GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:05:55

Sequence gi568815593f:148726832_148928070 : 201239 bp : 40.86% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   1594   1435  160  0  1   72   79   104 0.158   6.97
 1.01 Init -   7107   6980  128  0  2   82   80    60 0.215   4.28
 1.00 Prom -   7888   7849   40                              -4.85

 2.00 Prom +  16807  16846   40                              -3.95
 2.01 Init +  46188  46556  369  2  0   46   85   199 0.921  12.44
 2.02 Intr +  51325  51468  144  0  0   91   65    37 0.018   1.26
 2.03 Intr +  67778  67882  105  1  0   18   61   136 0.029   3.39
 2.04 Intr +  78936  79098  163  2  1   79   62    80 0.043   3.13
 2.05 Term +  81156  81265  110  1  2  104   48    76 0.327   2.89
 2.06 PlyA +  81827  81832    6                               1.05

 3.02 PlyA -  82357  82352    6                               1.05
 3.01 Sngl -  84745  84599  147  1  0   99   45   170 0.382   7.60
 3.00 Prom -  86995  86956   40                              -5.35

 4.00 Prom +  93435  93474   40                              -5.55
 4.01 Init +  99104  99527  424  1  1   69   95   205 0.795  15.86
 4.02 Intr +  99777 101174 1398  1  0   37   79  1431 0.907 125.33
 4.03 Term + 105002 105132  131  0  2   71   48    86 0.564   0.26
 4.04 PlyA + 105885 105890    6                               1.05

 5.00 Prom + 111441 111480   40                              -3.55
 5.01 Init + 121641 121732   92  2  2   65  100    61 0.364   5.01
 5.02 Term + 131904 132084  181  0  1  104   48   184 0.846  12.10
 5.03 PlyA + 132948 132953    6                              -0.45

 6.03 PlyA - 133169 133164    6                               1.05
 6.02 Term - 133537 133424  114  1  0  131   43    97 0.802   7.09
 6.01 Init - 134130 134080   51  0  0   37  103    30 0.454   0.61
 6.00 Prom - 137671 137632   40                              -4.75

 7.08 PlyA - 138607 138602    6                              -0.45
 7.07 Term - 139042 138879  164  2  2   34   55   224 0.042  10.82
 7.06 Intr - 153092 153012   81  0  0  100   92    29 0.328   3.19
 7.05 Intr - 155233 155141   93  2  0   69   93    94 0.911   7.02
 7.04 Intr - 163268 163189   80  1  2   69   99    48 0.830   2.28
 7.03 Intr - 164160 163903  258  2  0    9   91   168 0.001   4.86
 7.02 Intr - 176808 176721   88  1  1  106   91    91 0.574   9.31
 7.01 Init - 181508 181451   58  2  1   58   89     5 0.298  -0.88
 7.00 Prom - 182616 182577   40                              -4.15

 8.04 PlyA - 183220 183215    6                               1.05
 8.03 Term - 183415 183264  152  2  2   88   43   142 0.884   6.79
 8.02 Intr - 185893 185786  108  2  0   77   46    97 0.487   3.74
 8.01 Init - 188461 188275  187  1  1   62   85    62 0.221   2.60
 8.00 Prom - 191797 191758   40                              -3.65

 9.02 PlyA - 191993 191988    6                              -1.95
 9.01 Sngl - 192390 192004  387  0  0   71   39   216 0.877  10.96
 9.00 Prom - 192444 192405   40                              -7.35

10.04 PlyA - 192561 192556    6                               1.05
10.03 Term - 193345 192693  653  2  2   74   43   328 0.990  20.11
10.02 Intr - 195074 195012   63  0  0   98   84    37 0.761   2.07
10.01 Intr - 199307 199164  144  0  0  104   71    30 0.537   2.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 164027 163903  125  2  2   81   91   134 0.947  12.69
S.002 Sngl + 167195 167665  471  1  0   81   36   146 0.817   4.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:148726832_148928070|GENSCAN_predicted_peptide_1|96_aa
MICSAVWGMGWQKKGVGDGETESYRRSLTGFHSHKFQTAVLVRWLSPKSGQLETVSRGCE
WSNNKKKHSLSTCSGRDPCSHGAYILRSGGGDGSRT

