GENSCAN 1.0	Date run:  7-Nov-116	Time: 16:04:08

Sequence gi568815593f:134014950_134246300 : 231351 bp : 47.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3182   3208   27  1  0   70   81    57 0.307   0.91
 1.02 Intr +   4897   5006  110  0  2   95   76    65 0.299   5.08
 1.03 Intr +  12385  12430   46  1  1  107   75    19 0.558   0.91
 1.04 Term +  16142  16240   99  1  0   79   45    96 0.893   2.53
 1.05 PlyA +  17404  17409    6                               1.05

 2.00 Prom +  17780  17819   40                              -5.76
 2.01 Init +  26513  26595   83  1  2   74   68    75 0.057   4.56
 2.02 Intr +  26638  26833  196  1  1   80   97    15 0.033   1.02
 2.03 Intr +  38504  38650  147  1  0   67   34    72 0.044   0.13
 2.04 Intr +  53664  53713   50  2  2   95   43    89 0.097   2.58
 2.05 Intr +  57559  57727  169  1  1   26   82   125 0.036   5.65
 2.06 Intr +  61365  61436   72  2  0   89   82    37 0.031   2.80
 2.07 Intr +  68638  68778  141  0  0   30   37   104 0.008   0.05
 2.08 Intr +  77954  78178  225  1  0   53   70    88 0.021   1.68
 2.09 Intr +  89324  89419   96  1  0   80   80    14 0.023   0.01
 2.10 Intr +  98711  98847  137  1  2   37   24   129 0.018   0.77
 2.11 Intr +  99203  99404  202  2  1   43  103    70 0.046   3.29
 2.12 Intr +  99928 100206  279  0  0   42   83   527 0.853  45.27
 2.13 Intr + 100372 100438   67  0  1  120  113    50 0.873   9.18
 2.14 Intr + 100960 101084  125  2  2   80  119   140 0.740  16.60
 2.15 Intr + 107432 107523   92  1  2   73   89    25 0.091  -0.11
 2.16 Intr + 107763 107907  145  0  1   43   75    75 0.354   1.98
 2.17 Intr + 114855 114951   97  2  1   79   94    -3 0.349  -1.02
 2.18 Intr + 117571 117791  221  2  2  121   33    76 0.503   3.42
 2.19 Intr + 123110 123215  106  1  1  102   82    54 0.583   5.99
 2.20 Intr + 124002 124089   88  1  1  113  105     8 0.961   4.03
 2.21 Intr + 127236 127355  120  0  0  120   76   115 0.994  13.11
 2.22 Intr + 127772 127934  163  2  1   80   76   299 0.999  27.88
 2.23 Intr + 128044 128151  108  0  0  119   83   174 0.964  20.48
 2.24 Intr + 128643 128691   49  2  1  129   94    53 0.938   8.25
 2.25 Intr + 131421 131536  116  1  2  114   92     1 0.329   3.27
 2.26 Intr + 135461 135522   62  1  2   22   74    53 0.161  -5.17
 2.27 Term + 136796 136979  184  2  1   79   44   106 0.464   2.32
 2.28 PlyA + 137234 137239    6                               1.05

 3.13 PlyA - 137906 137901    6                               1.05
 3.12 Term - 142819 142784   36  1  0   85   44    54 0.902  -1.96
 3.11 Intr - 143646 143506  141  0  0   50   96   212 0.994  18.75
 3.10 Intr - 146181 146038  144  0  0   42  119   144 0.971  13.38
 3.09 Intr - 152294 152221   74  0  2   29  116    64 0.401   2.43
 3.08 Intr - 159073 158977   97  1  1  101  115    67 0.857  10.28
 3.07 Intr - 166278 166219   60  0  0   82  108     4 0.171   0.73
 3.06 Intr - 171420 171336   85  2  1   88   58    16 0.008  -1.58
 3.05 Intr - 184255 184137  119  1  2  108   78    46 0.876   4.86
 3.04 Intr - 187072 186899  174  1  0   82   91    78 0.994   7.64
 3.03 Intr - 191182 190973  210  1  0   89   86    72 0.941   6.21
 3.02 Intr - 210946 210748  199  0  1  -35   50   451 0.080  28.35
 3.01 Intr - 211120 210973  148  2  1   81    7   250 0.810  15.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  65364  65211  154  0  1   58   79   144 0.877  10.15
S.002 Init +  99237  99404  168  2  0   77  103   107 0.824   8.88
S.003 Term - 182895 182823   73  2  1   73   39    73 0.809  -1.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:134014950_134246300|GENSCAN_predicted_peptide_1|93_aa
MVRASARLLPPPESGEDLLPHWPHTNTSSSVLVARNDFLSDMGNDRSPSDPLLHDQFPSS
KVVLDDHLVWGSLTLEEAICSPFQLIKKELNPT

