GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:10:29

Sequence gi568815593r:115731807_115941693 : 209887 bp : 38.35% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    953    948    6                               1.05
 1.03 Term -   3982   3872  111  1  0   78   44   145 0.804   6.68
 1.02 Intr -  13508  13330  179  0  2   34   80   135 0.647   6.02
 1.01 Init -  15313  15217   97  1  1   54  103    94 0.958   8.02
 1.00 Prom -  16293  16254   40                              -4.25

 2.04 PlyA -  17152  17147    6                               1.05
 2.03 Term -  19474  19410   65  2  2   54   32   106 0.621  -1.33
 2.02 Intr -  19584  19513   72  1  0  105   87     6 0.585   0.66
 2.01 Init -  20530  20374  157  1  1   68   39   139 0.993   7.12
 2.00 Prom -  21387  21348   40                               0.45

 3.00 Prom +  32852  32891   40                              -4.95
 3.01 Init +  44473  44568   96  0  0   48   35   105 0.248   1.56
 3.02 Intr +  53948  54182  235  1  1   56   89   216 0.706  14.84
 3.03 Intr +  63923  64020   98  0  2   61  105    55 0.143   3.31
 3.04 Term +  70231  70386  156  0  0   55   52   110 0.400   1.05
 3.05 PlyA +  72106  72111    6                               1.05

 4.10 PlyA -  72948  72943    6                               1.05
 4.09 Term -  73656  73627   30  0  0  111   49    34 0.632  -1.32
 4.08 Intr -  74712  74543  170  1  2   42   82   117 0.754   5.24
 4.07 Intr -  79509  79355  155  2  2   32   47    82 0.687  -2.71
 4.06 Intr -  81452  81375   78  1  0   99   98    90 0.976   8.85
 4.05 Intr -  84630  84422  209  0  2   66   99   369 0.090  32.75
 4.04 Intr - 100858 100796   63  1  0   90   83    52 0.615   2.90
 4.03 Intr - 105958 105822  137  2  2  101   56   156 0.846  13.07
 4.02 Intr - 109760 109584  177  0  0    8   27   294 0.413  14.27
 4.01 Init - 111131 110474  658  2  1   29   64   341 0.678  21.27
 4.00 Prom - 119528 119489   40                              -3.85

 5.04 PlyA - 119793 119788    6                               1.05
 5.03 Term - 125231 125098  134  0  2   35   38   138 0.270   0.77
 5.02 Intr - 139872 139781   92  2  2  125   69    73 0.210   7.82
 5.01 Init - 145703 145555  149  2  2   83    1    92 0.418  -0.39
 5.00 Prom - 145882 145843   40                              -3.85

 6.02 PlyA - 146400 146395    6                              -1.75
 6.01 Sngl - 147652 146615 1038  1  0   42   42   267 0.887  14.36
 6.00 Prom - 147811 147772   40                             -10.35

 7.02 PlyA - 148182 148177    6                               1.05
 7.01 Sngl - 149138 148497  642  2  0   50   34   302 0.803  16.93
 7.00 Prom - 149348 149309   40                              -7.25

 8.02 PlyA - 149635 149630    6                               1.05
 8.01 Sngl - 150521 150129  393  2  0   79   42   297 0.757  20.19
 8.00 Prom - 157386 157347   40                              -6.65

 9.00 Prom + 157865 157904   40                              -4.05
 9.01 Init + 160430 160447   18  1  0  121    6    27 0.167  -2.13
 9.02 Intr + 163281 163352   72  2  0  126   74    69 0.689   7.98
 9.03 Intr + 171079 171186  108  0  0   89   94    61 0.633   6.36
 9.04 Term + 181556 181684  129  1  0   80   42    97 0.488   1.50
 9.05 PlyA + 182149 182154    6                               1.05

10.03 PlyA - 182298 182293    6                               1.05
10.02 Term - 189814 189690  125  2  2   33   48   159 0.501   3.97
10.01 Init - 193912 193702  211  1  1   86   85    73 0.460   5.79
10.00 Prom - 194130 194091   40                              -4.45

