GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:40:04

Sequence gi568815593f:68190729_68397598 : 206870 bp : 40.51% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11062  11127   66  0  0   74  103    46 0.430   6.02
 1.02 Term +  13338  13562  225  2  0   33   42   128 0.482  -1.50
 1.03 PlyA +  14621  14626    6                               1.05

 2.05 PlyA -  15386  15381    6                               1.05
 2.04 Term -  20664  20115  550  2  1   40   49   274 0.162  11.48
 2.03 Intr -  24811  24445  367  2  1  102   19   158 0.009   3.58
 2.02 Intr -  25140  25020  121  0  1   61   11   167 0.210   5.45
 2.01 Init -  26347  26273   75  1  0   69   44   104 0.242   5.24
 2.00 Prom -  27069  27030   40                              -4.85

 3.00 Prom +  31352  31391   40                              -2.45
 3.01 Init +  35948  36281  334  1  1   92   86   278 0.920  25.50
 3.02 Intr +  59422  59694  273  2  0   91    4   119 0.002   0.39
 3.03 Intr +  82662  82754   93  1  0   64   86   103 0.355   6.72
 3.04 Intr +  83211  83345  135  1  0   96   95    25 0.678   3.62
 3.05 Intr +  88874  89005  132  0  0   76   72   200 0.994  16.90
 3.06 Intr +  89800  90001  202  2  1   72  111    36 0.874   1.72
 3.07 Intr +  90199  90278   80  1  2   65   95    44 0.567   1.08
 3.08 Intr + 101531 101633  103  0  1   87   94    94 0.980   8.21
 3.09 Intr + 102373 102471   99  1  0   99  121   133 0.999  16.01
 3.10 Intr + 102575 102755  181  2  1  100   90   131 0.993  13.45
 3.11 Intr + 102981 103106  126  2  0   88  109   141 0.999  16.16
 3.12 Intr + 103808 103950  143  1  2   65   81   172 0.999  12.43
 3.13 Intr + 104420 104596  177  2  0  116   95   165 0.999  18.11
 3.14 Intr + 104692 104760   69  1  0   90   89   111 0.998   8.78
 3.15 Intr + 105443 105613  171  2  0   43   31   204 0.946   8.34
 3.16 Term + 106684 106873  190  1  1   98   48   167 0.998   9.64
 3.17 PlyA + 108004 108009    6                               1.05

 4.03 PlyA - 108108 108103    6                               1.05
 4.02 Term - 116089 115940  150  1  0  114   36    98 0.512   4.13
 4.01 Init - 125338 125285   54  1  0   77  107    30 0.598   5.19
 4.00 Prom - 130331 130292   40                              -6.15

 5.00 Prom + 131716 131755   40                              -9.15
 5.01 Sngl + 134700 134945  246  2  0   13   39   624 0.985  44.83
 5.02 PlyA + 135614 135619    6                               1.05

 6.00 Prom + 145979 146018   40                              -5.05
 6.01 Init + 151160 151249   90  1  0   59   74    44 0.049   0.64
 6.02 Intr + 157983 158094  112  2  1  106   85    58 0.314   6.33
 6.03 Intr + 179485 179568   84  2  0  104   85   103 0.812  10.47
 6.04 Intr + 199123 199253  131  2  2   88  100   119 0.288  12.59
 6.05 Term + 201905 202015  111  1  0   60   48    67 0.424  -2.52
 6.06 PlyA + 205887 205892    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  75428  75309  120  2  0   71   87    99 0.880   8.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:68190729_68397598|GENSCAN_predicted_peptide_1|96_aa
MDWRMEVVMVVEMMVCANTPGQGPGSVGSTDISGSPPVEGTKAGVSFEKFFLSSEIVQHS
FLDKGLIIYQCDFALNFYASSANMNILKQILLPRQL