>gi568815593f:134014950_134246300|GENSCAN_predicted_CDS_1|282_bp
atggtgcgggcatctgctcggcttctgcctcctcctgaatctggagaggacttgcttcct
cactggccccacaccaacacctcctcctctgtcctggttgccaggaacgactttctctct
gacatgggcaatgacaggtctccctcagacccactgcttcatgaccagttcccgagcagc
aaggtggtcctggatgaccacctggtgtggggatcattaaccttggaagaagccatttgc
agtccattccagctgatcaagaaagaactaaatccaacatag

>gi568815593f:134014950_134246300|GENSCAN_predicted_peptide_2|1179_aa
MANVLAEYKVLIQWSQDQLLREPWTSALGDGKDGGTELVGLISPDSNSEKRRPCLTSHSK
GPWSHAWDLGLLPSTQGALHGPMRSPQLQASLLGSCEPCQGQAPGRRILQEEALSAACME
SDPEDLTPGQLLWEEAWGETEQDFLIVFGVKKFHYNVARWLMFMDSTLGGKDQEFCELQG
DTALLWAETPDKCPLGLTISLQLDHPQVQKCPSHQISAGSSHRVEAFLSPPDSQVTFCKR
YVKELWNVQAPDFQASAGRGTPLHRCLHYEPSTGKDLPKATMCQARRPAELLEFPCLVVH
SFDQGLPKTPAAKASFKLMHNHPSMGIKVICGFMTLSHKSTSNLLQLETAAFWPLASLHV
LATTSPKKGGDLLTLSGCRGAGGCPQWVGIPERMQGLSQAKRAVEARVDADPGAIQMRWN
PGTFPRSANLDVSAWIERGRPRRKSLIGTGMEDGARAATAPRSSNAAGSLGYEHSLKQPQ
ALGSPQFKAQGALEPGHDTVHTTAAMRPAPRRAERTMPQLDSGGGGAGGGDDLGAPDELL
AFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESEGAAGGAGIPGVPGAGAGARGEAEA
LGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKETVYSAFNLLMHYPPPSGAGQHPQPQ
PPLALPGSTKPVSTAAHGNIHTSTATSSATLRLNHTVTPLTPCDWCFLLLCTNKALVEET
GVLSGHRGPHPQWYSAQILLLQAPLSDVKARRWVDWPHAPSRALCNCGNSLVPAGLRPEE
TATFFAGKVLWGSSIWGFSESTVRGEGVSLLAVARAVSVHTACEQTAAVYRENADCVYFS
PEPAGSWGHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLT
SGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESK
AEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYY
ELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTELLTSPAEPAPTSPGLSTALS
LPTPGPPQAPRSTLQSTQRGRKGISSCIRFSENSTEQKGMLLNTGTQTRGSQQYTRLQGN
KYIINELAIYHSNYVPHWKCVKQEHLRQHFSATTNDHLH

