GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:40:29

Sequence gi568815592f:25626909_25827289 : 200381 bp : 38.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2490   2556   67  2  1   71   96    35 0.371   3.89
 1.02 Term +   4631   4857  227  0  2   69   54   122 0.867   2.86
 1.03 PlyA +   6486   6491    6                               1.05

 2.04 PlyA -   7079   7074    6                               1.05
 2.03 Term -   8107   7997  111  1  0   90   40   107 0.652   3.68
 2.02 Intr -  14191  14063  129  1  0   74   85    70 0.646   5.27
 2.01 Init -  14755  14723   33  1  0   80   86    17 0.579   0.63
 2.00 Prom -  15316  15277   40                              -6.25

 3.00 Prom +  21221  21260   40                              -8.05
 3.01 Init +  25496  25577   82  1  1   94  101   136 0.999  14.90
 3.02 Intr +  27922  28043  122  2  2   76   80    80 0.972   5.29
 3.03 Intr +  34644  34736   93  2  0   87   78   143 0.992  12.44
 3.04 Intr +  38035  38124   90  0  0  117  109    53 0.929   9.57
 3.05 Intr +  42603  42659   57  2  0   92   77    78 0.901   5.26
 3.06 Intr +  43091  43168   78  1  0   83  115    46 0.894   5.63
 3.07 Term +  45907  46023  117  0  0   47   53    77 0.182  -2.34
 3.08 PlyA +  48127  48132    6                               1.05

 4.03 PlyA -  48297  48292    6                               1.05
 4.02 Term -  48711  48691   21  0  0   91   43    53 0.517  -1.57
 4.01 Init -  52056  51910  147  0  0   71   49   176 0.807  12.14
 4.00 Prom -  52717  52678   40                              -8.65

 5.00 Prom +  52752  52791   40                              -2.95
 5.01 Init +  58133  58273  141  1  0   36   44   175 0.777   8.08
 5.02 Intr +  62565  62624   60  2  0  111   81    60 0.815   5.61
 5.03 Intr +  64148  64216   69  1  0   82  109   100 0.821   9.96
 5.04 Term +  74299  74427  129  0  0  114   36   148 0.993   9.40
 5.05 PlyA +  74850  74855    6                               1.05

 6.00 Prom +  96553  96592   40                              -3.65
 6.01 Init + 100001 100380  380  1  2   70   82   442 0.851  38.22
 6.02 Intr + 104946 105225  280  0  1   17   27   351 0.886  18.46
 6.03 Term + 105550 105837  288  0  0   15   46   442 0.885  27.09
 6.04 PlyA + 106612 106617    6                               1.05

 7.02 PlyA - 108705 108700    6                               1.05
 7.01 Sngl - 132434 131877  558  2  0   81   47   211 0.965  12.18
 7.00 Prom - 132938 132899   40                              -8.25

 8.00 Prom + 133476 133515   40                              -6.95
 8.01 Init + 135055 135145   91  0  1   67   93   104 0.958   9.50
 8.02 Intr + 142077 142282  206  1  2  123  115   155 0.896  19.70
 8.03 Intr + 143159 143392  234  1  0   60   81   193 0.965  12.76
 8.04 Intr + 143476 143563   88  0  1   79   93    34 0.800   1.62
 8.05 Intr + 144018 144104   87  1  0   84   97    30 0.621   2.52
 8.06 Intr + 146675 146766   92  0  2   45   95    53 0.392   0.49
 8.07 Intr + 149687 149819  133  1  1   57   87    52 0.726   1.30
 8.08 Intr + 149904 150051  148  1  1  109   62   106 0.836   8.47
 8.09 Intr + 151018 151108   91  1  1   80   94    65 0.989   5.38
 8.10 Term + 152146 152280  135  0  0  122   53   100 0.999   6.94
 8.11 PlyA + 153916 153921    6                               1.05

 9.00 Prom + 158634 158673   40                              -5.85
 9.01 Init + 159421 159751  331  0  1   70    9   213 0.568   9.12
 9.02 Intr + 159867 159956   90  1  0   69   68    87 0.535   3.85
 9.03 Term + 165610 165824  215  2  2    8   42   129 0.135  -3.29
 9.04 PlyA + 166934 166939    6                               1.05

