GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:02:30

Sequence gi568815593f:175583234_175785451 : 202218 bp : 47.26% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1844   1976  133  1  1   75   45    83 0.340   3.00
 1.02 Intr +  11010  11148  139  1  1  107   75    39 0.082   4.02
 1.03 Term +  11385  11403   19  0  1  100   54     7 0.073  -3.71
 1.04 PlyA +  12044  12049    6                               1.05

 2.04 PlyA -  12984  12979    6                               1.05
 2.03 Term -  13426  13174  253  0  1   78   49   128 0.662   3.01
 2.02 Intr -  13998  13875  124  1  1   70   55   106 0.830   5.14
 2.01 Init -  23118  23031   88  0  1   73   57    53 0.170   1.50
 2.00 Prom -  25635  25596   40                              -5.76

 3.00 Prom +  30095  30134   40                              -4.96
 3.01 Sngl +  37289  37678  390  1  0   66   33   522 0.415  38.72
 3.02 PlyA +  37965  37970    6                               1.05

 4.11 PlyA -  38615  38610    6                               1.05
 4.10 Term -  40606  40551   56  2  2  121   34    37 0.075  -0.68
 4.09 Intr -  56790  56633  158  2  2  115   33    69 0.481   3.75
 4.08 Intr -  60864  60766   99  2  0   84   30   123 0.840   5.33
 4.07 Intr -  64672  64512  161  1  2  121   74    28 0.340   3.49
 4.06 Intr -  74503  74423   81  1  0  131   51    38 0.607   4.23
 4.05 Intr -  75371  74905  467  0  2   70   39   163 0.240   2.45
 4.04 Intr -  75560  75446  115  2  1   78   18   118 0.159   3.82
 4.03 Intr -  76472  76385   88  1  1   34   62    55 0.001  -2.53
 4.02 Intr -  81302  81069  234  1  0   70   97    72 0.015   3.10
 4.01 Init -  85485  85367  119  0  2   70   73   124 0.751   6.77
 4.00 Prom -  92004  91965   40                              -4.86

 5.00 Prom +  92374  92413   40                              -4.96
 5.01 Init + 100001 101076 1076  1  2   80   90  1324 0.737 125.65
 5.02 Intr + 104911 105022  112  1  1   67   92     9 0.265  -0.42
 5.03 Intr + 112403 112742  340  1  1   90   60   223 0.961  14.75
 5.04 Term + 116969 117084  116  0  2   72   47    98 0.682   2.83
 5.05 PlyA + 117495 117500    6                               1.05

 6.00 Prom + 124019 124058   40                              -3.56
 6.01 Init + 127710 127769   60  2  0   71  111    48 0.899   6.65
 6.02 Intr + 129180 129364  185  2  2   14   44   179 0.565   4.69
 6.03 Term + 136771 137605  835  1  1   54   42   318 0.665  16.26
 6.04 PlyA + 137614 137619    6                               1.05

 7.00 Prom + 137715 137754   40                             -10.55
 7.01 Sngl + 137872 138987 1116  0  0   79   47   295 0.843  21.28
 7.02 PlyA + 139791 139796    6                               1.05

 8.00 Prom + 142555 142594   40                              -4.26
 8.01 Init + 149776 149933  158  0  2   45   73   151 0.406   8.68
 8.02 Intr + 152640 152719   80  0  2   75   52    60 0.113   0.29
 8.03 Intr + 157138 157305  168  2  0   29   62   106 0.181   2.02
 8.04 Intr + 160298 160391   94  0  1   19   72   118 0.202   2.32
 8.05 Intr + 163710 163833  124  0  1  121   81     3 0.250   3.49
 8.06 Intr + 164999 165058   60  1  0  116   24    52 0.039   0.53
 8.07 Intr + 167803 167911  109  0  1   60   55   109 0.492   4.66
 8.08 Intr + 192184 192257   74  2  2  121   21   105 0.017   6.23
 8.09 Term + 200732 200848  117  1  0  114   35    30 0.004  -1.16
 8.10 PlyA + 201835 201840    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 165787 165868   82  0  1   87  107    74 0.845  10.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:175583234_175785451|GENSCAN_predicted_peptide_1|96_aa
MDKQTRPFSAGALIIIEDRHPSSEQMNAMTTGSRICNEENKTGQCMFLLTMLVASDSPIH
FKPSSVRLFPQLHTKAVLVKVTNDSTSTDPRAPSQI

