GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:05:16

Sequence gi568815593r:149274372_149477026 : 202655 bp : 48.18% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    921    916    6                              -1.75
 1.01 Sngl -   1137    925  213  0  0   56   54   229 0.756  11.48
 1.00 Prom -   6194   6155   40                              -4.26

 2.00 Prom +  12922  12961   40                              -3.66
 2.01 Init +  14447  14504   58  1  1   69   63    77 0.661   4.77
 2.02 Intr +  25138  25266  129  2  0  129   71   232 0.999  26.27
 2.03 Intr +  25900  25983   84  2  0  114  111   105 0.542  15.19
 2.04 Intr +  26762  26859   98  0  2   72   92    94 0.903   7.93
 2.05 Intr +  28047  28155  109  2  1  125   98   128 0.993  17.36
 2.06 Intr +  31935  32033   99  1  0   48   95   151 0.998  11.88
 2.07 Intr +  33031  33242  212  2  2   48  105   346 0.986  30.93
 2.08 Intr +  35585  35764  180  1  0   76  100   238 0.999  23.86
 2.09 Intr +  37741  37833   93  0  0  108   71    88 0.968   9.26
 2.10 Intr +  39197  39283   87  1  0   81   56    68 0.820   3.07
 2.11 Intr +  41450  41543   94  1  1   94   70    71 0.966   5.44
 2.12 Intr +  41780  41932  153  0  0  111   52   238 0.882  22.54
 2.13 Intr +  43358  43569  212  0  2   83   78   359 0.708  33.03
 2.14 Intr +  45211  45356  146  0  2  102   95   236 0.999  24.78
 2.15 Intr +  46020  46092   73  0  1   97   92    44 0.996   5.11
 2.16 Intr +  48235  48346  112  0  1  116   81    97 0.998  11.75
 2.17 Intr +  55295  55459  165  0  0  111   82   225 0.957  24.13
 2.18 Intr +  58324  58502  179  2  2   63   84   291 0.991  25.84
 2.19 Term +  59153  59269  117  1  0   56   31    96 0.705  -0.76
 2.20 PlyA +  59699  59704    6                               1.05

 3.00 Prom +  60625  60664   40                              -3.06
 3.01 Init +  71169  71245   77  2  2  108   82   142 0.996  14.17
 3.02 Intr +  73901  74054  154  2  1  115   79   150 0.982  16.87
 3.03 Intr +  75283  75364   82  0  1   77   77    44 0.995   1.41
 3.04 Term +  76547  76911  365  0  2   76   49   307 0.991  20.33
 3.05 PlyA +  78268  78273    6                               1.05

 4.00 Prom +  83063  83102   40                              -2.86
 4.01 Init +  83698  83785   88  0  1  112   58   277 0.959  25.90
 4.02 Intr +  88266  88472  207  1  0   52   92   258 0.504  21.65
 4.03 Intr +  89665  89839  175  2  1  104   75   248 0.999  24.10
 4.04 Intr +  91571  91782  212  2  2   79  115   315 0.998  31.86
 4.05 Intr +  92989  93129  141  2  0   66  109    59 0.970   6.12
 4.06 Term +  93622  94283  662  2  2   97   55   986 0.742  90.27
 4.07 PlyA +  94726  94731    6                               1.05

 5.04 PlyA -  95999  95994    6                               1.05
 5.03 Term - 100229  99998  232  1  1  110   41   352 0.999  28.65
 5.02 Intr - 102543 102365  179  0  2   83   96   311 0.628  30.12
 5.01 Init - 104854 104834   21  1  0   81   92    24 0.401   0.25
 5.00 Prom - 109904 109865   40                              -6.76

 6.00 Prom + 114993 115032   40                              -5.66
 6.01 Init + 117322 117396   75  0  0   87   70    53 0.546   4.56
 6.02 Intr + 117599 117716  118  1  1  102   90    25 0.783   4.14
 6.03 Intr + 130716 130763   48  1  0   81   64    47 0.062   0.25
 6.04 Intr + 132670 132707   38  2  2   71  121    38 0.097   3.38
 6.05 Intr + 146110 146232  123  0  0  105   37    91 0.714   6.48
 6.06 Term + 146310 146459  150  2  0  103   53   123 0.476   8.21
 6.07 PlyA + 151263 151268    6                               1.05