11.00 Prom + 198784 198823   40                              -8.05
11.01 Init + 202903 203141  239  0  2   76   47   189 0.556  11.13
11.02 Intr + 204349 204459  111  1  0   54   41   143 0.513   4.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  84591  84422  170  0  2   67   99   362 0.801  34.25


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_1|128_aa
MHSEATKWITLEGNDRDKAKENALNLESLFLDALDSSEQREALYVWEKVRDENKSLCLVI
QRILDGPRPSRWYLHKSARTTVLLDLQYSLKQGSFGEQYGQFIQVENSCPPYVPAGRWGS
NARDSLLS

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_1|387_bp
atgcacagtgaagccacaaaatggataactcttgagggaaatgacagagacaaagccaaa
gagaatgcactgaatcttgagagtcttttcctggatgctttagatagctcagaacagaga
gaagccctgtatgtttgggagaaagtaagggacgagaacaagagtctctgcctggtaatc
cagagaattctggatggtccaagaccatcaaggtggtacctccacaagtctgcaagaacc
acagtgttactggatttgcagtactccctaaagcaggggagtttcggtgaacagtacggg
cagttcattcaagtggaaaattcctgtcctccgtatgtgccagcaggtcggtggggttcc
aatgcccgtgacagcttgttgtcttga

>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_2|97_aa
MDAAGGDYPKQTNTGTENQMLHVLTYKWELHNENTWIPGGKQETSKAYLRVEVQHAGTSM
NCFHPTDFCWSLWEALGEMQTVFKQPDSIPDGAGIEA

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_2|294_bp
atggatgcagctggaggcgattatcctaagcaaactaacacaggaacagaaaatcaaatg
ctgcatgttctcacttataagtgggagctacacaacgagaacacatggataccaggaggg
aaacaagagacatcgaaggcctacttgagagtggaggtccagcatgctggtaccagcatg
aactgtttccatccaactgacttttgctggagtttgtgggaagcccttggtgaaatgcag
actgtattcaagcaacctgattccataccggatggagctggaattgaagcttaa

>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_3|194_aa
MSKAKTYGEDCSKEEQVTVQVKVPSTVLRTNQITANRQGSPSSTLAPESASQQQPSSSDH
SKVAENPSVSRHFTSESPAVSECQDSENLHKINSGFAPADYLTSTVLTVSYLQHQNPPDF
WGPLLKVCISGLHPRPTDLDSLEDLDNKGEKKEMTLSDNPKCFRECLEISLLDSVIGKFL
SGKMASELKPDGQE

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_3|585_bp
atgagcaaagcaaagacatatggagaggattgcagcaaggaggagcaggtgacagtgcaa
gtaaaagtacctagcacagtgcttcgcacaaaccagataacagccaatcggcaagggtct
ccctccagtacccttgctccagagtcagccagtcaacagcagccttcctccagtgaccac
agtaaggtagctgaaaatccttcagtctctaggcacttcacttctgaaagcccggcagtc
tctgaatgtcaggattctgaaaacctacataagatcaactctggctttgctccagcagac
tatcttacaagcacagttcttactgtgtcttaccttcagcatcagaatcccccagatttc
tggggaccgttgttaaaagtgtgtatttctggtcttcatcctagacccacagacttggac
tctctggaggatttagacaataaaggagagaaaaaagaaatgacactttcagataaccct
aagtgcttcagagagtgcttagagatttcactgttagatagtgtgattgggaaattcctc
tctgggaagatggcatctgaactgaaacctgatgggcaagaatga