>gi568815593f:148726832_148928070|GENSCAN_predicted_CDS_1|288_bp
atgatctgttctgcagtgtgggggatgggttggcagaagaaaggtgtgggagatggggaa
actgagtcctacaggcgatcacttactggctttcattcacacaagttccaaacggcagta
ctggtcaggtggctgtcgccgaagtcaggacaattggagacagtttcaaggggctgtgaa
tggagcaacaacaagaaaaaacactcattgagcacctgctctggcagagatccctgttcc
catggagcttacatcctgaggagtgggggtggagatgggtcgaggaca

>gi568815593f:148726832_148928070|GENSCAN_predicted_peptide_2|296_aa
MGTISEPIWRTNDAQQYHVLGTTEMTVMSIFSFHQDPSLPHRPYPLSSKEVNASSMTDFT
YYQLSYMEAENFSMPKSWSRSVPVVFTYVYQCMGMKTFWENMQETAEGGCLKVEELRIYG
EGEQIGNISYQIMYCSQAIQTLGTIRGYLEEKQLVYYFSKYYTYKTSNITKCKDYEIKAA
ACGIRKYLAEDMGASGPEVQEDLTGQATPKTSIGQMWAVNASLQLLLMAKAVWGRGKFTE
GLGLGSNRSTFVVQKIPGVAATLCFAPVAALFTQSLLHFPVTSKKYFRSLLLNRLP

>gi568815593f:148726832_148928070|GENSCAN_predicted_CDS_2|891_bp
atggggaccatctccgagcccatctggaggaccaatgatgcccagcagtatcacgttctg
ggaacaacagaaatgacagtgatgagcatcttcagctttcatcaggaccctagccttccc
catcgtccataccctttaagctccaaagaagtgaatgcttcaagcatgacagatttcact
tactatcaactttcatatatggaggctgagaactttagtatgccaaaatcatggagcaga
tctgtacctgttgtgtttacatatgtatatcagtgtatgggcatgaaaactttctgggag
aacatgcaagaaactgctgaaggtggttgcctcaaggtagaagaattaaggatctatggg
gaaggggagcaaattggcaacatttcctatcagattatgtattgttcacaggctatacaa
actctaggaactatcaggggttatttggaagaaaaacaactggtgtactatttttctaaa
tactacacctacaaaacatccaatattaccaagtgcaaagactatgaaataaaggcagca
gcatgtgggatcagaaagtatttagcggaagacatgggagcttcaggtccagaggtccag
gaagacctcactgggcaggccacaccaaagacatccataggccagatgtgggctgtgaat
gccagtttgcaactgctgctaatggcaaaggcagtgtgggggcgggggaagttcactgaa
ggtcttgggctgggaagtaacaggagcacgtttgtagttcagaaaattcctggggtagct
gcaacactctgctttgctcccgtggctgctctgtttacccagtctctcctccattttcca
gtaaccagtaagaagtactttaggtctctcctcctcaacaggctcccctga

>gi568815593f:148726832_148928070|GENSCAN_predicted_peptide_3|48_aa
MNTFLKRVTSQEEPQAGPSGGIPEEEGIVITGHDSSLGVIALKGLPVG

>gi568815593f:148726832_148928070|GENSCAN_predicted_CDS_3|147_bp
atgaacacatttctgaaaagagtgacatctcaagaagagcctcaggcaggtccttcagga
ggtatcccagaagaagaaggcattgttatcacaggacatgacagctccctgggtgttatt
gcccttaaaggccttccagtaggataa