 7.04 PlyA - 151862 151857    6                               1.05
 7.03 Term - 157133 157084   50  0  2   84   54    62 0.133  -0.13
 7.02 Intr - 172985 172851  135  0  0  119   60    13 0.027   2.14
 7.01 Intr - 197723 197551  173  1  2   66   78   102 0.040   6.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 118899 118942   44  1  2  117   49    27 0.823  -0.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:149274372_149477026|GENSCAN_predicted_peptide_1|70_aa
MKKEERRKKEEEEEEEEEEEEETPEIFLWMHREEATKGHGKKCPYKPGREVPPDTNPDCT
LILDFQHLEL

>gi568815593r:149274372_149477026|GENSCAN_predicted_CDS_1|213_bp
atgaagaaagaggaaagaaggaagaaagaagaagaagaagaggaagaggaagaagaagaa
gaagaaacaccagagatctttctctggatgcacagagaagaggccacgaagggacatggc
aaaaagtgtccctacaagccaggaagagaggtcccacccgacactaaccctgactgcacc
ttgatcttagacttccagcatctggaactgtga

>gi568815593r:149274372_149477026|GENSCAN_predicted_peptide_2|799_aa
MPQVTALLVEDKNLGRADAMLEQLLPELTGLLSLLDHEYLSDTTLEKKMAVASILQSLQP
LPAKEVSYLYVNTADLHSGPSFVESLFEEFDCDLSDLRDMPEDDGEPSKGASPELAKSPR
LRNAADLPPPLPNKPPPEDYYEEALPLGPGKSPEYISSHNGCSPSHSIVDGYYEDADSSY
PATRVNGELKSSYNDSDAMSSSYESYDEEEEEGKSPQPRHQWPSEEASMHLVRECRICAF
LLRKKRFGQWAKQLTVIREDQLLCYKSSKDRQPHLRLALDTCSIIYVPKDSRHKRHELRF
TQGATEVLVLALQSREQAEEWLKVIREVSKPVGGAEGVEVPRSPVLLCKLDLDKARILST
CLTHIRGTPGTVLATEMQSKHKQRLSQEKQTSDSDSVGVGDNCSTLGRRETCDHGKGKKS
SLAELKGSMSRAAGRKITRIIGFSKKKTLADDLQTSSTEEEVPCCGYLNVLVNQGWKERW
CRLKCNTLYFHKDHMDLRTHVNAIALQGCEVAPGFGPRHPFAFRILRNRQEVAILEASCS
EDMGRWLGLLLVEMGSRVTPEALHYDYVDVETLTSIVSAGRNSFLYARSCQNQWPEPRVY
DDVPYEKMQDEEPERPTGAQVKRHASSCSEKSHRVDPQVKVKRHASSANQYKYGKNRAEE
DARRYLVEKEKLEKEKETIRTELIALRQEKRELKEAIRSSPGAKLKALEEAVATLEAQCR
AKEERRIDLELKLVAVKERLQQSLAGGPALGLSVSSKPKSGQLSEEDTLTSNGALSERTS
LTSSTPALLNPNTTDILDQ

