgactgtcaccctgctgaacacaatggaggt
agtccaggtctctcaacaactcagcttgtgaaaatccacatggcccagagttcccacgtt
ctttctacagccaggactggcttgtggccagaggacaagtttcctgtttcctctagggag
cctggagagaggcatcaggcaccaaatataggaaatcatgtggagaggatctcttattta
ttacagtccccatattacttccctcccccaagcccccgccccccacctccagtcacccca
tcaccacccctgcccaatcaaaggcccaaggagcaagggggacctgcacgtacaaacacc
agcctgagcagggactgggttgttggcctctgctggcaggtggatgtccaggtcccccct
ccaaggtccgcagattcaggaaaatgtgctgtagccctttggaagatgggggtaggagca
ggacagggagcaatgctgcaaaatctgcatttttcaaccagcaccttagaacaagagtcc
ccaccttgtgggccatggactagtgccagtcagtgtcctgttaggaaccaggtgacacag
caggacatgagccatgggagagccagtgttattgcctga

>gi568815592r:46900225_47129061|GENSCAN_predicted_peptide_4|78_aa
MATRDWEGGRQMKKGGRRNSLESSLPKDGSLVSQEVIHPWHARPSRDCGNEAGEARTGAS
DPSKECTACENIGHGVHG

>gi568815592r:46900225_47129061|GENSCAN_predicted_CDS_4|237_bp
atggctaccagagattgggaagggggaagacagatgaagaaaggtgggagaaggaatagc
ctggaatcctcgcttcctaaggatgggtccttggtctctcaggaagttattcatccttgg
catgctcgtccatccagagattgtggaaatgaggctggggaagcaaggactggagcttct
gatccctcaaaagaatgcacagcctgcgaaaatattggccatggagttcatggctga

>gi568815592r:46900225_47129061|GENSCAN_predicted_peptide_5|975_aa
MCKKLLALSFEARFLQLVVPGLREDYSHTPLRYGFQVSMGYFKINSCGGMKESPVLIVSI
FTFMCTQCLAATSDGHQLTQVHSEKSNSDTIQQVTIKTDEMHALLLCFSVLNGASGLSLL
QSPVEEYQLLLQVTYRDSKEKRDLRNFLKLLKPPLLWSHGLIRIIRAKATTDCNSLNGVL
QCTCEDSYTWFPPSCLDPQNCYLHTAGALPSCECHLNNLSQSVNFCERTKIWGTFKINER
FTNDLLNSSSAIYSKYANGIEIQLKKAYERIQGFESVQVTQFRNGSIVAGYEVVGSSSAS
ELLSAIEHVAEKAKTALHKLFPLEDGSFRVFGKAQCNDIVFGFGSKDDEYTLPCSSGYRG
NITAKCESSGWQVIRETCVLSLLEELNKNFSMIVGNATEAAVSSFVQNLSVIIRQNPSTT
VGNLASVVSILSNISSLSLASHFRVSNSTMEDVISIADNILNSASVTNWTVLLREEKYAS
SRLLETLENISTLVPPTALPLNFSRKFIDWKGIPVNKSQLKRGYSYQIKMCPQNTSIPIR
GRVLIGSDQFQRSLPETIISMASLTLGNILPVSKNGNAQVNGPVISTVIQNYSINEVFLF
FSKIESNLSQPHCVFWDFSHLQWNDAGCHLVNETQDIVTCQCTHLTSFSILMSPFVPSTI
FPVVKWITYVGLGISIGSLILCLIIEALFWKQIKKSQTSHTRRICMVNIALSLLIADVWF
IVGATVDTTVNPSGVCTAAVFFTHFFYLSLFFWMLMLGILLAYRIILVFHHMAQHLMMAV
GFCLGYGCPLIISVITIAVTQPSNTYKRKDVCWLNWSNGSKPLLAFVVPALAIVAVNFVV
VLLVLTKLWRPTVGERLSRDDKATIIRVGKSLLILTPLLGLTWGFGIGTIVDSQNLAWHV
IFALLNAFQLRQLLFNKLSALSSWKQTEKQNSSDLSAKPKFSKPFNPLQNKGHYAFSHTG
DSSDNIMLTQFVSNE