>gi568815593f:148726832_148928070|GENSCAN_predicted_peptide_4|650_aa
METSVSVSLWMPPSQRVFTFCVCHHVFVLLGASVFVSGRVSVLDRGDFVPDGFCVRARAS
VHVGELGGCVSVSMAVVRYKSEHVCQGVFVPVCACLGGHSRFLPNVGQCRCAALCLETSS
RAGAQGRQVAATEEPKAPGLAERTAKRLLQSTGWNWQAPRAPSTRQAECAGRVPTTPTPQ
PLNEASRRPLAARRAPPWVRPLRRPQPVRSPARLRAMGQPGNGSAFLLAPNGSHAPDHDV
TQERDEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGL
AVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSL
LTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYANETCCDFFTNQAYAIASS
IVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKF
CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPL
IYCRSPDFRIAFQELLCLRRSSLKAYGNGYSSNGNTGEQSGYHVEQEKENKLLCEDLPGT
EDFVGHQENQTKMERGYETLKRTQQSKAETQAALRPGTLSQLQSWEGLLN

>gi568815593f:148726832_148928070|GENSCAN_predicted_CDS_4|1953_bp
atggagacatccgtgtctgtgtcgctctggatgcctccaagccagcgtgtgtttactttc
tgtgtgtgtcaccatgtctttgtgcttctgggtgcttctgtgtttgtttctggccgcgtt
tctgtgttggacaggggtgactttgtgccggatggcttctgtgtgagagcgcgcgcgagt
gtgcatgtcggtgagctgggagggtgtgtctcagtgtctatggctgtggttcggtataag
tctgagcatgtctgccagggtgtatttgtgcctgtatgtgcgtgcctcggtgggcactct
cgtttccttccgaatgtggggcagtgccggtgtgctgccctctgccttgagacctcaagc
cgcgcaggcgcccagggcaggcaggtagcggccacagaagagccaaaagctcccgggttg
gctgaacgcactgcgaagcggcttcttcagagcacgggctggaactggcaggcaccgcga
gcccctagcacccgacaagctgagtgtgcaggacgagtccccaccacacccacaccacag
ccgctgaatgaggcttccaggcgtccgctcgcggcccgcagagccccgccgtgggtccgc
ccgctgaggcgcccccagccagtgcgctcacctgccagactgcgcgccatggggcaaccc
gggaacggcagcgccttcttgctggcacccaatggaagccatgcgccggaccacgacgtc
acgcaggaaagggacgaggtgtgggtggtgggcatgggcatcgtcatgtctctcatcgtc
ctggccatcgtgtttggcaatgtgctggtcatcacagccattgccaagttcgagcgtctg
cagacggtcaccaactacttcatcacttcactggcctgtgctgatctggtcatgggcctg
gcagtggtgccctttggggccgcccatattcttatgaaaatgtggacttttggcaacttc
tggtgcgagttttggacttccattgatgtgctgtgcgtcacggccagcattgagaccctg
tgcgtgatcgcagtggatcgctactttgccattacttcacctttcaagtaccagagcctg
ctgaccaagaataaggcccgggtgatcattctgatggtgtggattgtgtcaggccttacc
tccttcttgcccattcagatgcactggtaccgggccacccaccaggaagccatcaactgc
tatgccaatgagacctgctgtgacttcttcacgaaccaagcctatgccattgcctcttcc
atcgtgtccttctacgttcccctggtgatcatggtcttcgtctactccagggtctttcag
gaggccaaaaggcagctccagaagattgacaaatctgagggccgcttccatgtccagaac
cttagccaggtggagcaggatgggcggacggggcatggactccgcagatcttccaagttc
tgcttgaaggagcacaaagccctcaagacgttaggcatcatcatgggcactttcaccctc
tgctggctgcccttcttcatcgttaacattgtgcatgtgatccaggataacctcatccgt
aaggaagtttacatcctcctaaattggataggctatgtcaattctggtttcaatcccctt
atctactgccggagcccagatttcaggattgccttccaggagcttctgtgcctgcgcagg
tcttctttgaaggcctatgggaatggctactccagcaacggcaacacaggggagcagagt
ggatatcacgtggaacaggagaaagaaaataaactgctgtgtgaagacctcccaggcacg
gaagactttgtgggccatcaagagaatcagaccaaaatggaaagaggatatgaaactcta
aaacgaacacagcagagtaaagcagaaacacaggctgccctacgtcctggcactctttct
cagctccaaagttgggaaggcctcctaaattga