>gi568815593r:149274372_149477026|GENSCAN_predicted_CDS_2|2400_bp
atgccccaagtgacagccctcctggtggaggacaagaacctgggcagagctgatgcgatg
ctggagcagctgctcccagagctcaccgggctgctcagcctcctggaccacgagtacctc
agcgataccaccctggaaaagaagatggccgtggcctccatcctgcagagcctgcagccc
cttccagcaaaggaggtctcctacctgtatgtgaacacagcagacctccactcggggccc
agcttcgtggaatccctctttgaagaatttgactgtgacctgagtgaccttcgggacatg
ccagaggatgatggggagcccagcaaaggagccagccctgagctagccaagagcccacgc
ctgagaaacgcggccgacctgcctccaccgctccccaacaagcctccccctgaggactac
tatgaagaggcccttcctctgggacccggcaagtcgcctgagtacatcagctcccacaat
ggctgcagcccctcacactcgattgtggatggctactatgaggacgcagacagcagctac
cctgcaaccagggtgaacggcgagcttaagagctcctataatgactctgacgcaatgagc
agctcctatgagtcctacgatgaagaggaggaggaagggaagagcccgcagccccgacac
cagtggccctcagaggaggcctccatgcacctggtgagggaatgcaggatatgtgccttc
ctgctgcggaaaaagcgtttcgggcagtgggccaagcagctgacggtcatcagggaggac
cagctcctgtgttacaaaagctccaaggatcggcagccacatctgaggttggcactggat
acctgcagcatcatctacgtgcccaaggacagccggcacaagaggcacgagctgcgtttc
acccagggggctaccgaggtcttggtgctggcactgcagagccgagagcaggccgaggag
tggctgaaggtcatccgagaagtgagcaagccagttgggggagctgagggagtggaggtc
cccagatccccagtcctcctgtgcaagttggacctggacaaggccaggatcctgagcacc
tgcttgacacatatccggggcaccccaggaactgtgctagccactgaaatgcagtccaaa
cacaaacagaggctgtcccaagagaagcagacctcagattctgacagcgtgggtgtgggt
gacaactgttctacccttggccgccgggagacctgtgatcacggcaaagggaagaagagc
agcctggcagaactgaagggctcaatgagcagggctgcgggccgcaagatcacccgtatc
attggcttctccaagaagaagacactggccgatgacctgcagacgtcctccaccgaggag
gaggttccctgctgtggctacctgaacgtgctggtgaaccagggctggaaggaacgctgg
tgccgcctgaagtgcaacactctgtatttccacaaggatcacatggacctgcgaacccat
gtgaacgccatcgccctgcaaggctgtgaggtggccccgggctttgggccccgacaccca
tttgccttcaggatcctgcgcaaccggcaggaggtggccatcttggaggcaagctgttca
gaggacatgggtcgctggctcgggctgctgctggtggagatgggctccagagtcactccg
gaggcgctgcactatgactacgtggatgtggagaccttaaccagcatcgtcagtgctggg
cgcaactccttcctatatgcaagatcctgccagaatcagtggcctgagccccgagtctat
gatgatgttccttatgaaaagatgcaggacgaggagcccgagcgccccacaggggcccag
gtgaagcgtcacgcctcctcctgcagtgagaagtcccatcgtgtggacccgcaggtcaaa
gtcaaacgccacgcctccagtgccaatcaatacaagtatggcaagaaccgagccgaggag
gatgcccggaggtacttggtagaaaaagagaagctggagaaagagaaagagacgattcgg
acagagctgatagcactgagacaggagaagagggaactgaaggaagccattcggagcagc
ccaggagcaaaattaaaggctctggaagaagccgtggccaccctggaagctcagtgtcgg
gcaaaggaggagcgccggattgacctggagctgaagctggtggctgtgaaggagcgcttg
cagcagtccctggcaggagggccagccctggggctctccgtgagcagcaagcccaagagt
gggcaactctctgaggaagatacgctcacctccaatggtgctctctcagagagaacttct
ctgacctcatctacaccagcgcttctcaaccccaacactactgacattttggaccagtaa

>gi568815593r:149274372_149477026|GENSCAN_predicted_peptide_3|225_aa
MAVRSLWAGRLRVQRLLAWSAAWESKGWPLPFSTATQRTAGEDCRSEDPPDELGPPLAER
ALRVKAVKLEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADIL
EKTTECISEESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHEL
ICHVPAGVGVQPGTVALVRQDGYKLHGRTIRLARVEVAVESQRRL

>gi568815593r:149274372_149477026|GENSCAN_predicted_CDS_3|678_bp
atggccgtacggtcgctgtgggcgggccggctgcgggtgcagcgcctactggcctggagt
gccgcgtgggagagcaagggatggccgcttccattcagcactgccacccagagaactgct
ggtgaggactgccgttctgaggaccctcctgatgagcttgggccccctcttgctgaacga
gccttaagggtaaaagctgttaaactggagaaagaagtccaagatttaacagtgagatac
cagagagctatagctgattgtgaaaacataaggaggcgaacccagagatgtgtggaagac
gccaagatatttggaatccagagtttctgtaaggacttggtggaggtggctgacattttg
gagaagactacagagtgcatttctgaagaatcggagcctgaggaccaaaagctcactctg
gagaaggtcttccgagggttgttgcttttagaagcaaagctgaaaagtgtgtttgccaag
catggcctggagaaactgacacccattggtgacaaatatgacccccatgagcatgaactc
atctgtcatgtgccagctggtgttggggtgcagcctggcaccgtggcattagtaagacaa
gatggctacaaacttcatggccgcaccattaggcttgcccgagtggaagtggcagtggag
tctcagagaagactgtga