>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_4|558_aa
MRANSHTWKNAKPEAEIITFRYRTTAPISQLQTSPVTSRVNNLQPAGKKPDKNIRSSHIF
LFNKETPESHTGQSVTYRNMQKRDCTERAVIKRRKPKFLCYERTTVKNGSPSVQRTERSP
PGKDGSRRRGARRTSSTPSSSSRANCSRGRQEGSRAGWALGDWAQGSAARLGCGCPIGEG
RAPGSLQGLARAARKACSPPTGGGTARAKPRRWLTARQGVSPSKMAEEPQSVLQLPTSIA
AGGEGLTDVSPETTTPEPPSSAAVSPGTEEPAGDTKKKIDILLKAVGDTPIMKTKKWAVE
RTRTIQGLIDFIKKFLKLVASEQLFIYVNQSFAPSPDQEVGTLYEPSSETRAQPAPHEME
QTEVLKPRTLADLIRILHQLFAGDEVNVEEVQAIMEAYESDPTEWAMYAKFDQYRYTRNL
VDQGNGKFNLMILCWGEGHGSSIHDHTNSHCFLKMLQGNLKETLFAWPDKKSNEMVKKSE
RVLRENQCAYINDSIGLHRVENISHTEPAVSLHLYSPPFDTCHAFDQRTGHKNKVTMTFH
SKFGIRTPNATSGSLENN

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_4|1677_bp
atgagggcaaattcccatacgtggaaaaatgccaaaccagaagctgaaatcataactttt
aggtatagaaccacagctccaatcagtcaactacaaacgtcgccggttacttcgagggta
aataatttgcagccagctggtaaaaagcctgataaaaatattaggtcctcacatatcttc
cttttcaataaggagacacctgaaagtcacactgggcagtctgtcacgtatcgaaacatg
cagaagagagactgtacagaacgtgcagttatcaaacgcaggaagccaaagttcctgtgc
tatgagaggaccacagtgaaaaacggtagcccatctgtccaaagaacagaaagaagtcca
cctggaaaggatgggagtcggcggaggggggcgagaagaacgagttccacgccgtcttcc
tcctcccgggctaactgcagccgcgggcggcaggaaggcagccgcgcggggtgggctctt
ggggactgggcgcagggctccgcggcgcggctgggctgcggctgcccgatcggcgagggc
cgggccccgggaagtctccagggcctcgcccgcgcagccaggaaagcatgcagcccaccg
acgggcggaggaaccgcccgggcaaagccacgtcggtggctgaccgcgcggcagggagtg
tctccaagcaagatggcggaggagccgcagtctgtgttgcagcttcctacttcaattgct
gctggaggggaaggacttacggatgtctccccagaaacaaccaccccggagcccccgtct
tccgctgcagtttccccgggaacagaggaacctgctggcgacaccaagaaaaaaattgac
attttgctaaaggctgtgggagacactcctattatgaaaacaaagaagtgggcagtagag
cgaacacgaaccatccaaggactcattgacttcatcaaaaagtttcttaaacttgtggcc
tcagaacagttgtttatttatgtgaatcagtcctttgctccttccccagaccaagaagtt
ggaactctctatgagcccagcagtgagacgcgcgcgcagccagctccccacgagatggaa
cagaccgaagtgctgaagccacggaccctggctgatctgatccgcatcctgcaccagctc
tttgccggcgatgaggtcaatgtagaggaggtgcaggccatcatggaagcctacgagagc
gaccccaccgagtgggcaatgtacgccaagttcgaccagtacaggtatacccgaaatctt
gtggatcaaggaaatggaaaatttaatctgatgattctctgttggggtgaaggacatggc
agcagtattcatgatcataccaactcccactgctttctgaagatgctacagggaaatcta
aaggagacattatttgcctggcctgacaaaaaatccaatgagatggtcaagaagtctgaa
agagtcttgagggaaaaccagtgtgcctacatcaatgattccattggcttacatcgagta
gagaacatcagccatacggaacctgctgtgagccttcacttgtacagtccaccttttgat
acatgccatgcctttgatcaaagaacaggacataaaaacaaagtcacaatgacattccat
agtaaatttggaatcagaactccaaatgcaacttcgggctcgctggagaacaactaa

>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_5|124_aa
MDEAGNHHSQQTNTGTENQTLHVLIHKWELHNENTWTQGGEHHTPGLVRGYVQMYGCGQG
VQCTQGYITTMIMKFKLDKEKCWQYSTKKISSGGYQRLVVGIKGGTGKAKMLIKGHKVSV
RLEE