>gi568815593f:68190729_68397598|GENSCAN_predicted_CDS_1|291_bp
atggattggcgaatggaggtggtgatggtggtggaaatgatggtgtgtgcaaacactccc
ggacaggggccaggttctgtcggcagcactgacatctctgggtcccctccagtggaggga
acaaaggctggggtttcttttgaaaaattctttctgagcagtgagattgtccaacacagt
ttccttgataaagggctcattatctatcagtgtgactttgcccttaatttttacgccagc
agtgccaacatgaacatactcaagcaaatccttttacccagacagttgtaa

>gi568815593f:68190729_68397598|GENSCAN_predicted_peptide_2|370_aa
MKPPNKEQTHTRTPTALQLKGLTVEPGCDPPAVPDPCLPSPTASLPPSPLPLLPPTPLQL
LATPLPAGMPRAAVPRAASAAECSGSTRPGPARLLGVSQRRGGGVRGGRRQVQTSLEAGC
VSNPSVFQPTPGFFEPLAPQQSGWGGEDSDSRARQSGEALQFLVSPALPSEWAENPRHPP
GAPGVKEGKEIGGILAHPRDLWNFKFEGEDLGYLAEEMFKQQTIQEVTWVLLKAFSFKRE
THHKSSEILQPDVIERKNPFSEETFKLAAEICISNKALNVNHQDNGENVSRACQRPFPQL
LQPWLNGAKVQLGLWLQRVQALSHGNFHMVGPVGAEKSRIEVWKPLPGFQRMYGKAWMSR
QKFAAGVGPS

>gi568815593f:68190729_68397598|GENSCAN_predicted_CDS_2|1113_bp
atgaagcccccaaataaagagcagactcacactcggacaccaacagcgctgcagctcaag
ggattaacggtggaacccggctgcgacccgccggccgtgcccgatccgtgcttgccgtct
ccgacagctagcctgccgccctcgccgctgccgctgcttcctccaactccgctccagctg
ctggcgactcctctccccgcggggatgccccgggcggccgtgccgcgcgctgcctccgct
gcggagtgctctggctctacacgtcccgggcccgcccggctgctgggcgtctcccagcgc
agaggcggaggggttcggggaggtcgaagacaagttcagacctccctggaggctggctgc
gtctctaatccgagtgtctttcagccaaccccaggctttttcgagcccctagcgccccag
cagagtggctggggtggggaggactcggattccagagctcgccaaagcggagaggccctg
caattcctggtctcgccagcactgccttccgagtgggcggaaaacccgcggcacccgcct
ggcgctccgggggtgaaggagggcaaagagattggtggcattttggcccaccctagagat
ttgtggaacttcaaatttgagggggaagatttagggtacctggcagaagaaatgtttaag
cagcaaaccattcaagaggtgacttgggtgctgttaaaagcattcagttttaaaagggaa
acacatcataaaagttcagaaattttgcaacctgatgtgatagaaaggaaaaacccattt
tcagaggagacattcaagctggctgcagaaatttgcataagtaacaaggcactaaatgtt
aatcaccaagataatggggaaaatgtctctagggcttgccagagaccttttccacagctg
ctccaaccgtggctaaatggggccaaggtacagcttgggctgtggcttcagagggtgcaa
gccctaagccatggcaacttccacatggttgggcctgtgggtgcagagaagtcaagaatt
gaggtttggaaacctctgcccggatttcagaggatgtatggaaaggcctggatgtcaagg
cagaagtttgctgcaggggtggggccctcatga