>gi568815593f:134014950_134246300|GENSCAN_predicted_CDS_2|3540_bp
atggccaacgtcctagcagaatataaggtgcttatccaatggtcccaggaccagctgctc
agggagccctggacatcagcgcttggggatgggaaagatggtgggaccgagctggtgggc
ctcatttcaccagactcaaactcagagaaacgcaggccttgcctaacatcacacagcaag
gggccttggagccatgcctgggacttgggcctcctgccttccacacagggcgctttgcat
ggccccatgaggagcccccagctccaggcatccctgttgggctcctgtgagccgtgccag
gggcaggcgccaggaaggaggatcctgcaggaggaagcactgagcgcagcctgcatggag
tcagacccggaggacctcaccccagggcagctgctctgggaggaagcctggggggaaaca
gaacaggattttctcattgtctttggtgtcaagaagtttcactacaacgtggctaggtgg
ctgatgttcatggacagcacactggggggaaaggaccaggagttctgtgaactgcagggt
gacacagctctgctctgggcagaaacaccggacaaatgcccattgggtctgaccatcagc
ctgcaactggaccatcctcaggtgcagaagtgtccaagccaccaaatctctgctggatcc
tcacatcgtgtggaggccttcctgagtcccccagactcacaggtcactttctgcaagcgc
tacgtcaaagagctctggaatgtccaggctccagacttccaggcctcagctggccgtggt
acccctctgcacagatgtctccactatgagccttcaactggcaaggacttaccaaaagca
actatgtgccaggctaggagaccagcggagctgctagaatttccttgtctggtggttcac
agctttgaccaaggtttgccaaagacacctgcagcaaaggcctctttcaagctaatgcac
aatcatccttccatggggataaaggtgatttgtggattcatgaccctgagtcataaatct
accagcaatctgctgcagttggaaacagcagctttctggcccttggcaagcctgcatgta
cttgccactacaagccccaagaagggaggtgacttgctcacactcagtgggtgcaggggt
gctggcggctgcccacagtgggtgggcatccctgagcggatgcaggggctgagccaggcc
aagcgcgccgtggaggcccgcgtggacgcagacccgggtgccatacagatgcgctggaat
ccaggcactttcccgcgctccgcaaatctagatgtttcagcctggatcgagcgagggcgg
cctagaaggaagtccctgattggcacagggatggaggatggggcaagagccgcaacagcg
ccgcggagttccaacgctgccggttccctggggtacgagcacagcctcaagcagcctcaa
gccctaggaagcccccagttcaaagcacagggcgcattggagcctgggcacgatacagtt
cacaccacggctgcgatgcgccccgcgccccggcgggcggagcgcaccatgccgcagctg
gactccggcgggggcggcgcgggcggcggcgacgacctcggcgcgccggacgagctgctg
gccttccaggatgaaggcgaggagcaggacgacaagagccgcgacagcgccgccggtccc
gagcgcgacctggccgagctcaagtcgtcgctcgtgaacgagtccgagggcgcggccggc
ggcgcagggatcccgggggtcccgggggccggcgccggggcccgcggcgaggccgaggct
ctcgggcgggaacacgctgcgcagagactcttcccggacaaacttccagagcccctggag
gacggcctgaaggccccggagtgcaccagcggcatgtacaaagagaccgtctactccgcc
ttcaatctgctcatgcattacccacccccctcgggagcagggcagcacccccagccgcag
cccccgctggctctaccaggttccaccaagccagtttccacggcagcacacgggaatatt
cataccagcactgccacctcctcagctactctgagactcaaccatacagtcacacccctc
acaccttgtgactggtgcttcctgctgctgtgtacaaacaaggctctggtggaggaaaca
ggtgttttatcaggtcacaggggcccccacccccaatggtacagtgcacagatcctcctg
ctgcaggcccctttatctgatgtcaaggccaggcggtgggtggactggccacacgcacct
agcagagctctgtgcaactgtggcaacagccttgtgccagcaggcttgaggccagaggaa
acagcaactttcttcgctgggaaagtgttgtggggctcaagcatttgggggttttcagag
tcaaccgtcagaggcgagggagtttctctgctggcggtggcaagggctgtcagcgtgcac
acagcctgcgagcagaccgctgcggtctacagggaaaatgccgactgtgtttatttttca
cctgagcctgcaggaagttgggggcacaaggccaatcagcccccccacggtgtcccccaa
ctctctctctacgaacatttcaacagcccacatcccacccctgcacctgcggacatcagc
cagaagcaagttcacaggcctctgcagacccctgacctctctggcttctactccctgacc
tcaggcagcatggggcagctcccccacactgtgagctggttcacccacccatccttgatg
ctaggttctggtgtacctggtcacccagcagccatcccccacccggccattgtgcccccc
tcagggaagcaggagctgcagcccttcgaccgcaacctgaagacacaagcagagtccaag
gcagagaaggaggccaagaagccaaccatcaagaagcccctcaatgccttcatgctgtac
atgaaggagatgagagccaaggtcattgcagagtgcacacttaaggagagcgctgccatc
aaccagatcctgggccgcaggtggcacgcgctgtcgcgagaagagcaggccaagtactat
gagctggcccgcaaggagaggcagctgcacatgcagctatacccaggctggtcagcgcgg
gacaactacgggaagaagaagaggcggtcgagggaaaagcaccaagaatccaccacagaa
ctgcttactagccctgcggagccggcacctacatccccaggtctctccactgctctcagc
ctcccaaccccagggcccccacaggccccccgcagcaccctgcagagcacacagagagga
agaaagggaatcagttcctgcatccgtttctcagaaaacagcacagaacagaagggaatg
ctgctcaatactggcacacagaccagaggtagccagcagtacacaagactgcaaggcaac
aagtacattatcaatgaattagccatctatcactcaaactatgtcccgcattggaagtgt
gtcaagcaagagcaccttcgacaacacttttcggccaccactaatgatcatctccactga