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_5|375_bp
atggatgaagctggaaaccatcactctcagcaaacgaacacgggaacagaaaaccaaaca
ctgcatgttctcattcataagtgggagttgcacaatgagaacacatggacacagggaggg
gaacatcacacaccgggacttgtcagggggtatgttcagatgtatgggtgtgggcaagga
gttcagtgtacacaaggctatatcactaccatgattatgaaatttaagctggataaggaa
aaatgctggcaatactcaactaagaaaatcagtagcggtggttaccagcggctggtggtg
ggaataaaaggaggaacggggaaagcaaaaatgttgatcaaagggcacaaagtttcagtc
agactggaggaataa

>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_6|345_aa
MIISIDAEKAFDKIQHPFTLKTLSKLRIDGTYLKIIRAIYDKTIANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNTVLEVLARAIRQEKEINCIHRGREKVKLSLFADDMIVYLENSIVS
AQNLLKLISNFSKVSGYKTNVQKSQAFLYTNNRQTESQIRSELPFTIATKRIKYLGIQLT
RDVKGLFKENYKLLLKEIRQNTNKWKNIPCSWIGRISIVKMATLSNVIYRFNVIPIKLPL
TFFTELQKSTLNFIWNQKRACTAKTILNKRNKAEGITIPDFKLYYKARVTQTAWYWCQNR
YTHQGNRTEASEIMPHIYNHLTFGKSDKNKKWGKDPCLIDVGKTG

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_6|1038_bp
atgattatttcaatagatgcagaaaaggcctttgataaaattcaacaccccttcacacta
aaaactctcagtaaactacgtatagatggaacatatctcaaaataataagagctatttat
gacaaaaccatagccaatatcatactgaatgggcaaaagctggaagcattccctttgaaa
actggcacaagacaaggatgccctctctcaccactcctattcaacacagtattggaagtt
ctggccagggcaatcaggcaagagaaagaaataaactgtattcatagaggaagagagaaa
gtcaaactgtctctgtttgcagatgacatgattgtatatttagaaaactccatagtctca
gcccaaaatctcctgaagctgataagtaacttcagcaaagtctcaggatacaaaaccaat
gtgcaaaagtcacaagcattcctatacaccaataatagacaaacggagagccaaattagg
agtgaactcccattcacaattgctacaaagagaataaaatacctaggaatacaacttaca
agggatgtgaagggcctcttcaaggagaattacaaactactgctcaaggaaataagacag
aacacaaacaaatggaaaaacattccatgctcatggataggaagaatcagtatcgtgaaa
atggccacactgtccaacgtaatttatagattcaatgttatccccatcaagctaccattg
actttcttcacagaattacaaaaaagtactttaaacttcatatggaaccaaaaaagagcc
tgtacagccaagacaatcctaaacaaaaggaataaagctgaaggcatcacaatacctgac
ttcaaactatactataaggctagagtaacccaaacagcatggtactggtgccaaaacagg
tatacacaccaagggaacaggacagaggcctcagaaataatgccacacatctacaaccat
ctgacctttggtaaatctgacaaaaacaagaaatggggaaaagatccctgtttaatagat
gttgggaaaactggctag

>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_7|213_aa
MVKGSTQQEELAFLNIYAPNTGAPRFIKQVLRNIQRDSDSHIIVGEFNTPLSILDRSTRQ
KINKDIRNFNSAVDQVDLIDIYRMLHPKSTEYTFFSAPHHTYSKIDHIIGSKILPSKCKR
TEIIMNRLSDHSAIKLELRIKKLTQNLTTTWKLNNLLQSDYWVNNEIKVEINEFFETNEN
KDTMYQNFWDTAKAVFQWKFIALKSPQEKAGKI

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_7|642_bp
atggtaaagggatcaacccaacaagaagagctagctttcctaaatatatatgcacccaac
acaggagcacccagattcataaagcaagttcttagaaacatacaaagagattcagactcc
cacataatagtgggagagtttaacaccccattgtcaatattagacagatccacaagacag
aaaattaacaaggatattcggaacttcaactcagctgtggaccaagtggacctaatagac
atctacagaatgctccaccccaaatcaacagaatatacattcttctcagcaccacatcac
acttattctaaaattgaccacataattggaagtaaaatactccccagcaaatgcaaaaga
acagaaatcataatgaacagactctcagaccacagtgctatcaaattagaactcaggatt
aagaaactcactcaaaaccttacaactacatggaaactgaacaacctgctccagagtgac
tactgggtaaataatgaaattaaggtagaaataaatgagttctttgaaaccaatgagaac
aaagatacaatgtaccagaatttctgggacacagctaaagcagtgtttcagtggaaattc
atagcactaaaatctccacaggagaaagcgggaaagatctaa

