GENSCAN 1.0	Date run:  8-Nov-116	Time: 03:06:27

Sequence gi568815592f:43670708_43882087 : 211380 bp : 50.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +     82    242  161  2  2  104   39   293 0.999  24.10
 1.02 PlyA +   1872   1877    6                               1.05

 2.07 PlyA -   2020   2015    6                               1.05
 2.06 Term -   4312   4284   29  2  2  122   44    12 0.273  -1.56
 2.05 Intr -   4545   4495   51  1  0   57  119    40 0.715   2.88
 2.04 Intr -   4910   4787  124  2  1   94   75   156 0.998  15.06
 2.03 Intr -   7918   7811  108  1  0  112   86   108 0.990  13.48
 2.02 Intr -  10413  10382   32  1  2  121   92    26 0.990   4.15
 2.01 Init -  17072  16961  112  2  1   80  113    80 0.972   8.34
 2.00 Prom -  25399  25360   40                              -1.86

 3.10 PlyA -  27812  27807    6                               1.05
 3.09 Term -  31817  31641  177  2  0   89   54     3 0.127  -5.31
 3.08 Intr -  35425  35334   92  2  2   41   98   115 0.494   7.51
 3.07 Intr -  39826  39757   70  1  1  134   80    -9 0.028   1.65
 3.06 Intr -  46773  46716   58  2  1   55   89    71 0.141   2.79
 3.05 Intr -  46904  46800  105  1  0  -11  105   129 0.042   4.03
 3.04 Intr -  67103  67029   75  1  0   73   99    32 0.313   1.43
 3.03 Intr -  68433  68356   78  2  0   75   92    33 0.300   1.07
 3.02 Intr -  74413  74282  132  0  0  142   75    48 0.774   8.66
 3.01 Init -  91480  91377  104  1  2   78   27   121 0.038   4.71
 3.00 Prom -  92997  92958   40                              -7.66

 4.00 Prom +  97857  97896   40                              -8.56
 4.01 Init + 100540 100605   66  0  0   88  121    71 0.921   9.48
 4.02 Intr + 103634 103685   52  1  1  115  113   -12 0.903   2.48
 4.03 Intr + 106762 106958  197  2  2   66   80   338 0.983  29.93
 4.04 Intr + 107753 107829   77  1  2  147   94    33 0.980   8.11
 4.05 Intr + 108182 108211   30  2  0  114  106     2 0.762   1.85
 4.06 Intr + 110025 110104   80  0  2  124  -23   105 0.166   2.19
 4.07 Term + 113834 114003  170  0  2  124   44    60 0.482   3.24
 4.08 PlyA + 114243 114248    6                               1.05

 5.17 PlyA - 114289 114284    6                              -0.45
 5.16 Term - 114611 114583   29  0  2   31   39    36 0.080  -8.76
 5.15 Intr - 114875 114746  130  2  1   15   94   153 0.238   8.87
 5.14 Intr - 116013 115922   92  1  2   87   98     6 0.124   1.21
 5.13 Intr - 133753 133472  282  2  0   71   92    63 0.188   2.39
 5.12 Intr - 135323 135163  161  1  2   59   42    89 0.285   1.03
 5.11 Intr - 138915 138825   91  1  1   70   68   117 0.783   6.95
 5.10 Intr - 140528 140507   22  2  1   77  113    18 0.584   0.32
 5.09 Intr - 140923 140758  166  0  1   19   98    74 0.158   1.46
 5.08 Intr - 147189 147078  112  1  1   44   91   101 0.359   5.44
 5.07 Intr - 154006 153887  120  2  0   51   51    77 0.013   0.77
 5.06 Intr - 183884 183829   56  1  2   80   91    81 0.876   6.22
 5.05 Intr - 185516 185394  123  1  0  112   97     6 0.848   3.60
 5.04 Intr - 200597 200547   51  1  0   98   87    14 0.090   0.32
 5.03 Intr - 203099 203063   37  0  1  111   84    20 0.397   1.22
 5.02 Intr - 205599 205293  307  0  1   99   80    85 0.383   4.82
 5.01 Intr - 207302 207174  129  2  0   82   49    53 0.524   1.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:43670708_43882087|GENSCAN_predicted_peptide_1|53_aa
XSWSIQMERGNALVVLRSLLWPGLTFYHAPRTKNYGYVYVGTGEKNMDLPFML

>gi568815592f:43670708_43882087|GENSCAN_predicted_CDS_1|162_bp
nggtcctggagcatccagatggagaggggcaatgccctggtggtgctgcgcagcctgctc
tggccgggcctcaccttctaccatgctccccgcaccaagaactatggctacgtctacgtg
ggcactggcgagaagaacatggacttgcccttcatgctatag