10.10 PlyA - 167409 167404    6                               1.05
10.09 Term - 172011 171877  135  0  0   71   49   109 0.790   2.34
10.08 Intr - 174072 173982   91  2  1   50  110    28 0.372   0.28
10.07 Intr - 184637 184490  148  0  1   75   91    25 0.470  -0.13
10.06 Intr - 184862 184730  133  2  1   73  115    92 0.926   9.70
10.05 Intr - 186084 185923  162  0  0  101  107    31 0.913   5.55
10.04 Intr - 186305 186187  119  0  2   64   75    75 0.925   3.06
10.03 Intr - 192690 192603   88  0  1   72  103    66 0.950   5.12
10.02 Intr - 193007 192774  234  2  0   99   67   168 0.992  12.76
10.01 Init - 199621 199553   69  1  0   84   83    32 0.449   3.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:25626909_25827289|GENSCAN_predicted_peptide_1|97_aa
MKVRPLTSTQDGCERSTHLQNSGTVQASFWELEEVTWLFFHNMEGVQSKAGHQDRCMCPV
ALPPALSMGCVLCSGSRWCRVADLCLVEPLNVGFSPC

>gi568815592f:25626909_25827289|GENSCAN_predicted_CDS_1|294_bp
atgaaagtccggcccctcacctcaactcaggatggctgtgaaaggtcaacccatcttcag
aactcagggactgtgcaggctagcttttgggaactggaagaagtaacttggcttttcttc
cacaacatggaaggtgtccagagcaaagctgggcatcaagacaggtgtatgtgtccagtg
gctctgccacctgccctcagcatgggctgtgttctgtgctccggcagccggtggtgcaga
gtggctgatctttgcctggtggagccattgaatgttggcttttctccttgctga

>gi568815592f:25626909_25827289|GENSCAN_predicted_peptide_2|90_aa
MAVVGDRALRKVACPASDPNTKEQSLLLLRHPTPPLESSGKIAFNKIYALQCSNMVNRTT
GTFSWLHRSKNGVSGARMETLVREWSLVQE

>gi568815592f:25626909_25827289|GENSCAN_predicted_CDS_2|273_bp
atggctgtagttggagatagggccttgaggaaggtggcgtgtccagcctctgacccaaat
accaaggaacaaagtctcctcctccttaggcatcccactccacctttggagagctcaggg
aaaattgccttcaacaaaatctacgccctgcagtgctccaacatggtcaacagaactaca
gggaccttcagctggctgcataggtcaaagaatggagtctctggtgcaagaatggagact
ctggtgcgagaatggagtctggtgcaagaatag

>gi568815592f:25626909_25827289|GENSCAN_predicted_peptide_3|212_aa
MDSSREPTLGRLDAAGFWQVWQRFDADACEVKGSADEKDRDTSPFFPLVRPLAHTPLYPS
FLYLHKLQDTVMKANLHKVKQQFMTTQDASKDGRIRMKELAGMFLSEDENFLLLFRRENP
LDSSVEFMQIWRKYDADSSGFISAAELRNFLRDLFLHHKKAISEAKLEEYTGTMVMEDGN
LDSGEVAEEVRTKYILKIDLRRFPDESGGSQG

>gi568815592f:25626909_25827289|GENSCAN_predicted_CDS_3|639_bp
atggacagctcccgggaaccgactctggggcgcttggacgccgctggcttctggcaggtc
tggcagcgctttgatgcggatgcctgtgaagtgaaaggatcagcagacgagaaggataga
gacacaagtcccttctttcctctggtcagaccacttgcgcacactcctctttatccttca
ttcttgtacctacacaagctacaggacacggtcatgaaagcaaatttgcacaaggtgaaa
cagcagtttatgactacccaagatgcctctaaagatggtcgcattcggatgaaagagctt
gctggtatgttcttatctgaggatgaaaactttcttctgctctttcgccgggaaaaccca
ctggacagcagcgtggagtttatgcagatttggcgcaaatatgacgctgacagcagtggc
tttatatcagctgctgagctccgcaacttcctccgagacctctttcttcaccacaaaaag
gccatttctgaggctaaactggaagaatacactggcaccatggtgatggaagatggcaac
ttggactcaggtgaggtggcagaagaggtgagaactaaatatattttgaagatagacttg
agaagatttcctgatgaatcaggtgggagtcaaggatga

>gi568815592f:25626909_25827289|GENSCAN_predicted_peptide_4|55_aa
MIVTVKSFQYILAKLPDDAPSKTPAGTAKEDKGKAKKTALTAAEKAKDLDLGGRE