>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_8|130_aa
MRKNQCKKSENSKSQTASSPPKVHSSSKAREQNWKVNEFDELTEVGFRWWVITNSSELKE
HVLTQCKEAKSLDKRSEELLTRITSLERNINDLMELKNTAGELHEAHTVSIAKSIKQKKG
YRRLKLNLMK

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_8|393_bp
atgaggaaaaaccagtgcaaaaagtctgaaaattccaaaagccagactgcctcttctcct
ccaaaggtccacagttcctcaaaagcaagggaacaaaactggaaggtgaatgagtttgat
gaattgacagaagtaggcttcagatggtgggtaataacaaactcctctgagctaaaggag
catgttctaacccaatgcaaggaagctaagagccttgataaaaggtcagaggaattgcta
actagaataaccagtttagagaggaacataaatgacctgatggagctgaaaaacacagca
ggagaacttcatgaagcacacacagtatcaatagccaaatcaatcaagcagaagaaagga
tatcggagattgaagctcaacttaatgaaataa

>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_9|108_aa
MGSGLEVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVLETNMNEIVTQIDAQN
KLEKSEAGLAGAPARAVSAVKNMNLPEIPRNINIGDISIKVPNLPSFK

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_9|327_bp
atggggagcggtttggaggtatttgtggaaacattagacaaatgttttgaaaatgtctgt
gagctggatttgattttccatgtagacaaggttcacaatattcttgcagaaatggtgatg
gggggaatggtattggagacaaatatgaatgagattgttacacaaattgatgcacaaaat
aagctggaaaaatctgaggctggcttagcaggagctccagcccgtgctgtatcagctgta
aagaatatgaatcttcctgagatcccaagaaatattaacattggtgacatcagtataaaa
gtgccaaacctgccctcttttaaataa

>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_10|111_aa
MQPGKESSYPEYVSIPVRINLLPIQDGRHPKLLATKWLVSSSEGAESGAEPCSLLLVDGI
FDTSSSSISLGRPCEEPWLWVTQISTAGGSSQRVTQLSGHCQQLKKRVPQS

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_10|336_bp
atgcagccaggaaaggaaagttcatatccagaatatgtatcaattccagtcagaattaat
ttgctccctattcaagatggaaggcatccaaagttacttgccaccaagtggctggtttcc
tcaagcgaaggtgctgaatcaggggctgagccttgctctctgttactggtagatgggata
tttgacacaagcagtagctcaatcagccttggacgtccttgtgaggagccatggctttgg
gtgacgcagatctctacagctggtggcagttctcaaagagtaactcaactgagtggtcac
tgccagcagctgaagaaacgagtgccgcagtcctga

>gi568815593r:115731807_115941693|GENSCAN_predicted_peptide_11|117_aa
MPKDVDGPAEKQGIPRDSLGTTGRRAVGLKESFADVPPSPTSSLLVWGDHVNPHLKTCSS
DTSTQSLGLKAWGATLPLEWQDSNLVVDQKALLPERLLPHTLEEGMLHRETKKNLNS

>gi568815593r:115731807_115941693|GENSCAN_predicted_CDS_11|351_bp
atgcctaaggatgtagatggcccagcagagaagcagggaatccctcgagacagtttagga
accacaggacgccgggccgtggggctgaaggagagctttgctgatgtgccaccctcaccc
acatcaagcctccttgtctggggagatcacgtgaatccacatttgaagacctgctcttcg
gataccagcacacagagcctgggtcttaaagcttggggtgccacattgcctcttgaatgg
caggactctaatctggttgtggatcaaaaggccctgcttccagagaggctcctgccccat
actctggaggaaggaatgctgcacagagagaccaagaagaatctgaacagn