GENSCAN 1.0	Date run:  6-Nov-116	Time: 07:51:10

Sequence gi568815592r:18021422_18222606 : 201185 bp : 42.41% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6443   6543  101  0  2   79  110    98 0.410  10.01
 1.02 Intr +  14064  14227  164  2  2   33   92    96 0.090   2.35
 1.03 Intr +  15270  15375  106  0  1   44  116    51 0.669   2.80
 1.04 Intr +  21800  22005  206  1  2   23   96   195 0.144  10.88
 1.05 Intr +  43914  44010   97  0  1   85  105    51 0.172   5.59
 1.06 Term +  49363  49443   81  0  0   50   43   114 0.052  -0.19
 1.07 PlyA +  49654  49659    6                               1.05

 2.00 Prom +  54066  54105   40                              -3.35
 2.01 Init +  71164  71326  163  0  1   67   92    72 0.414   5.44
 2.02 Intr +  74629  74744  116  2  2   77  113    56 0.834   6.25
 2.03 Intr +  76605  76752  148  2  1   19   54   145 0.612   3.09
 2.04 Term +  80560  80774  215  2  2   26   49   164 0.346   2.71
 2.05 PlyA +  82336  82341    6                               1.05

 3.00 Prom +  85195  85234   40                              -5.25
 3.01 Init +  96509  96632  124  1  1   65   89   179 0.976  16.08
 3.02 Term +  96971  97152  182  0  2    8   54   108 0.709  -3.81
 3.03 PlyA +  99458  99463    6                               1.05

 4.02 PlyA -  99896  99891    6                              -1.75
 4.01 Sngl - 101185  99998 1188  1  0  111   45  1101 0.999 103.76
 4.00 Prom - 108429 108390   40                              -7.85

 5.03 PlyA - 109231 109226    6                               1.05
 5.02 Term - 109359 109243  117  0  0  126   53    25 0.703   0.36
 5.01 Init - 112126 111989  138  1  0   78   64   152 0.134  11.99
 5.00 Prom - 115902 115863   40                              -4.15

 6.06 PlyA - 116177 116172    6                               1.05
 6.05 Term - 117616 117538   79  0  1  101   42   100 0.008   2.96
 6.04 Intr - 118296 118244   53  0  2   71   96    -5 0.613  -4.61
 6.03 Intr - 122307 122175  133  2  1   47   76   141 0.835   8.53
 6.02 Intr - 126494 126402   93  1  0  136   60    71 0.970   7.26
 6.01 Init - 127706 127567  140  2  2   66   52   197 0.996  13.56
 6.00 Prom - 130303 130264   40                              -8.45

 7.03 PlyA - 132807 132802    6                               1.05
 7.02 Term - 135100 134325  776  2  2   26   36   542 0.479  35.35
 7.01 Init - 139859 139787   73  2  1   87   42    42 0.015   0.78
 7.00 Prom - 153863 153824   40                              -4.25

 8.02 PlyA - 154090 154085    6                               1.05
 8.01 Sngl - 155294 154782  513  2  0   25   38   475 0.871  31.99
 8.00 Prom - 160578 160539   40                              -8.05

 9.00 Prom + 161083 161122   40                              -3.95
 9.01 Init + 163502 163519   18  1  0   86   77     3 0.748  -0.89
 9.02 Intr + 166371 166581  211  2  1   94   93   204 0.908  19.06
 9.03 Intr + 169782 169960  179  1  2   32  106   202 0.550  15.12
 9.04 Intr + 175636 175812  177  0  0   47   51   151 0.859   6.49
 9.05 Intr + 176166 176240   75  2  0   86   97    65 0.981   5.99
 9.06 Intr + 179018 179155  138  1  0  113   89   110 0.998  13.34
 9.07 Intr + 180065 180236  172  1  1   44   64   164 0.995   8.19
 9.08 Intr + 184116 184243  128  1  2   85   85   135 0.992  12.38
 9.09 Intr + 185339 185440  102  1  0  102   33    50 0.556   0.35
 9.10 Intr + 185977 186108  132  0  0  113   81    89 0.997  10.62
 9.11 Intr + 186711 186911  201  2  0   59  119    78 0.868   6.56
 9.12 Intr + 191067 191183  117  2  0  108   57   102 0.994   8.84
 9.13 Intr + 192235 192360  126  0  0  117   98    88 0.999  12.66
 9.14 Intr + 193586 193708  123  1  0   88   94   138 0.665  14.26
 9.15 Intr + 196312 196464  153  0  0   60   64   145 0.382   8.65
 9.16 Intr + 200607 200831  225  2  0   78  101    67 0.245   4.26