>gi568815593f:175583234_175785451|GENSCAN_predicted_CDS_1|291_bp
atggacaaacagacaagacctttctctgctggagccctcatcataatagaagacagacac
ccatcaagtgaacagatgaatgcaatgacaactggcagcaggatctgcaatgaagaaaat
aagactggacaatgcatgttcctgctgaccatgcttgtggcttccgattctcccattcac
tttaaacccagttcagtcaggcttttcccccaactccacaccaaagctgttcttgtcaaa
gtcaccaatgactccacatcaacagatcccagagctcccagccagatttga

>gi568815593f:175583234_175785451|GENSCAN_predicted_peptide_2|154_aa
MQPEATRFLTSSIASVDNIIIVIPEIGVRERKAHVGIPSVPGPGGAGTAEYFTDLTIEEP
ESQVLSKTLRRGNGTLALLVTAFWWLSTTYTRGSQNKTPRPAAAAAPENLLEKQILGPTP
DLLTQNLRDGAQISVFHKPPGGPDAGSTQDCSFK

>gi568815593f:175583234_175785451|GENSCAN_predicted_CDS_2|465_bp
atgcagccagaggccacaagattcctaacctcctcaattgcttctgtagataacatcatt
attgtaatacctgagattggtgttcgagaaagaaaggctcatgtgggaatccccagcgtc
ccaggccccgggggagcaggcactgctgagtacttcaccgatttgacaattgaggaacct
gagtcccaggtcttgtccaagacactgagaaggggaaatgggactctggctctcctggtc
acagccttttggtggctttccacgacctacaccagggggtctcaaaataagacccccaga
ccagctgcagcagcagcacctgagaacctgttagaaaagcaaattcttggccccacccca
gacctactgacccagaacctcagagatggtgcccagatatctgtatttcacaagcccccg
ggtggtcctgatgctggctccacacaggattgttcatttaagtga

>gi568815593f:175583234_175785451|GENSCAN_predicted_peptide_3|129_aa
MMIMVMVMVVTVMVMVRMMMMMVMVVMVRMTMVMVRMMIAMVNDDNYYCGDYNYGDDGED
DDGEDDDGKDDDGDGDNVGNGDDGDGDDKDNDGGTDYGDDDDAEDEDDDDDSDCYVLNVF
VLAKIHVET

>gi568815593f:175583234_175785451|GENSCAN_predicted_CDS_3|390_bp
atgatgatcatggtgatggtgatggtggtgacagtgatggtgatggtgagaatgatgatg
atgatggtgatggtggtgatggtgaggatgacaatggtgatggtgaggatgatgatagcg
atggtgaatgatgataattattactgtggtgattataattatggtgatgatggtgaggat
gatgatggtgaggatgatgatggtaaggatgatgatggtgatggtgataatgttggtaat
ggtgatgatggtgatggtgatgataaggataatgatggtggtactgattatggtgatgat
gatgatgctgaggatgaggatgatgatgatgatagtgattgctatgttttaaatgttttt
gtccttgccaaaattcatgttgaaacttaa

>gi568815593f:175583234_175785451|GENSCAN_predicted_peptide_4|525_aa
MAGLLLTDQPGPFLLAGPSPRLSSQSPGPDEERHPSQQLQSSLIILNALNTPGHFAALFP
CARPFYIWNTQTLCVYLLHSHAPVCFPHYAGILSGVSIAVSSVHCPGLSTSRAPGSICHI
LGPARYNQKHPGGGQTWFQSLNRHFLPANPRPDVPSKDSHPLSAACCGSGHRSSGSGRQP
SGMKAESCSMLRQTHRREKMPPPRPGDKTGTVSAQVHFPNPPFAGKGDIKPTRVPSTAVH
RGCIPSSQRPLGEGTTPAVTDKETEARRPGGGTCPRSGTARERWGRGSNPGSGPRRPPGI
PSSPSGGSASPRRVPKPAWDPTPSRGPAGRRRPRYLVLLPRIVSPPLTGQPPPVQILAEW
PQLEDLPRVRQPYCDHEGKTMRTEGKWTQNPDIVRLLEKPWKHLLLNVFACELMKHPMVK
LLDIDNELCKEYLFLHPLEDDDDGDGGGYQLHSIYNACWLNTTGSQGTRELFDVAGFCSG
ERVWRDRWTLPIMAGKPYIALQESDGRHEEIESSEFEAVTPQKQA