>gi568815592f:25626909_25827289|GENSCAN_predicted_CDS_4|168_bp
atgattgtaactgtgaagagttttcaatatatcttggccaagctgccagatgatgcacct
tccaaaacacctgctgggacagccaaggaagacaaggggaaggcaaagaagacagcactg
acagctgcggagaaggccaaggacctagatttaggaggacgagagtga

>gi568815592f:25626909_25827289|GENSCAN_predicted_peptide_5|132_aa
MLVAGFKVEEEAKECRQPLEPEKGKGKDSPREPPEGMRPCRQLEFCPACSTEERKRDFEK
IFAYYDVSKTGALEGPEVDGFVKDMMELVQPSISGVDLDKFREILLRHCDVNKDGKIQKS
ELALCLGLKINP

>gi568815592f:25626909_25827289|GENSCAN_predicted_CDS_5|399_bp
atgctagttgctggctttaaagtggaagaagaggctaaagaatgtaggcagcctctagaa
cctgaaaaaggcaagggaaaggattctccccgagaacctccagaaggaatgaggccgtgt
cgacagcttgaattttgcccagcttgttctactgaagaaaggaaaagggactttgagaaa
atctttgcctactatgatgttagtaaaacaggagccctggaaggcccagaagtggatggg
tttgtcaaagacatgatggagcttgtccagcccagcatcagcggggtggaccttgataag
ttccgcgagattctcctgcgtcactgcgacgtgaacaaggatggaaaaattcagaagtct
gagctggctttgtgtcttgggctgaaaatcaacccataa

>gi568815592f:25626909_25827289|GENSCAN_predicted_peptide_6|315_aa
MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA
MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV
TKYTSSKQQQAHGRLDLPGGDGRALVIMRQAGSLTGNALKNVTNKRIHDTHGLGRDSSVR
VDLLQQLVDVNRIALFAASLALFVLLRVLATAFLKPFSEMGNSGEGYALFIQRGSAVPRG
RCQRAAQQGQRCREGRGLHASVPAGGSGVPGLRHPGVGGQRRRNKKKTRIIPRHLQLAIR
NDKELDKLLARVTMA

>gi568815592f:25626909_25827289|GENSCAN_predicted_CDS_6|948_bp
atgccggaggtgtcatctaaaggtgctaccatttccaagaagggctttaagaaagctgtc
gttaagacccagaaaaaggaaggcaaaaagcgcaagaggacccgtaaggagagttattct
atttacatctacaaagtgctaaagcaggtccatccggacactggcatctcttcgaaagct
atgagcattatgaattccttcgtcactgatatctttgagcgtatagcgagcgaggcatca
cgtttggctcactacagcaagcgctccaccatttcttccagagagattcagacagcagtg
cgcttgctactgccgggagagctggctaaacatgctgtgtctgagggcaccaaggctgtc
actaagtacaccagctccaagcagcagcaggcgcacggccgtctggatctccctggaggt
gatggtcgagcgcttgtcataatgcgccaggcgggaagcctcacaggcaatgcgctcaaa
aatgtcactaacaaaagaattcatgatactcatggccttggaagagattccagtgtccgc
gtggacctgcttcagcagcttgtagatgtaaatagaatagctctctttgcggcatctctt
gcgctttttgtcctccttcgagttttagcaactgccttcttaaagcccttttcggaaatg
ggaaactcgggggaagggtacgcgctattcattcagagaggttctgcagttccccgtggg
cggtgtcaacgggctgctcagcaagggcaacgatgccgagagggtcgggggctgcacgct
agcgtacctgccggcggttctggagtacctggcctccgacaccctggagttggcgggcaa
cgccgtcggaacaagaagaagacccgcatcatcccgcgccacctgcagctggccatccgc
aacgacaaggagctcgacaagctgctggcccgagtgacaatggcttag

>gi568815592f:25626909_25827289|GENSCAN_predicted_peptide_7|185_aa
MDLNYTLEQIDLTDIYRTLYPTTAEYTFYSSAHGTFSKTDHMIGHKTSLNKFKEIEIISS
TPSDHSRIKLEINSKRNSQSCANTWKLNKLLLNDHWLNNEIKMKIKKFFELNDNRDITYQ
NLWDTAKAVLRGKFIPLNAYIKKSERAQIDNLSLHLKELEKQEQTKPKPSRRKEITKIRA
KLSGN