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 117616 117542   75  0  0  101  115    96 0.830  11.31
S.002 Init - 138113 138065   49  2  1   65   97    10 0.822   0.76
S.003 Intr + 139906 140033  128  0  2   53   66   154 0.880   8.26
S.004 Term + 144846 145035  190  0  1   87   49   160 0.871   7.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:18021422_18222606|GENSCAN_predicted_peptide_1|251_aa
XRVGGYWYEWSWSRMSCDSGVREWKFGMTDRLLRTLPLTMSHTKPTWFLGHLFVTPGLYH
CHPICPAAPPLPPPTDAVPVLTTLRGEHCDTNWQLEISHGGGSIYTMEIGKCYKLGYWQV
YIWKVRGSIRSHIHKRLVENMLPNPTTLTSGCQWAGPMEPAQQSTVVPGGHADCSSQGFS
CFTSAPLQSSVAGPWEPLLNQGSPTLGPWTSTSWWPVRNWATQQEFLAEDSLDEYDFSEI
DNSDDSDVSSV

>gi568815592r:18021422_18222606|GENSCAN_predicted_CDS_1|756_bp
nggagagttggagggtactggtatgaatggtcatggtccaggatgtcctgtgactctggt
gtgagggagtggaaatttggcatgacagataggctgttgaggactctgccacttaccatg
tcccacaccaagcccacgtggttcctggggcatttgtttgtgactcctggtttataccat
tgtcatcccatctgtcctgctgctcctcccctgccaccacccacagacgctgtccctgtc
ctcaccactctccgtggagaacactgtgacacaaattggcagcttgaaatcagccatggt
ggtggcagtatttacaccatggaaattggcaaatgctacaaattaggctattggcaggta
tatatatggaaggtcagaggctccatccggtcccacatccataagaggctggtggaaaac
atgctgcctaaccccaccactttgacaagtggatgtcagtgggcagggcccatggagcct
gctcagcagagcactgttgttcctggaggccatgctgactgcagcagtcaaggctttagc
tgctttaccagtgctcccctccagagctccgtggcaggcccttgggaaccactgctaaac
caggggtccccaaccctggggccgtggaccagtaccagttggtggcctgttaggaactgg
gccacacagcaggagtttttggccgaagattcacttgatgaatatgatttttctgaaata
gacaattctgatgattcagatgttagttctgtttag

>gi568815592r:18021422_18222606|GENSCAN_predicted_peptide_2|213_aa
MGNVGIFHWPSEHHTPWEVKYREKWRNGGMEEMAYIGSGAAEWGTDGAGKLPAYTYLVVQ
AGQVLKSGSVTGLGCNMTRERSVFNENILSPNHTELARDIVSSERFTLQVKATHKETEKR
NHSQRSNQIQKLGETGGSMKIEDIRQENLYKRPLILLLLGQKPASECASRKAAGGSHSPH
EEDGNALTWLEERVWDTSEGHMLTGSLLLMVIA

>gi568815592r:18021422_18222606|GENSCAN_predicted_CDS_2|642_bp
atggggaatgttggcatttttcactggccttcagagcaccataccccctgggaagtgaag
tacagggagaaatggagaaatggaggaatggaggagatggcctatattggaagtggggct
gcagaatgggggactgatggggctggaaagcttccagcttatacttacctggtggtccag
gctggccaagtccttaaatctgggtcagttacagggcttggatgcaacatgacaagggaa
agaagtgtgttcaacgagaacattctgagtccaaaccacacagaactcgccagagacatt
gtctcatcagaacgcttcaccctgcaagtaaaggccacacacaaagagactgagaaaagg
aaccacagccagagaagcaaccaaatacagaaacttggagaaacaggagggagtatgaaa
attgaagacatcaggcaggaaaacctgtataagaggcctcttatacttctcctgctgggg
cagaagccagcttcagagtgtgccagcaggaaagctgcaggtggtagccattctccccat
gaggaagatggtaatgcgttaacttggctggaagagagagtatgggacacaagtgaaggt
catatgctgacgggaagccttttattgatggtgattgcatga

>gi568815592r:18021422_18222606|GENSCAN_predicted_peptide_3|101_aa
MVRGDHVIENLAADGWLMMGQFFLEVAVGTEDTMVIQYSSCELDLVEGRFMSVNQVFYKM
PRKEIEKAKSRRQVQKAEQGQKQETVQGSGIGQNWNRWRVT