>gi568815592f:43670708_43882087|GENSCAN_predicted_peptide_2|151_aa
MAALKALVSGCGRLLRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKES
PNPPNPSGQCPICRWNLKHKYNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVK
MAHRAGLGFLKELFRRANPNSTGPLAKAQGG

>gi568815592f:43670708_43882087|GENSCAN_predicted_CDS_2|456_bp
atggcggccctcaaggctctggtgtccggctgtgggcggcttctccgtgggctactagcg
ggcccggcagcgaccagctggtctcggcttccagctcgcgggttcagggaagtggtggag
acccaagaagggaagacaactataattgaaggccgtatcacagcgactcccaaggagagt
ccaaatcctcctaacccctctggccagtgccccatctgccgttggaacctgaagcacaag
tataactatgacgatgttctgctgcttagccagttcatccggcctcatggaggcatgctg
ccccgaaagatcacaggcctatgccaggaagaacaccgcaagatcgaggagtgtgtgaag
atggcccaccgagcaggcctcggcttcctgaaggagttgttccgaagagcaaaccccaac
tcaaccgggcccttagcaaaggcgcaaggagggtag

>gi568815592f:43670708_43882087|GENSCAN_predicted_peptide_3|296_aa
MAKTFNTCYGSGTVHIELTAYAKPDINLNFWMVERSHCPLAKPSPHTVPSSSPQRSGLLR
VWGIPLHVTDIHSYGNVKRHVLSGPPALACTASSEKVQPITKARRLAGQRENFGQDLGLE
FPSKWAVSISEGDDGEGDGGGDGGGNDGDSDGGGGSDVIVIVGMRVQDHEETVGHVTEAY
RNIVKTYWTPAPFTAQQGGGYKVPIWPADLTGEEEHLATGILITVMEEEAGSGVLTKQPS
GSQPWLHIEPFKEPLKNAAAWAPALREFNSTVLFNSGERPGHHLLIPWLMLMSSQE

>gi568815592f:43670708_43882087|GENSCAN_predicted_CDS_3|891_bp
atggccaaaacatttaacacctgctatggctcaggcacagttcacatagagctgacggcg
tatgccaagccagacataaacctcaatttctggatggtggagaggtcccattgcccccta
gccaagccctctcctcatactgtccccagctcatccccacaaaggagcggccttcttcgt
gtttggggcattcctttgcatgtcactgatattcacagctatggcaatgtcaaaagacat
gttctgtctggcccacccgcattggcctgcacagcgtcctcagaaaaggtgcagcccatc
accaaagccagaaggctggctggccagagagagaatttcggacaggatttaggcctggaa
tttccctccaaatgggcggtgtcgatcagtgaaggggatgatggtgaaggtgatggcggt
ggtgatggaggtggcaatgatggagacagcgatggtggtggagggagtgatgtgattgtc
atagtgggaatgagggtacaggaccatgaagaaaccgttggccatgtcactgaggcctac
aggaacatcgtgaaaacttactggacacccgctccattcacagcccagcaaggtggaggt
tataaggtaccaatatggccggctgacctgactggagaggaggaacatctggcaactgga
atcttaataacagtaatggaagaggaagcaggctctggtgtcctcaccaagcagcccagt
ggttctcaaccctggctgcacatagaaccatttaaggagcctttaaaaaacgctgctgcc
tgggctccagccctgagagagttcaattcaactgttctgtttaactccggggagaggcca
ggccatcatcttttaattccctggttgatgctgatgagcagccaggaatga

>gi568815592f:43670708_43882087|GENSCAN_predicted_peptide_4|223_aa
MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVYVDVTSRGGEPGRRK
EPPSGFREPDLSPGKTDTERSIQKPRCRHHTITIDRTVLNPET

>gi568815592f:43670708_43882087|GENSCAN_predicted_CDS_4|672_bp
atgaactttctgctgtcttgggtgcattggagccttgccttgctgctctacctccaccat
gccaagtggtcccaggctgcacccatggcagaaggaggagggcagaatcatcacgaagtg
gtgaagttcatggatgtctatcagcgcagctactgccatccaatcgagaccctggtggac
atcttccaggagtaccctgatgagatcgagtacatcttcaagccatcctgtgtgcccctg
atgcgatgcgggggctgctgcaatgacgagggcctggagtgtgtgcccactgaggagtcc
aacatcaccatgcagattatgcggatcaaacctcaccaaggccagcacataggagagatg
agcttcctacagcacaacaaatgtgaatgcagaccaaagaaagatagagcaagacaagaa
aaaaaatcagttcgaggaaagggaaaggggcaaaaacgaaagcgcaagaaatcccggtat
aagtcctggagcgtgtacgttgatgtgacaagccgaggcggtgagccgggcaggaggaag
gagcctccctcagggtttcgggaaccagatctctcaccaggaaagactgatacagaacga
tcgatacagaaaccacgctgccgccaccacaccatcaccatcgacagaacagtccttaat
ccagaaacctga