>gi568815593f:68190729_68397598|GENSCAN_predicted_peptide_3|835_aa
MSAEGYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYN
ETTGERGDFPGTYVEYIGRKKISPPTPKPRPPRPLPVAPGSSKTEADVEQQALAPLQLTV
FLFSLGSKELRLHCLLLRLWEQEQRVGACHGTGGPRDRPQHGKAVETHALLSGIATRLLL
PAFQPFAFPQLRQLLASDISDETLTLPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTL
YRTQSSSNLAELRQLLDCGECHRARNANGKDRSWLSVSDTPSVDLEMIDVHVLADAFKRY
LLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFK
LSQTSSKNLLNARVLSEIFSPMLFRFSAASSDNTENLIKVIEILISTEWNERQPAPALPP
KPPKPTTVANNGMNNNMSLQDAEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYT
LTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYPVS
KYQQDQVVKEDNIEAVGKKLHEYNTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEAFNE
TIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQRIMHNYDKLKSRISEIIDSRRRLEEDL
KKQAAEYREIDKRMNSIKPDLIQLRKTRDQYLMWLTQKGVRQKKLNEWLGNENTEDQYSL
VEDDEDLPHHDEKTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKH
CVINKTATGYGFAEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYAQQRR

>gi568815593f:68190729_68397598|GENSCAN_predicted_CDS_3|2508_bp
atgagtgctgaggggtaccagtacagagcgctgtatgattataaaaaggaaagagaagaa
gatattgacttgcacttgggtgacatattgactgtgaataaagggtccttagtagctctt
ggattcagtgatggacaggaagccaggcctgaagaaattggctggttaaatggctataat
gaaaccacaggggaaaggggggactttccgggaacttacgtagaatatattggaaggaaa
aaaatctcgcctcccacaccaaagccccggccacctcggcctcttcctgttgcaccaggt
tcttcgaaaactgaagcagatgttgaacaacaagcacttgctcctctccagctcactgtg
tttcttttctctctggggtctaaggagcttaggcttcactgcctgctcctcagattgtgg
gagcaggagcagagagtgggtgcctgccacgggacagggggtcctagagacaggccccag
catgggaaggcagtggaaacccatgcattgctctctggcattgccacacgtcttctgctg
cctgccttccagccctttgcttttccccagctccgtcagctccttgcctctgacatcagt
gatgaaactttgactctcccggatcttgcagagcagtttgcccctcctgacattgccccg
cctcttcttatcaagctcgtggaagccattgaaaagaaaggtctggaatgttcaactcta
tacagaacacagagctccagcaacctggcagaattacgacagcttcttgattgtggtgag
tgtcacagagctagaaatgcaaatgggaaagacaggtcttggctttctgtttcagataca
ccctccgtggacttggaaatgatcgatgtgcacgttttggctgacgctttcaaacgctat
ctcctggacttaccaaatcctgtcattccagcagccgtttacagtgaaatgatttcttta
gctccagaagtacaaagctccgaagaatatattcagctattgaagaagcttattaggtcg
cctagcatacctcatcagtattggcttacgcttcagtatttgttaaaacatttcttcaag
ctctctcaaacctccagcaaaaatctgttgaatgcaagagtactctctgaaattttcagc
cctatgcttttcagattctcagcagccagctctgataatactgaaaacctcataaaagtt
atagaaattttaatctcaactgaatggaatgaacgacagcctgcaccagcactgcctcct
aaaccaccaaaacctactactgtagccaacaacggtatgaataacaatatgtccttacaa
gatgctgaatggtactggggagatatctcgagggaagaagtgaatgaaaaacttcgagat
acagcagacgggacctttttggtacgagatgcgtctactaaaatgcatggtgattatact
cttacactaaggaaagggggaaataacaaattaatcaaaatatttcatcgagatgggaaa
tatggcttctctgacccattaaccttcagttctgtggttgaattaataaaccactaccgg
aatgaatctctagctcagtataatcccaaattggatgtgaaattactttatccagtatcc
aaataccaacaggatcaagttgtcaaagaagataatattgaagctgtagggaaaaaatta
catgaatataacactcagtttcaagaaaaaagtcgagaatatgatagattatatgaagaa
tatacccgcacatcccaggaaatccaaatgaaaaggacagctattgaagcatttaatgaa
accataaaaatatttgaagaacagtgccagacccaagagcggtacagcaaagaatacata
gaaaagtttaaacgtgaaggcaatgagaaagaaatacaaaggattatgcataattatgat
aagttgaagtctcgaatcagtgaaattattgacagtagaagaagattggaagaagacttg
aagaagcaggcagctgagtatcgagaaattgacaaacgtatgaacagcattaaaccagac
cttatccagctgagaaagacgagagaccaatacttgatgtggttgactcaaaaaggtgtt
cggcaaaagaagttgaacgagtggttgggcaatgaaaacactgaagaccaatattcactg
gtggaagatgatgaagatttgccccatcatgatgagaagacatggaatgttggaagcagc
aaccgaaacaaagctgaaaacctgttgcgagggaagcgagatggcacttttcttgtccgg
gagagcagtaaacagggctgctatgcctgctctgtagtggtggacggcgaagtaaagcat
tgtgtcataaacaaaacagcaactggctatggctttgccgagccctataacttgtacagc
tctctgaaagaactggtgctacattaccaacacacctcccttgtgcagcacaacgactcc
ctcaatgtcacactagcctacccagtatatgcacagcagaggcgatga