>gi568815592r:18021422_18222606|GENSCAN_predicted_CDS_3|306_bp
atggtccgaggggatcatgtaatagaaaacctggctgctgacggctggcttatgatggga
cagtttttcttagaagtggctgtgggcacagaagacaccatggttattcagtacagtagt
tgtgagctagatttggtagaggggagatttatgagtgtgaaccaagttttttacaaaatg
ccaaggaaagagattgagaaagccaagtccaggcggcaagtccagaaggcagaacaaggt
caaaagcaggagacagtccaaggatcgggaattgggcaaaattggaacagatggagggtg
acgtga

>gi568815592r:18021422_18222606|GENSCAN_predicted_peptide_4|395_aa
MAAEASESGPALHELMREAEISLLECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALAH
PRTLALECPFCRRACRGCDTSDCLPVLHLIELLGSALRQSPAAHRAAPSAPGALTCHHTF
GGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGDAAQDIRYPVDV
TITNDCHVVVTDAGDRSIKVFDFFGQIKLVIGGQFSLPWGVETTPQNGIVVTDAEAGSLH
LLDVDFAEGVLRRTERLQAHLCNPRGVAVSWLTGAIAVLEHPLALGTGVCSTRVKVFSSS
MQLVGQVDTFGLSLYFPSKITASAVTFDHQGNVIVADTSGPAILCLGKPEEFPVPKPMVT
HGLSHPVALTFTKENSLLVLDTASHSIKVYKVDWG

>gi568815592r:18021422_18222606|GENSCAN_predicted_CDS_4|1188_bp
atggcggccgaagcctcggagagcgggccagcgctgcatgagctcatgcgcgaggcggag
atcagcctgctcgagtgcaaggtgtgctttgagaagtttggccaccggcagcagcggcgc
ccgcgcaacctgtcctgcggccacgtggtctgcctggcctgcgtggccgccctggcgcac
ccgcgcactctggccctcgagtgcccattctgcaggcgagcttgccggggctgcgacacc
agcgactgcctgccggtgctgcacctcatagagctcctgggctcagcgcttcgccagtcc
ccggccgcccatcgcgccgcccccagcgcccccggagccctcacctgccaccacaccttc
ggcggctgggggaccctggtcaaccccaccggactggcgctttgtcccaagacggggcgt
gtcgtggtggtgcacgacggcaggaggcgtgtcaagatttttgactcagggggaggatgc
gcgcatcagtttggagagaagggggacgctgcccaagacattaggtaccctgtggatgtc
accatcaccaacgactgccatgtggttgtcactgacgccggcgatcgctccatcaaagtg
tttgatttttttggccagatcaagcttgtcattggaggccaattctccttaccttggggt
gtggagaccacccctcagaatgggattgtggtaactgatgcggaggcagggtccctgcac
ctcctggacgtcgacttcgcggaaggggtccttcggagaactgaaaggttgcaagctcat
ctgtgcaatccccgaggggtggcagtgtcttggctcaccggggccattgcggtcctggag
caccccctggccctggggactggggtttgcagcaccagggtgaaagtgtttagctcaagt
atgcagcttgtcggccaagtggatacctttgggctgagcctctactttccctccaaaata
actgcctccgctgtgacctttgatcaccagggaaatgtgattgttgcagatacatctggt
ccagctatcctttgcttaggaaaacctgaggagtttccagtaccgaagcccatggtcact
catggtctttcgcatcctgtggctcttaccttcaccaaggagaattctcttcttgtgctg
gacacagcatctcattctataaaagtctataaagttgactgggggtga

>gi568815592r:18021422_18222606|GENSCAN_predicted_peptide_5|84_aa
MDDPDTEEKSHESYWEEGGMWLDIAYPYHPSGSDVLDRCLHIHKHGVKYAIYVVLRRLML
LKNDIKVGELTVFLKSYIYLQKSK

>gi568815592r:18021422_18222606|GENSCAN_predicted_CDS_5|255_bp
atggatgatcctgatacagaagagaaatctcatgagtcctattgggaagaaggaggaatg
tggttggatattgcatatccgtatcacccaagtggtagtgatgtgttggacagatgcctt
cacatacacaagcacggggtaaaatatgcaatatacgttgtcttgagaaggttgatgctt
ttgaagaacgacataaaagttggggaattgactgtctttttgaaaagttatatctactta
cagaaaagtaaatga

>gi568815592r:18021422_18222606|GENSCAN_predicted_peptide_6|165_aa
MDGTRTSLDIEEYSDTEVQKNQVLTLEEWQDKWVNGKTAFHQEQGHQLLKKHLDTFLKGK
SGLRVFFPLCGKAVEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKV
FKSSSGNISLYCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKW

>gi568815592r:18021422_18222606|GENSCAN_predicted_CDS_6|498_bp
atggatggtacaagaacttcacttgacattgaagagtactcggatactgaggtacagaaa
aaccaagtactaactctggaagaatggcaagacaagtgggtgaacggcaagactgctttt
catcaggaacaaggacatcagctattaaagaagcatttagatactttccttaaaggcaag
agtggactgagggtattttttcctctttgcggaaaagcggttgagatgaaatggtttgca
gaccggggacacagtgtagttggtgtggaaatcagtgaacttgggatacaagaatttttt
acagagcagaatctttcttactcagaagaaccaatcaccgaaattcctggaaccaaagta
tttaagagttcttcggggaacatttcattgtactgttgcagtatttttgatcttcccagg
acaaatattggcaaatttgacatgatttgggatagaggagcattagttgccatcaatcca
ggtgatcgcaaatggtaa

>gi568815592r:18021422_18222606|GENSCAN_predicted_peptide_7|282_aa
MTKDEGSLLKSQLSSKHEGQKHHGKAFSPTRLSATKIDLKTQNKTGQSLELCVYTWCGGF
PNWSGLGSPAGLPKGRLDFYVAGFHITEPQLSTAGSASSFLFHLSAARPLTNSYPNRATP
PPGLQSQRSYPSNLAMLIKSQRVVAVPENYYNTCKAVRAPGRTLSAGKNKRGSSYSRTVG
FSRGSDSPQEGAPNSRCQLQPPRFPRSFRKLFEVGEATAPGLTFALKRCRESRGKGTAVQ
KGNIVGGLADRQHRDEPGDPTPQHPSPGIPPSSDRYPPRTLF

>gi568815592r:18021422_18222606|GENSCAN_predicted_CDS_7|849_bp
atgactaaggatgaaggttcactactgaaatcacagctgagttctaaacatgaaggtcaa
aaacatcatggcaaagccttctctcccactcgcctttctgccactaaaatagatttaaaa
acacaaaacaaaactggtcaaagccttgagttatgtgtgtatacgtggtgtgggggattc
cccaactggagtggactggggagtcctgcaggcttacccaagggaagactggacttctat
gtggctggtttccacatcactgaaccccaactttctacagctgggtcggcctcttccttc
ctctttcacctgtcagctgcccggccgttgactaacagctaccctaatcgggccacccct
cctccaggtctccaatcccagaggagttaccccagcaacctggcaatgctcatcaagtct
caacgcgtggtggctgtgccagagaattactacaacacctgcaaggctgtgcgggctcct
ggccgcaccctatcggccgggaagaacaagcgagggagttcctactccaggaccgtgggg
ttctcccgcggctctgacagtccccaggagggagccccaaactcccggtgccagctgcag
ccgcctcgctttccgagaagctttcggaagcttttcgaagtcggagaagcaactgccccg
gggctcacctttgcgctgaagaggtgccgggagtctcggggaaaaggcaccgctgtacag
aaaggaaacattgtaggggggttagccgaccggcaacatcgcgacgaacccggcgacccc
acgccccaacaccctagcccgggaattcccccttcttcagacagatacccaccccgcacc
ctcttttaa

>gi568815592r:18021422_18222606|GENSCAN_predicted_peptide_8|170_aa
MIISIDAEKALDKIQQRFMIKTLSKIGIQGTYLNVIKAIYDKPTDNIILNGEELKAFPLR
PGTKQGCPISPLLFNIVLEVLARAIRQEKEIKGIQIGKEEVKLSLFADDMIVYPENPKDS
SRRLLELIKEVSKVSRYKINVHRSVALLYTNSDQAESQIKNSTPLPIAAK

>gi568815592r:18021422_18222606|GENSCAN_predicted_CDS_8|513_bp
atgatcatctcaatagatgcagaaaaagcactggacaaaatccagcaacgctttatgatt
aaaactctcagcaaaatcggcatacaagggacatacctcaatgtaataaaagccatctat
gacaaacccacagacaacataatactgaatggggaagagttgaaagcattccctctgaga
cctggaacaaaacaaggatgcccaatctcaccactcctcttcaacatagtactagaagtc
ctagccagagcaatcagacaagagaaagagataaagggcatccaaatcggtaaagaggaa
gtcaaactgtcactgtttgctgatgatatgatcgtttaccccgaaaatcctaaggactct
tccagaaggctcctagaactgataaaagaagttagcaaagtttccagatacaagattaat
gtacacagatcagtagctcttctatacaccaacagcgaccaagcagagagtcaaatcaag
aactcaacccctttaccaatagctgcaaaataa