>gi568815592f:25626909_25827289|GENSCAN_predicted_CDS_7|558_bp
atggacttaaactataccctagaacaaatagacttaacagatatttacagaacactctac
ccaacaactgcagaatatacattctattcatcagcacatgggacattctccaagacagac
catatgataggccacaaaacaagtctcaacaaatttaaggaaatcgaaattatatcaagt
actccctcagaccacagcagaataaaattggaaatcaactccaaaaggaactctcaaagc
tgtgcaaatacatggaaattaaataagctgctcctaaatgatcattggctcaacaatgaa
atcaagatgaaaattaaaaaattctttgaactgaacgacaaccgtgacataacctatcaa
aacctctgggatacagcaaaagcggtgctaagaggaaagttcataccattaaatgcctac
atcaaaaagtctgaaagagcacaaatagacaatctaagtttacacctcaaggaactagag
aaacaagaacaaaccaaacccaaacccagcagaagaaaagaaataaccaagatcagagca
aaactaagtggaaattga

>gi568815592f:25626909_25827289|GENSCAN_predicted_peptide_8|434_aa
MSTGPDVKATVGDISSDGNLNVAQEECSRKGFCSVRHGLALILQLCNFSIYTQQMNLSIA
IPAMVNNTAPPSQPNASTERPSTDSQGYWNETLKEFKAMAPAYDWSPEIQGIILSSLNYG
SFLAPIPSGYVAGIFGAKYVVGAGLFISSFLTLFIPLAANAGVALLIVLRIVQGIAQVMV
LTGQYSIWVKWAPPLERSQLTTIAGSGSMLGSFIVLLAGGLLCQTIGWPYVFYIFVSYFC
EYWLFYTIMAYTPTYISSVLQANLRDSGILSALPFVVGCICIILGGLLADFLLSRKILRL
ITIRKLFTAIGVLFPSVILVSLPWVRSSHSMTMTFLVLSSAISSFCESGALVNFLDIAPR
YTGFLKGLLQVFAHIAGAISPTAAGFFISQDSEFGWRNVFLLSAAVNISGLVFYLIFGRA
DVQDWAKEQTFTHL

>gi568815592f:25626909_25827289|GENSCAN_predicted_CDS_8|1305_bp
atgtctaccggaccagatgtcaaggctacagtgggggacatttccagtgatggcaattta
aacgtggctcaagaggaatgctccaggaaaggtttttgttcagtccgacatgggctggcc
ctcatcttgcagctctgtaatttttcaatttacacccaacaaatgaacttgagcattgcc
atcccagctatggtgaacaacacagccccacctagccagcccaatgcttccacagaacgg
ccctccactgactcccagggctactggaatgaaactctaaaagaatttaaagcaatggcc
cctgcatatgactggagtcctgaaatccagggaatcatcctcagctccctcaactatggc
tcattcttggctccaatccccagtggctatgtggctggaatatttggagccaagtatgtg
gttggtgctggcttgtttatttcctcattcctgaccctcttcattccactggcagctaat
gcgggagtggccttgctcattgtcctccggattgtacaaggcatagcccaggttatggta
ttaactggtcagtattcaatttgggtcaaatgggctcccccactggaaaggagtcaactc
accaccattgctggatcagggtcaatgctggggtccttcattgttctacttgctggtggt
ctcctctgccagaccataggatggccttacgtcttctatatctttgtctcttatttctgt
gaatactggcttttttataccattatggcgtacacaccaacgtacatcagctcggtactt
caagccaacctcagagatagtgggatcctgtctgccttgccgtttgttgttggatgtatc
tgcattatccttggaggtctactggcagactttcttctctccagaaaaatcctcagactc
atcaccatcaggaaactcttcactgccattggggttctcttcccatccgtgatcctcgtg
tccctgccctgggtcagatccagccacagcatgaccatgaccttcttggtgctgtcttct
gccatcagcagcttctgtgaatcaggagcccttgttaacttcttggatattgctcctcgg
tacactggctttctcaaaggactattgcaagtctttgcacacatagctggagccatctct
cctactgctgctggatttttcatcagtcaggattcagagtttggttggagaaatgtcttc
ttgctttcagctgctgttaacatatcgggcctggttttctacctcatctttggccgagca
gatgtgcaggactgggctaaagagcagacattcacccacctctga

>gi568815592f:25626909_25827289|GENSCAN_predicted_peptide_9|211_aa
MGQLLAFLRNLGVRGSDFPPEEQGRKTLTTAFEVDKTSPFCWTRGYMRVSHGLDAGHRGL
IARPKGPPRREKGYPQREICVEWICDAKEMGSWKNQVHFLPCQPLMHEEKGGVRGGVSIL
ADEEKSQTEESAHTPLPEGEDPHQDHADPTSFICIKELNEDLSRNLCYKTRAFLLISETF
QFNVDKILPHPPPCQAFQSRNKHSLVAKAKI