>gi568815593r:149274372_149477026|GENSCAN_predicted_peptide_4|494_aa
MARAAPLLAALTALLAAAAAGGDAPPGKIAVVGAGIGGSAVAHFLQQHFGPRVQIDVYEK
GTVGGRLATISVNKQHYESGAASFHSLSLHMQDFVKLLGLRHRREVVGRSAIFGGEHFML
EETDWYLLNLFRLWWHYGISFLRLQMWVEEVMEKFMRIYKYQAHGYAFSGVEELLYSLGE
STFVNMTQHSVAESLLQVGVTQRFIDDVVSAVLRASYGQSAAMPAFAGAMSLAGAQGSLW
SVEGGNKLVCSGLLKLTKANVIHATVTSVTLHSTEGKALYQVAYENEVGNSSDFYDIVVI
ATPLHLDNSSSNLTFAGFHPPIDDVQGSFQPTVVSLVHGYLNSSYFGFPDPKLFPFANIL
TTDFPSFFCTLDNICPVNISASFRRKQPQEAAVWRVQSPKPLFRTQLKTLFRSYYSVQTA
EWQAHPLYGSRPTLPRFALHDQLFYLNALEWAASSVEVMAVAAKNVALLAYNRWYQDLDK
IDQKDLMHKVKTEL

>gi568815593r:149274372_149477026|GENSCAN_predicted_CDS_4|1485_bp
atggcccgcgcagccccgctgctcgccgcgttgaccgcgctcctcgccgccgccgctgct
ggcggagatgccccgccgggcaaaatcgcggtggttggggctgggattgggggctctgct
gtggcccattttctccagcagcactttggacctcgggtgcagatcgacgtgtacgagaag
ggaaccgtgggtggccgcttggccaccatctcagtcaacaagcagcactatgagagcggg
gctgcctccttccactccctgagcctgcacatgcaggacttcgtcaagctgctggggctg
aggcaccggcgcgaggtggtgggcaggagcgccatcttcggcggggagcacttcatgctg
gaggagactgactggtacctgctgaacctcttccgcctctggtggcactatggcatcagc
ttcctgaggctgcagatgtgggtggaggaggtcatggagaagttcatgaggatctataag
taccaggcccacggctatgccttctcgggtgtggaggagctgctctactcactgggggag
tccacctttgttaacatgacccagcactctgtggctgagtccctgctgcaggtgggcgtc
acgcagcgctttattgatgatgtcgtttctgctgtcctgcgggccagctatggccagtca
gcagcgatgcccgcctttgcaggagccatgtcactagccggggcccaaggcagcctgtgg
tctgtggaaggaggcaataagctggtttgttccggtttgctgaagctcaccaaggccaat
gtgatccatgccacagtgacctctgtgaccctgcacagcacagaggggaaagccctgtac
caggtggcgtatgagaatgaggtaggcaacagctctgacttctatgacatcgtggtcatc
gccacccccctgcacctggacaacagcagcagcaacttaacctttgcaggcttccacccg
cccattgatgacgtgcagggctctttccagcccaccgtcgtctccttggtccacggctac
ctcaactcgtcctacttcggtttcccagaccctaagcttttcccctttgccaacatcctt
accacagatttccccagcttcttctgcactctggacaacatctgccctgtcaacatctct
gccagcttccggcgaaagcagccccaggaggcagctgtttggcgagtccagtcccccaag
cccctctttcggacccagctaaagaccctgttccgttcctattactcagtgcagacagct
gagtggcaggcccatcccctctatggctcccgccccacgctcccgaggtttgcactccat
gaccagctcttctacctcaatgccctggagtgggcggccagctccgtggaggtgatggcc
gtggctgccaagaatgtggccttgctggcttacaaccgctggtaccaggacctagacaag
attgatcaaaaagatttgatgcacaaggtcaagactgaactgtga