>gi568815593f:175583234_175785451|GENSCAN_predicted_CDS_4|1578_bp
atggctggactcctcctcactgaccagcctgggcccttcctcctagccggcccctcaccg
cgactctcatctcagtctccaggacctgatgaagaaaggcatccttcacagcagctgcag
tcaagcctaatcatcctgaatgccctgaacacccctggacattttgcagctctgtttcct
tgtgcacgccctttctacatctggaatacccagacgctctgtgtctatctgctgcattcc
catgcacctgtctgctttccacactatgctggaatcttatcaggtgtatccattgctgta
tcttcagtgcactgcccaggactgagcacaagcagggccccaggaagcatttgtcatatt
ttggggccagcacgatacaaccagaagcaccctggaggcgggcagacctggttccagtct
ctgaacaggcacttcctaccggcaaatccacgtccagatgtccccagcaaggactcccac
ccgctgagcgctgcctgttgtggctccggtcatcggtcatccggcagcgggcggcagccc
agcgggatgaaggcagaaagttgctccatgctccgacagacacatcgccgcgagaaaatg
ccaccacccagacccggagacaaaacggggactgtttcggcgcaagtgcactttccaaat
ccacccttcgcgggcaaaggggatataaagccgacccgcgtcccgagcactgctgtgcac
cggggctgcatcccgagctctcaacgcccccttggggaaggcacgacccccgcggtcaca
gacaaggaaactgaggctcgcaggccaggcggaggcacctgcccaaggtcaggcacagcc
agggagcggtggggccgaggctcgaacccgggttcggggccacgacggccgccggggatc
ccgagcagcccctcgggcggctccgccagcccacgccgggtccccaagcccgcctgggac
cccaccccgagccgaggccccgcggggaggcggcggccgcgttacctggtgctgctgccg
cggattgtgagcccgcccttgaccgggcaaccgccacctgtgcagatattggctgagtgg
ccacagctggaggacctgccccgggtgaggcagccatattgtgaccatgagggaaagacc
atgagaactgaagggaaatggactcagaacccagatattgtaaggctcctggagaaaccc
tggaaacatctacttctcaacgttttcgcttgtgagctaatgaaacaccctatggttaag
ctacttgatattgacaatgaactatgtaaagagtacctttttctccaccctctagaggac
gatgatgatggtgatggtggtggctaccagttacacagcatttacaatgcctgttggctg
aacacaacaggaagccaggggacgagggagctctttgatgtagcaggcttttgcagtgga
gagagggtctggagggacagatggacattacccatcatggcagggaagccctacatcgct
ctccaggagagtgatggcagacatgaggaaatagaatcttctgaatttgaagctgttacc
ccccaaaaacaggcttga

>gi568815593f:175583234_175785451|GENSCAN_predicted_peptide_5|547_aa
MAPNGTASSFCLDSTACKITITVVLAVLILITVAGNVVVCLAVGLNRRLRNLTNCFIVSL
AITDLLLGLLVLPFSAIYQLSCKWSFGKVFCNIYTSLDVMLCTASILNLFMISLDRYCAV
MDPLRYPVLVTPVRVAISLVLIWVISITLSFLSIHLGWNSRNETSKGNHTTSKCKVQVNE
VYGLVDGLVTFYLPLLIMCITYYRIFKVARDQAKRINHISSWKAATIREHKATVTLAAVM
GAFIICWFPYFTAFVYRGLRGDDAINEVLEAIVLWLGYANSALNPILYAALNRDFRTGYQ
QLFCCRLANRNSHKTSLRSNASQLSRTQSREPRQQEEKPLKLQVWSGTEVTAPQGATDRK
TLAIARRPAWVTHATLEPQLKFHNVIETAKSLLPRKTGCGGLPAASDIGRLLVPRTHISK
RALEVLRGQQTKAEGVDLKEKGPPAFKDGPGNREEGRGVFEGAEEEPSERCPGPRPEPVR
GYRASKGLKPKKLARRFRGYTQDTALNSPGFLPTRLLQAGGEKVDGEIKPESGYRLPETA
GEKLDCL