>gi568815592f:25626909_25827289|GENSCAN_predicted_CDS_9|636_bp
atgggtcagctgttggctttcctgaggaatctgggagtgaggggctctgattttccaccc
gaggaacaaggcagaaagacactgaccactgcatttgaagtggacaagacctctccattt
tgttggaccagaggctacatgcgtgtttcccatggattagatgcaggtcacagaggactg
atagccaggcccaagggaccacctagaagggagaagggatatccacaaagggagatttgt
gtggagtggatctgtgatgccaaggagatgggcagctggaaaaaccaagtgcatttcctg
ccttgtcagcctcttatgcatgaagaaaagggaggggtcagaggtggggtcagcatccta
gcggatgaggagaaaagccagacagaagaaagtgctcacacccctctccctgaaggagaa
gacccccatcaggatcatgctgacccaacatccttcatttgcataaaggaactgaatgag
gacctgagcaggaacctttgctataaaaccagagccttccttttgatctctgaaacgttt
caatttaatgtggacaaaatcctaccccatcctcctccttgtcaagctttccaatctcgt
aataaacactctttagttgctaaagccaaaatctag

>gi568815592f:25626909_25827289|GENSCAN_predicted_peptide_10|392_aa
MVNSTDPHGLPNTSTKKLLDNIKNPMYNWSPDIQGIILSSTSYGVIIIQVPVGYFSGIYS
TKKMIGFALCLSSVLSLLIPPAAGIGVAWVVVCRAVQGAAQGIVATAQFEIYVKWAPPLE
RGRLTSMSTSGACGCAVCLLWFVLFYDDPKDHPCISISEKEYITSSLVQQVSSSRQSLPI
KAILKSLPVWAISTGSFTFFWSHNIMTLYTPMFINSMLHVNIKENGFLSSLPYLFAWICG
NLAGQLSDFFLTRNILSVIAVRKLFTAAGFLLPAIFGVCLPYLSSTFYSIVIFLILAGAT
GSFCLGGVFINGLDIAPRYFGFIKACSTLTGMIGGLIASTLTGLILKQDPESAWFKTFIL
MAAINVTGLIFYLIVATAEIQDWAKEKQHTRL

>gi568815592f:25626909_25827289|GENSCAN_predicted_CDS_10|1179_bp
atggtgaatagcacagatccacatggtttgcccaacacctccacaaagaagctcctggat
aatataaagaaccctatgtataattggagcccagatatccagggaatcatcttgagttcc
acctcctatggtgtcatcatcatccaagttcctgttggatacttctctggaatatattct
acaaagaaaatgattggctttgcattatgcctcagctctgtgttaagcctgctcatccca
ccagcagctggaattggagtagcttgggtcgttgtatgtcgagcagttcagggagcagcc
caggggatagttgcaacagcccagtttgaaatatatgtcaaatgggctcctcccctggaa
cgaggccgacttacttctatgagtacatcaggtgcttgtggctgtgccgtatgtcttctc
tggttcgttctgttttatgatgaccccaaagaccacccatgtataagcatcagtgaaaag
gaatacatcacatcctccctggtccagcaggtcagttcaagtagacaatctctgcctatc
aaggctatacttaagtcgcttccagtctgggctatttccactggtagttttacgtttttc
tggtcacataacatcatgacactatacactccaatgtttatcaactccatgcttcatgtt
aatataaaagagaatgggttcttgtcttcccttccctatttgtttgcctggatctgtggt
aacctagcaggtcagttatcagacttcttcctgaccaggaatattctcagcgtaattgct
gtccggaaactcttcacagcagcaggatttctccttcctgcaatctttggtgtctgcctg
ccttacctgagttccaccttctacagcattgtcattttcctaatacttgctggtgcaaca
ggcagcttttgcttgggtggagtgtttataaatggcttggatattgctcccagatatttt
ggatttattaaagcatgttcaactttaactggaatgataggaggactaattgcttccact
ttgactggattgatccttaagcaggatccggaatccgcctggtttaaaaccttcatcctg
atggcagccattaatgtgactggcctaattttctaccttatagttgctacagcagaaatt
caggactgggctaaagaaaaacaacacacacgtctctga