>gi568815593f:148726832_148928070|GENSCAN_predicted_peptide_5|90_aa
MTYSNYFIFEDEEMEVQIREGCHHQLVSQLRASHHKPACFGVLVGGAAEIHTGYAFGCVY
QPQPRLPWLKVAEAEGFDYSGGPSLPAPYP

>gi568815593f:148726832_148928070|GENSCAN_predicted_CDS_5|273_bp
atgacctactccaactacttcatttttgaagatgaggaaatggaggtccagataagggaa
gggtgtcaccatcagcttgtgtcacagctaagggcttcccaccacaaacctgcgtgcttt
ggcgtcttagtaggaggggctgctgaaattcataccggatatgcctttggctgtgtttat
cagccccagcccaggctcccttggctgaaggtggctgaagcagagggctttgactattca
ggtggccccagcctgcctgcaccctatccctga

>gi568815593f:148726832_148928070|GENSCAN_predicted_peptide_6|54_aa
MHKAGPWQRIIWYKQSMMVPNLSKTRVEFLIEGFFSHALRFAEYHRTWKHQLGN

>gi568815593f:148726832_148928070|GENSCAN_predicted_CDS_6|165_bp
atgcacaaggcaggcccatggcaaagaattatctggtataaacagtcgatgatggtgccg
aatcttagtaagacaagagtggaatttctcatagagggctttttctctcacgcactgcgc
tttgcagaatatcacagaacttggaaacaccagcttgggaattaa

>gi568815593f:148726832_148928070|GENSCAN_predicted_peptide_7|273_aa
MEPPQASRIQVSSNSLSSSGLQTRLDDHSLRRYKGALDIEYKGQLMSARKLKLDPFLTPY
AKINSRWIKDLNIRCKTIKTLEENLGNTIQDIDMGKDFMTKTPKAMATEVKIDKWDLIKL
KSFHTAKETIIEVNRDMDEAGNHHSQQTNSETENQTPHVLTLKQEIGNDKPDANQSHKKN
GEEKECFKKRGEVFHMLVLLSFHFPESVHRPLSATLEVSGKLAASWVLHSSSPSLWNVLS
TLLDNDDWYDVDCYDGDDDDDDDDDNVTTRLNY

>gi568815593f:148726832_148928070|GENSCAN_predicted_CDS_7|822_bp
atggagcctccacaggcatccaggatccaggtttcttccaattctctatcatcctcaggt
ctccagacaaggctagatgaccactcactgagaaggtataaaggggctttggatattgaa
tataaggggcagctgatgtcagccagaaaactgaaactggaccccttccttacaccttat
gcaaaaattaactcaagatggattaaagacttaaacataagatgtaaaaccataaaaacc
ctagaagaaaacctaggcaataccattcaggacatagacatgggcaaagacttcatgact
aaaacaccaaaagcaatggcaacagaagtcaaaattgacaaatgggatctaattaaacta
aagagcttccacacagcaaaagaaactatcatcgaggtgaacagggacatggatgaagct
ggaaaccatcattctcagcaaactaactcagaaacagaaaaccaaacaccgcatgttctc
actctaaaacaagaaatagggaatgataagccagatgccaaccaatcacataagaaaaat
ggagaggagaaagaatgtttcaaaaagagaggagaagtattccacatgctagtcctactg
agctttcattttccagaatcagtccacaggcccttgtctgcaacccttgaggtctcaggc
aagctggctgcctcctgggtgctccactcctcaagtccctccctgtggaatgtcctgtcc
actttgcttgacaatgatgattggtatgatgtcgattgctatgatggtgatgatgatgat
gatgatgatgacgacaatgtgaccacaaggctcaattactga