>gi568815592r:18021422_18222606|GENSCAN_predicted_peptide_9|759_aa
MGGVTQRVLEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTNRAAATGN
ASPGKLEHSKAALSVHGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDPTMY
LALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLINTGVL
SVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSF
KGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHF
NALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYAC
GSNLHQRALGHFCGTVESETLLSRSQNRVSLQVWSVYLVKVSARSWDHNEFFAQFAGDHT
LLTPGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVRARAVQGWVE
TFAARGLEGRTNLSYQGVCLWESAWTLVGFLVLVTVPLALLQKGAIQFNPPLSEKKMKAI
NSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMS
VIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVK
TGGSGEAYDIIAEDIQGTVFFAGEMGKFESHVKPQFYKRGKKPSLHSKTEMFLRRYDNAN
LFHHSKSTDLKKPYKHLDLIAFSIGSTTAESLDFRIKQN

>gi568815592r:18021422_18222606|GENSCAN_predicted_CDS_9|2277_bp
atggggggtgttacccagagagtattggaagtttccaaccattggtggtactctatgctc
atcctacctcctttgctgaaagacagtgtggcagcgcccctgctgtctgcctactaccct
gactgtgttggcatgagcccctcctgcaccagcacaaaccgcgccgctgccactggcaat
gccagccctgggaagctggagcactccaaggctgccctctccgtgcacggcatgaaccga
tacttccagcctttctaccagcccaatgagtgtggcaaagccctctgtgtgaggccggat
gtgatggaactggatgagctctatgagtttccagagtattcccgagaccccaccatgtac
ctggctttgagaaacctcatcctcgcactgtggtatactaactgcaaagaagctcttact
cctcagaaatgtattcctcacatcatcgtccggggtctcgtgcgtattcgatgcgttcag
gaagtggagagaatactgtattttatgaccagaaaaggtctcatcaacactggagttctc
agcgtgggagccgaccagtatcttctccctaaggactaccacaataaatcagtcatcatt
atcggggctggtccagcaggattagcagctgctaggcaactgcataactttggaattaag
gtgactgtcctggaagccaaagacagaattggaggccgagtctgggatgataaatctttt
aaaggcgtcacagtgggaagaggagctcagattgtcaatgggtgtattaacaacccagta
gcattaatgtgtgaacaacttggcatcagcatgcataaatttggagaaagatgtgactta
attcaggaaggtggaagaataactgaccccactattgacaagcgcatggattttcatttt
aatgctctcttggatgttgtctctgagtggagaaaggataagactcagctccaagatgtc
cctttaggagaaaagatagaagaaatctacaaggcatttattaaggaatctggtatccaa
ttcagtgagctggagggacaggtgcttcagttccatctcagtaacctggagtacgcctgt
ggcagcaaccttcaccagagggccttgggtcatttctgtggaaccgtggagtcggaaaca
ctgctctcgagaagccaaaatagagtatccttgcaagtctggtctgtttaccttgttaaa
gtatctgctcgctcgtgggaccacaatgaattctttgcccagtttgctggtgaccacact
ctgctaactcccgggtactcggtgataattgaaaaactggcagaagggcttgacattcaa
ctcaaatctccagtgcagtgtattgattattctggagatgaagtgcaggttaccactaca
gatggcacagggtattctgcacaaaaggtaagagctagggcagtacaagggtgggtagaa
acctttgctgccaggggcttggagggaaggacaaatctttcctatcaaggagtttgcctt
tgggaatctgcctggacccttgttggatttctggtattagtcactgtaccactggcttta
ctacagaaaggtgccattcagtttaatccaccgttgtcagagaagaagatgaaggctatc
aacagcttaggcgcaggcatcattgaaaagattgccttgcaatttccgtatagattttgg
gacagtaaagtacaaggggctgacttttttggtcacgttcctcccagtgccagcaagcga
gggctttttgccgtgttctatgacatggatccccagaagaagcacagcgtgctgatgtct
gtgattgccggggaggctgtcgcatccgtgaggaccctggatgacaaacaggtgctgcag
cagtgcatggccacgctccgggagctgttcaaggagcaggaggtcccagatcccacaaag
tattttgtcactcggtggagcacagacccatggatccagatggcatacagttttgtgaag
acaggtggaagtggggaggcctacgatatcattgctgaagacattcaaggaaccgtcttt
ttcgctggtgagatggggaaatttgaatcacatgttaaacctcagttttataagaggggg
aaaaaaccgtctctacatagtaaaactgaaatgtttctaaggcgatatgataatgcaaac
ctatttcatcactctaaaagcactgacctcaaaaaaccttataagcacttagatttaatt
gcattttccataggttcaactactgctgaaagtctggatttcagaataaagcagaat