>gi568815593f:175583234_175785451|GENSCAN_predicted_CDS_5|1644_bp
atggcacccaatggcacagcctcttccttttgcctggactctaccgcatgcaagatcacc
atcaccgtggtccttgcggtcctcatcctcatcaccgttgctggcaatgtggtcgtctgt
ctggccgtgggcttgaaccgccggctccgcaacctgaccaattgtttcatcgtgtccttg
gctatcactgacctgctcctcggcctcctggtgctgcccttctctgccatctaccagctg
tcctgcaagtggagctttggcaaggtcttctgcaatatctacaccagcctggatgtgatg
ctctgcacagcctccattcttaacctcttcatgatcagcctcgaccggtactgcgctgtc
atggacccactgcggtaccctgtgctggtcaccccagttcgggtcgccatctctctggtc
ttaatttgggtcatctccattaccctgtcctttctgtctatccacctggggtggaacagc
aggaacgagaccagcaagggcaatcataccacctctaagtgcaaagtccaggtcaatgaa
gtgtacgggctggtggatgggctggtcaccttctacctcccgctactgatcatgtgcatc
acctactaccgcatcttcaaggtcgcccgggatcaggccaagaggatcaatcacattagc
tcctggaaggcagccaccatcagggagcacaaagccacagtgacactggccgccgtcatg
ggggccttcatcatctgctggtttccctacttcaccgcgtttgtgtaccgtgggctgaga
ggggatgatgccatcaatgaggtgttagaagccatcgttctgtggctgggctatgccaac
tcagccctgaaccccatcctgtatgctgcgctgaacagagacttccgcaccgggtaccaa
cagctcttctgctgcaggctggccaaccgcaactcccacaaaacttctctgaggtccaac
gcctctcagctgtccaggacccaaagccgagaacccaggcaacaggaagagaaacccctg
aagctccaggtgtggagtgggacagaagtcacggccccccagggagccacagacagaaag
acactcgcaattgcacggaggcccgcctgggtaacccatgctactctcgagcctcagctc
aaattccataatgtcatcgaaactgcaaagtcccttttgccgcgtaagacaggctgtggg
ggcctccctgctgccagcgacatcggaaggttattagttcctcgaacccacatcagcaag
agggccctagaagtgctgcgggggcagcaaactaaggcagagggtgtagacctcaaggag
aaggggccaccagcatttaaggatgggccagggaacagggaagaggggagaggagtcttc
gaaggggctgaggaggaaccatctgagaggtgcccaggtccaaggcctgagccagtcaga
ggctacagagccagtaaaggtctcaaaccaaagaaactggcacggcgattcaggggctac
acccaagacacagcgctcaacagcccagggttcctgcccacaaggctcttacaggctggc
ggtgagaaggtagatggtgaaataaagccagaaagtgggtaccggctaccggagacagcc
ggggagaagctggactgcctctga

>gi568815593f:175583234_175785451|GENSCAN_predicted_peptide_6|359_aa
MREGLADQKDLETQVVGRSLQSTRKFPVLGVAIKTTVEGEFIIRIVQMREWSSESSGGSP
HVTQAGKHRWGHTFATGIPSIQRQEITKIRAELKEIETQKTLQKINESRSWFFERINKID
KPLARLIKKKREKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLD
TYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSAGPDGFTAEFYQRYKEELVPFLLK
LFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDTKILNKILANRIQQH
IKKLIHHDQVGFIPGMQGWFNIHKSINVIQHINRTKDKNHMIISIDAEKALTKFNNASC

>gi568815593f:175583234_175785451|GENSCAN_predicted_CDS_6|1080_bp
atgagggaagggctggctgatcagaaggacctggagacccaggtagttgggagaagcttg
caaagcacccggaaattccccgtgcttggtgtggccatcaagactactgtcgagggagag
ttcatcatccgcattgtccagatgagggaatggagctcagagagttcaggtggctctccc
catgtcacacaagcaggaaagcatcgctggggacacacatttgccaccggaattccaagc
atccaaaggcaagaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaa
acccttcaaaaaattaatgaatccaggagctggttttttgaaaggatcaacaaaattgat
aaaccgctagcaagactaataaagaaaaaaagagagaagaatcaaatagacgcaataaaa
aatgataaaggggatatcaccaccgatcccacagaaatacaaactaccatcagagaatac
tacaaacacctctatgcaaataaactagaaaatctagaagaaatggataaattcctcgac
acatacactctcccaagactaaaccaggaagaagttgaatctctgaatagaccaataaca
ggctctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtgcaggaccagat
ggattcacagccgaattctaccagaggtacaaggaggaactggtaccattccttctgaaa
ctattccaatcaatagaaaaagagggaatcctccctaactcattttatgaggccagcatc
atcctgataccaaagccgggcagagacacaaccaaaaaagagaattttagaccaatatcc
ttgatgaacattgacacaaaaatcctcaataaaatactggcaaaccgaatccagcagcac
atcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttc
aatatacacaaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccac
atgattatctcaatagatgcagaaaaggccttgacaaaattcaacaacgcttcatgctaa