>gi568815593f:148726832_148928070|GENSCAN_predicted_peptide_8|148_aa
MSEPLPSTDNLGLQNLSSSQASDLGGKGSENVATVWNSQACLVGQLLIDLIGDQSNLFLR
TSAQGKERGKLSGSGFGESLLLLKETVEAAREQVKELGECTPSSSRNPQGSVAESGSVHQ
RQSVHVAMICDDISTYMENKLNFHFCDL

>gi568815593f:148726832_148928070|GENSCAN_predicted_CDS_8|447_bp
atgtctgagcctctgcccagcactgacaatctggggctccagaatctgtcgtccagccag
gccagtgacctaggtgggaagggcagtgagaacgtagccactgtttggaattcacaggct
tgtttggtgggacaactcctaatagatttgattggggatcagagcaacctatttctccga
acctctgcccaaggaaaagagagaggcaaactctctggttcaggcttcggtgagagcctt
cttttactcaaagagactgtggaggctgccagagagcaagtcaaggagttgggagagtgc
accccaagtagttccaggaacccccagggcagtgttgctgaaagtggctctgtgcaccag
cgccaatctgtgcacgttgctatgatctgcgatgacattagcacatacatggagaataag
ttgaactttcatttctgtgacctctag

>gi568815593f:148726832_148928070|GENSCAN_predicted_peptide_9|128_aa
MGKDFMTNTPKAMETKAKIDKWDLTKLKSFCTAKESTIRVNRQPTEWEKIFTIYPSDKEL
ISRIYKELKQIYKKKVKQPHRKVGEGYEQKLHKRRHLCSQQTHEKMLIITGHQRNANQND
NETLSHTS

>gi568815593f:148726832_148928070|GENSCAN_predicted_CDS_9|387_bp
atgggcaaggacttcatgactaacacaccaaaagcaatggaaacaaaagccaaaattgac
aaatgggatctaactaaactaaagagcttctgcacagcaaaagaaagtaccatcagagtg
aacaggcaacctacagaatgggagaaaatttttacaatctacccatctgacaaagagcta
atatccagaatctacaaggaacttaaacaaatttacaagaaaaaagtcaaacaaccccat
cgaaaagtgggcgaaggatatgaacagaaacttcacaaaagaagacatttatgcagccaa
caaacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaatgac
aatgagacactatctcacaccagttag

>gi568815593f:148726832_148928070|GENSCAN_predicted_peptide_10|286_aa
XDIVMLLKAWALEKGKSGFESWLFHLLTESLWASFLTSQILSYLICKMAGPEPSESQHSS
REGLTLPSPGLEVLARAIRQEKEIKGIQLGKEEVKLPLFADDTIVYLENPVVSAQNLLKL
ISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLF
KENYKPLLNEIKEDTNKWKNIPCSWIGGIDIVKMAILPKGIYRFNAIPIKLPMTFFTELE
KTTLKFMWNQKRACIAKTIISQKNKAGGITLPDFKLYYKATVTTTA

>gi568815593f:148726832_148928070|GENSCAN_predicted_CDS_10|861_bp
ngagatattgtgatgcttttaaaagcatgggctttagagaaaggcaagtctgggtttgaa
tcatggcttttccacttactaactgagtcactttgggcaagtttcttaacctctcagatt
ctcagttacctcatctgtaaaatggctggcccagagccttctgaatctcaacacagcagt
agagaaggtttaaccttgccatcaccagggttggaagttctggccagggcaatcaggcag
gagaaagaaataaagggtattcaattaggaaaagaggaagtcaaattgcccctgtttgca
gatgacacgattgtatatttagaaaaccccgtcgtctcagcccaaaatctccttaagctg
ataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattc
ttatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcacaatt
gcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttc
aaggagaactacaaaccactgctcaatgaaataaaagaggacacaaacaaatggaagaac
attccatgctcatggataggaggaattgatatcgtgaaaatggccatactgcccaaggga
atttacagattcaatgccatccccatcaagctaccaatgactttcttcacagagttggaa
aaaactactttaaagttcatgtggaaccaaaaaagagcctgcattgccaagacaatcata
agccaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggct
acagtaaccacaacagcatga