>gi568815593f:68190729_68397598|GENSCAN_predicted_peptide_4|67_aa
MGSGWLASAVLLGENATENLQGSFLRHAEVGAAQTVLGNRQDAPRAEFWSQHHRTSFLEQ
YSASATD

>gi568815593f:68190729_68397598|GENSCAN_predicted_CDS_4|204_bp
atgggttcaggctggcttgcttcagctgtcctcctgggagaaaatgctactgagaacttg
cagggcagctttctccggcatgctgaagtgggtgcagcccaaacagtgctaggaaacagg
caagatgcacctcgagcagagttctggagccaacatcacagaacctcctttctagaacaa
tattctgcttctgccacagactaa

>gi568815593f:68190729_68397598|GENSCAN_predicted_peptide_5|81_aa
MTEEEEEEEEEKEEKEEEEEEEEKEKEEEEEEEEEEQEEEEEEEEEEEEEEEEEEEKEEE
EKEKEKRRRKRRNQFPGLLNQ

>gi568815593f:68190729_68397598|GENSCAN_predicted_CDS_5|246_bp
atgacagaagaggaagaagaagaggaggaggagaaagaggagaaggaggaagaggaggag
gaagaggagaaggagaaagaggaagaggaggaagaagaagaggaggagcaagaggaggag
gaagaggaggaagaggaagaagaagaagaagaagaagaagaggaagaaaaagaagaagaa
gagaaggagaaagaaaaaagaagaagaaaaagaagaaatcaattcccagggcttctgaat
cagtag

>gi568815593f:68190729_68397598|GENSCAN_predicted_peptide_6|175_aa
MRGHRRKRKWIVDTSHKSDTQTHRTLPGEGAAPAPTAAQRAPGIAQAAAPEGTSRKLWQL
PHGVKPTELVKAHLSIGPQWRKRQLSSHTDTVNGQGSCQSVMGDRQTLPTVVIKLQGAMM
GISTESMETKGRSVTVDQKICRTRNSTQPDDHLLRENEKALMHSRSEDAEISTAI

>gi568815593f:68190729_68397598|GENSCAN_predicted_CDS_6|528_bp
atgaggggccatagaaggaagaggaaatggattgtggacacctcccataagtcagataca
caaacacacaggactcttccaggagaaggggctgctccagctccaacagcagctcaaagg
gctccaggtatagctcaggctgctgctccagagggcacaagccgtaagctttggcaactt
ccacatggtgttaagcctacagagctggtcaaggctcatctttccattggtcctcagtgg
agaaagaggcagctgtcctcacatacggacaccgttaatggacaaggaagctgtcaatct
gtcatgggagacaggcaaacattgcctactgtcgtgattaaactacaaggtgctatgatg
ggtatcagcactgagtccatggaaaccaaaggaagaagcgtcacagttgaccagaagata
tgcagaacaaggaatagcacacagccagatgatcacttacttagggaaaatgaaaaggcc
ttgatgcattcaagatctgaagatgcagaaataagcactgcaatctga