>gi568815593f:175583234_175785451|GENSCAN_predicted_peptide_7|371_aa
MIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNMPCSWVGRINIMKMAILPKVIY
RFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHITKSILSQKNKAGGITLPDFKLYYKATV
TKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAI
CRKLKLDPFLTPYTKINSRWIKDLNVGPKTIKTLEENLGFTIQDIGMGKDFMSKTPKAMA
TKAKIDKWDLIQLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIYNELKQIYKK
KTTPSKSGRRT

>gi568815593f:175583234_175785451|GENSCAN_predicted_CDS_7|1116_bp
atgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatac
accaacaacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggag
aactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaatatgcca
tgctcatgggtaggaagaatcaatatcatgaaaatggccatactgcccaaggtaatttac
agattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagagcccacatcaccaagtcaatcctaagccaa
aagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaacagag
ccctcagaaataacgccgcatatctacaactatctgatctttgacaaacctgaaaaaaac
aagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccata
tgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaagatgg
attaaagacttaaacgttggacctaaaaccataaaaaccctagaagaaaacctaggcttt
accattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggca
acaaaagccaaaattgacaaatgggatctaattcaactaaagagcttctgcacagcaaaa
gaaactaccatcagagtgaacaggcaacctacaaaatgggagaaaattttcgcaacctac
tcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaa
aaaacaaccccatcaaaaagtgggcgaaggacatga

>gi568815593f:175583234_175785451|GENSCAN_predicted_peptide_8|327_aa
MERPEKHVIPPQRDWTEKGAQKVLKGHVPNFSGEMALELRGVGVVPVEEEGGGFSPSFKA
VLNATFLRKPSLARILPFPGLMYYQTLGWLCGHHANILEGIQRRKSVVKIKASNLGHQTP
EAASIPNYFWGLQAQVFELAYHTCGLYSCDGGYKDLYGEDGWCVQEGNKAQILLRVEVCA
VKRLHFPSFPSSKACPHDCILANDVQMEGRWDPCDIKVADTTMEEGLELWEVSIAIRSIV
QMFQNIKLMLRDMENLLKVTGKPEASLKLSRKQPMASDNDPKITTNVKKVFNGWVMPTHI
GEAICFTWSTNSNANHFQKHLHRHTQK

>gi568815593f:175583234_175785451|GENSCAN_predicted_CDS_8|984_bp
atggagagaccagagaaacatgtgattccaccccagcgggactggacagaaaagggtgct
cagaaggtgttgaaggggcacgtgcccaacttctcaggggagatggcattggagctgaga
ggtgtgggagttgtccccgtggaggaggaaggtggaggcttctccccatccttcaaggct
gtgctcaacgccaccttcctaaggaagccatcgctggctcggattctcccgtttccagga
cttatgtactaccagacactgggatggctctgtggtcatcatgcaaacatcctagaagga
atccaaaggaggaaatcagtggtgaaaatcaaggccagcaacctgggacaccagactcca
gaggctgcctccatccccaactacttctggggtctccaagcacaagtattcgagttggct
tatcacacgtgtggcctctacagctgtgatggtggctacaaagacctctatggggaagac
ggctggtgtgtccaggaagggaacaaagcccagattttattgagggtggaagtgtgcgca
gttaaaagactacatttcccatccttccctagcagcaaggcgtgcccacatgactgtatc
ctggccaatgatgtacaaatggaaggaaggtgggatccatgtgacatcaaggtggctgat
acaaccatggaagagggtctagagctctgggaggtgagcattgccattcgctccattgta
cagatgttccaaaatataaaactgatgctcagagacatggagaacctgctcaaggtcaca
ggaaagccagaggcctccctgaaactttcaaggaagcagccgatggcctctgacaatgat
ccaaaaattacgaccaacgtcaaaaaagtcttcaatggatgggtgatgcccacacatatt
ggggaggccatctgctttacttggtcaaccaattcaaatgctaatcacttccagaaacat
cttcacagacacacccagaaataa