>gi568815592f:43670708_43882087|GENSCAN_predicted_peptide_5|635_aa
GVLQVPLPSISPSPAASGGTAQSPMSVVLAGLSTAVSQLLAMGRLLTRRLHGRLGLIGSK
HWAYFRAGLAAPDATDREKNLQGDTWDPRNAGGQALERWGGIGCPSQTTGHPGGISQYMV
SCSWTITLSVEATHSALEGDPLRCVVNSHSNQREPVKVALIGVCIPQVCNAEKEKQRTGR
LQGTQGQGTRLAGETQGLTVYSGDSSPGSVIRPHASEVLKMTERFSTRILNQGAGCDADS
FGSHVPLLGWGDSHSPACCEKEEVYVTAQRLQALKCFSDITRDSMDVSGVKIILCPSDMG
YQGYNEQMRKTRASHAGQSGTSPPPAPSQPPSLPITHCHLTPPATLPESIQEKAKVFRTR
SLLSGRGLKSSVITRQIHPFTEHMLSTHYMPGPMLVLALNEFFACQSLIPVSTRRQRALS
LPASPVALQPSVAVMEQGVLMQGIATTVPPPCEPGPQTGGLLDQLEGAEDFHLGMTCSSY
HLFLFCNIINNQPLGETPSLHFIPFSPDWPVGEPQSHVVLQSCWALKEEALKFLSQQPGS
RLTLPLTGCMTLELPTFYIKTGWMGSPRTSSAKMEGLCPQHNKEGEQEEDEGESQEGELS
WAASSNNVSLLFAGTSASGLLGNSEAEPVSSSLYL

>gi568815592f:43670708_43882087|GENSCAN_predicted_CDS_5|1908_bp
ggggtgctgcaagttcctctgcccagcatctccccctccccagcagcatctggtggaaca
gcccagtcccctatgtctgtggttctggcaggactgtcaactgctgtgtcccagctcctg
gccatggggcgcctgcttacccgaaggctccatgggaggctgggcctcataggaagcaag
cactgggcatacttcagggctgggttagcagcgccagatgctacagacagggagaagaat
cttcagggggatacctgggaccccaggaatgcaggggggcaggcactggaaagatggggg
gggatcggctgccccagccagacaactggccatccaggtggcatcagccagtacatggtt
tcctgcagctggaccataactctgagtgtggaggccacacactcagcccttgaaggagac
ccacttcgctgtgtggtgaattcacacagcaaccagagagagcctgttaaagtggctctc
ataggagtttgcatccctcaagtatgcaatgcagagaaggaaaaacagaggactggccgg
ctgcagggcacacagggccaaggcaccaggttggcaggagaaactcagggcctgactgtt
tatagtggggatagctccccaggctctgtcatcagacctcacgcaagtgaggtcctcaag
atgactgagcgcttcagcaccaggattcttaaccaaggagcaggctgtgatgctgactcc
tttggctctcacgtccctctcctgggctggggtgacagccacagccctgcttgctgcgag
aaggaggaagtgtatgtgacagcccagcgtctgcaagcgctcaagtgtttttctgacatc
acccgggacagcatggatgtttcaggtgtcaagatcattttatgtccttcagacatgggg
taccaaggatacaatgaacagatgcgtaagacaagagccagccatgcaggacaaagtggt
acctctccacccccagcccccagccagcctccaagcctccccatcacccactgccacctg
acaccacctgccacactgcccgagagcatccaagaaaaggccaaagtcttcagaacaagg
tccctgctgagtgggagggggcttaaatcatctgtcatcacacgtcaaattcacccattc
accgaacacatgctgagcacccactacatgccaggccctatgctggtgctggcccttaac
gagttctttgcctgccaatctctgatcccggtgtctacacgcaggcaacgggccctctca
ctgccagctagtcctgtggctttgcagccctcggtagcagtgatggaacagggggtgctg
atgcaggggatagccactactgtccctcctccttgtgaaccaggaccacaaacaggaggc
cttctagatcagctggaaggagctgaggatttccacttgggcatgacctgttcctcctac
cacctcttcctcttctgcaatatcattaacaaccaacctttaggggaaactccctctctt
cacttcattcccttcagcccagactggccagtgggagagccccagagccatgtggtgctg
caatcctgctgggcactcaaagaagaagccctgaaatttctcagccagcagccaggttcc
cggctcactctgccactcacaggctgcatgaccctggagcttcccaccttctatatcaag
acaggatggatgggttcccccaggaccagctcagccaaaatggaaggactttgcccccag
cacaacaaggaaggggagcaggaagaggatgagggcgagtcccaggaaggggagctgtca
tgggctgcttcttccaacaatgtgtctcttctcttcgccgggacatctgccagtggtctc
ctgggcaactcagaagcagagccggtgtcctcatccctgtacctgtga