>gi568815593f:134014950_134246300|GENSCAN_predicted_peptide_3|495_aa
XSRALEPQRAEEEAQRPTAEYCGESQRASASLNSRQKYTRNRRRRVRVGPAERQPAGAGG
IMDEKVFTKELDQWIEQLNECKQLSESQVKSLCEKVSCSTAADSRRGAEPAEEKAAAKEI
LTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVT
LLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTAL
VDGQGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSLLLCQFFPSSKYGNDPR
LSTHTTFSLLFQRLFPFDSRNIIWPLPGKFSQMPSIKLQSSDGEIFEVDVEIAKQSVTIK
TMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVW
DQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEE
EEAQVRKENQWCEEK

>gi568815593f:134014950_134246300|GENSCAN_predicted_CDS_3|1488_bp
nagagccgagctctggagcctcagcgagcggaggaggaggcgcagcggccgacggccgag
tactgcggtgagagccagcgggccagcgccagcctcaacagccgccagaagtacacgagg
aaccggcggcggcgtgtgcgtgtaggccccgcggagcggcagccggctggggcgggtggc
atcatggacgagaaggtgttcaccaaggagctggaccagtggatcgagcagctgaacgag
tgcaagcagctgtccgagtcccaggtcaagagcctctgcgagaaggtgagctgtagtacg
gctgcggacagccgccgcggggccgagcccgccgaggaaaaggcggccgctaaagaaatc
ctgacaaaagaatccaacgtgcaagaggttcgatgtccagttactgtctgtggagatgtg
catgggcaatttcatgatctcatggaactgtttagaattggtggcaaatcaccagataca
aattacttgtttatgggagattatgttgacagaggatattattcagttgaaacagttaca
ctgcttgtagctcttaaggttcgttaccgtgaacgcatcaccattcttcgagggaatcat
gagagcagacagatcacacaagtttatggtttctatgatgaatgtttaagaaaatatgga
aatgcaaatgtttggaaatattttacagatctttttgactatcttcctctcactgccttg
gtggatgggcagggatataactggtgccatgaccggaatgtagtaacgattttcagtgct
ccaaactattgttatcgttgtggtaaccaagctgcaatcatggaacttgacgatactcta
aaatactctttactcctttgccagttcttcccatcctctaaatatggaaatgacccaagg
cttagtactcacacgactttttctctcctcttccagcgcttatttccatttgacagcaga
aatataatctggccacttcctggcaaattcagtcaaatgccttcaattaagttgcagagt
tctgatggagagatatttgaagttgatgtggaaattgccaaacaatctgtgactattaag
accatgttggaagatttgggaatggatgatgaaggagatgatgacccagttcctctacca
aatgtgaatgcagcaatattaaaaaaggtcattcagtggtgcacccaccacaaggatgac
cctcctcctcctgaagatgatgagaacaaagaaaagcgaacagatgatatccctgtttgg
gaccaagaattcctgaaagttgaccaaggaacactttttgaactcattctggctgcaaac
tacttagacatcaaaggtttgcttgatgttacatgcaagactgttgccaatatgatcaag
gggaaaactcctgaggagattcgcaagaccttcaatatcaaaaatgactttactgaagag
gaggaagcccaggtacgcaaagagaaccagtggtgtgaagagaagtga