>gi568815593r:149274372_149477026|GENSCAN_predicted_peptide_5|143_aa
MDWPHNLVPLDLVSRMKPYARMEEYERNIEEMVAQLRNSSELAQRKCEVNLQLWMSNKRS
LSPWGYSINHDPSRIPVDLPEARCLCLGCVNPFTMQEDRSMVSVPVFSQVPVRRRLCPPP
PRTGPCRQRAVMETIAVGCTCIF

>gi568815593r:149274372_149477026|GENSCAN_predicted_CDS_5|432_bp
atggactggcctcacaacctggtgccactggacctggtgtcacggatgaaaccgtatgcc
cgcatggaggagtatgagaggaacatcgaggagatggtggcccagctgaggaacagctca
gagctggcccagagaaagtgtgaggtcaacttgcagctgtggatgtccaacaagaggagc
ctgtctccctggggctacagcatcaaccacgaccccagccgtatccccgtggacctgccg
gaggcacggtgcctgtgtctgggctgtgtgaaccccttcaccatgcaggaggaccgcagc
atggtgagcgtgccggtgttcagccaggttcctgtgcgccgccgcctctgcccgccaccg
ccccgcacagggccttgccgccagcgcgcagtcatggagaccatcgctgtgggctgcacc
tgcatcttctga

>gi568815593r:149274372_149477026|GENSCAN_predicted_peptide_6|183_aa
MAGPSLSCQWRRVIELCAMEDGDWPLLIPLLSLPGCLEKLKISVTQASCTLQVGVHNGYN
LHEGGLHGPPRPALMAMLKAGPKEPHLDQTPGKTCGGNPTALEPKESNGCNKCTGLSALR
QGNRGQRGPSRKSWMWPIPSPSCFLEMRKSRKGHRGFRNDRGDDSFDVWSSSRPLPTPKR
KLD

>gi568815593r:149274372_149477026|GENSCAN_predicted_CDS_6|552_bp
atggcaggcccgtcactgagctgtcagtggaggagggtgattgaactgtgtgcaatggag
gacggcgactggccgcttctcatccccttactctctctcccaggctgcctggagaaactc
aaaatttctgtgacacaggcctcttgtacattgcaagtgggagtacacaatggttacaac
ctccatgagggaggactgcacgggccacctcgcccagccctcatggcaatgctgaaggca
ggccccaaggagccacacctggaccagaccccaggaaagacatgtggtggaaaccctacg
gccctggagcccaaggagagcaacggctgtaacaagtgcacaggtttgagtgcgctgaga
caggggaaccgtgggcaaagaggtccctccagaaagagctggatgtggcccattcccagc
ccctcgtgtttcttggaaatgagaaagtccaggaaagggcacaggggctttcgcaacgac
cgtggcgatgatagctttgacgtgtggtcatccagccggccactgcccacacccaagaga
aagctggattga

>gi568815593r:149274372_149477026|GENSCAN_predicted_peptide_7|119_aa
XLPPVNGHHPGRHPREGAMLQVKTALSCQSVVPGTCRSPSSPSPTVIGSLLGSWVREGGG
EHNAQACLIGVMVMNLDLFMVQFGPLRDSPGTFANLSGGAVGRDLRKEGFEDEPACGSK

>gi568815593r:149274372_149477026|GENSCAN_predicted_CDS_7|360_bp
nnccttccccctgtgaatggacatcacccgggccggcacccccgagaaggtgctatgctg
caggtaaagactgctttgtcctgccagagcgtggttcctggaacttgtcgcagtcccagt
agtccttcccccacagtgatcggctccctcttgggttcctgggtgcgggaaggagggggt
gagcacaatgctcaggcctgtctaattggagtcatggtgatgaatctggatttgttcatg
gttcagtttgggccattaagagacagccctgggacttttgctaacttaagtggtggggcg
gtggggagggatctacgtaaggagggctttgaggatgaaccagcctgtggaagtaaatga