>gi568815592r:46900225_47129061|GENSCAN_predicted_CDS_5|2928_bp
atgtgtaagaaactcctggctctctcctttgaagcccgcttcctgcagctggttgtccct
ggacttagagaagattattcacatactcccttgagatacggtttccaagtcagcatgggc
tatttcaaaatcaacagctgtggaggcatgaaggagtccccagtgttgattgtttccatc
tttacgttcatgtgtacccagtgcttagctgccactagtgatggccatcagttaacccaa
gtgcactcagagaagtcaaattctgacacaatccagcaagtaactataaaaactgatgaa
atgcacgcattgcttctgtgcttctctgttctcaatggggcttcaggattgagcctgcta
caaagcccagtcgaagaatatcagctgctgcttcaggtgacctatagagattccaaggag
aaaagagatttgagaaattttctgaagctcttgaagcctccattattatggtcacatggg
ctaattagaattatcagagcaaaggctaccacagactgcaacagcctgaatggagtcctg
cagtgtacctgtgaagacagctacacctggtttcctccctcatgccttgatccccagaac
tgctaccttcacacggctggagcactcccaagctgtgaatgtcatctcaacaacctcagc
cagagtgtcaatttctgtgagagaacaaagatttggggcactttcaaaattaatgaaagg
tttacaaatgaccttttgaattcatcttctgctatatactccaaatatgcaaatggaatt
gaaattcaacttaaaaaagcatatgaaagaattcaaggttttgagtcggttcaggtcacc
caatttcgaaatggaagcatcgttgctgggtatgaagttgttggctccagcagtgcatct
gaactgctgtcagccattgaacatgttgccgagaaggctaagacagcccttcacaagctg
tttccattagaagacggctctttcagagtgttcggaaaagcccagtgtaatgacattgtc
tttggatttgggtccaaggatgatgaatataccctgccctgcagcagtggctacagggga
aacatcacagccaagtgtgagtcctctgggtggcaggtcatcagggagacttgtgtgctc
tctctgcttgaagaactgaacaagaatttcagtatgattgtaggcaatgccactgaggca
gctgtgtcatccttcgtgcaaaatctttctgtcatcattcggcaaaacccatcaaccaca
gtggggaatctggcttcggtggtgtcgattctgagcaatatttcatctctgtcactggcc
agccatttcagggtgtccaattcaacaatggaggatgtcatcagtatagctgacaatatc
cttaattcagcctcagtaaccaactggacagtcttactgcgggaagaaaagtatgccagc
tcacggttactagagacattagaaaacatcagcactctggtgcctccgacagctcttcct
ctgaatttttctcggaaattcattgactggaaagggattccagtgaacaaaagccaactc
aaaaggggttacagctatcagattaaaatgtgtccccaaaatacatctattcccatcaga
ggccgtgtgttaattgggtcagaccaattccagagatcccttccagaaactattatcagc
atggcctcgttgactctggggaacattctacccgtttccaaaaatggaaatgctcaggtc
aatggacctgtgatatccacggttattcaaaactattccataaatgaagttttcctattt
ttttccaagatagagtcaaacctgagccagcctcattgtgtgttttgggatttcagtcat
ttgcagtggaacgatgcaggctgccacctagtgaatgaaactcaagacatcgtgacgtgc
caatgtactcacttgacctccttctccatattgatgtcaccttttgtcccctctacaatc
ttccccgttgtaaaatggatcacctatgtgggactgggtatctccattggaagtctcatt
ttatgcctgatcatcgaggctttgttttggaagcagattaaaaaaagccaaacctctcac
acacgtcgtatttgcatggtgaacatagccctgtccctcttgattgctgatgtctggttt
attgttggtgccacagtggacaccacggtgaacccttctggagtctgcacagctgctgtg
ttctttacacacttcttctacctctctttgttcttctggatgctcatgcttggcatcctg
ctggcttaccggatcatcctcgtgttccatcacatggcccagcatttgatgatggctgtt
ggattttgcctgggttatgggtgccctctcattatatctgtcattaccattgctgtcacg
caacctagcaatacctacaaaaggaaagatgtgtgttggcttaactggtccaatggaagc
aaaccactcctggcttttgttgtccctgcactggctattgtggctgtgaacttcgttgtg
gtgctgctagttctcacaaagctctggaggccgactgttggggaaagactgagtcgggat
gacaaggccaccatcatccgcgtggggaagagcctcctcattctgacccctctgctaggg
ctcacctggggctttggaataggaacaatagtggacagccagaatctggcttggcatgtt
atttttgctttactcaatgcattccagctgcgacaacttctgttcaacaagttgtctgcc
ttaagttcttggaagcaaacagaaaagcaaaactcatcagatttatctgccaaacccaaa
ttctcaaagcctttcaacccactgcaaaacaaaggccattatgcattttctcatactgga
gattcctccgacaacatcatgctaactcagtttgtctcaaatgaataa

>gi568815592r:46900225_47129061|GENSCAN_predicted_peptide_6|159_aa
MYISSLAFLACYVHGHKGFLSPQKARKQMDTDADSCKLNQQAQKRFSVTSIGSHGLQLSR
LLLKAQQNVEMYLGGELNAHAFDGNSDSPSSHTNTPASPGVLAPNTFTQSPLRQPMPRVV
TAIPNGSREEAKTPGIFGLRNYPPCTDRTGKDSPLKAAF

>gi568815592r:46900225_47129061|GENSCAN_predicted_CDS_6|480_bp
atgtacattagctccctggcatttctggcttgctatgtgcatggccacaaagggtttctc
tctccacaaaaagccagaaaacaaatggacacagacgctgacagttgcaaactaaaccaa
caagctcagaaacgcttttctgttacctccattggtagtcacggcttgcaattgtcaagg
ttactcctaaaggcccagcaaaatgttgaaatgtatcttgggggggaactaaatgcccat
gcttttgatggcaattcagactccccatcctcccacaccaacacccctgccagccctggt
gtactggctccaaacactttcacacagtcccctttgagacagcccatgcctcgagttgtc
acagccatccccaacggctcaagagaagaagccaagacaccaggtatctttggtctccgt
aattacccgccgtgcactgacaggacaggaaaggattcgccattaaaagccgcgttttaa

>gi568815592r:46900225_47129061|GENSCAN_predicted_peptide_7|56_aa
ELLTNLTGQWWLKKFSKGDKSLEDEDHSGRPLKVDNNQLRATIEADPLTTAGEVAK

>gi568815592r:46900225_47129061|GENSCAN_predicted_CDS_7|171_bp
gaactgttaaccaacttaacaggacagtggtggctcaagaagtttagcaaaggagacaag
agccttgaagatgaggatcatagtggccggccattgaaagttgacaacaaccagttgaga
gcaaccatcgaagctgatcctcttacaactgcaggagaagttgccaaataa