GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:57:14

Sequence gi568815593r:44204998_44488682 : 283685 bp : 35.46% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   7358   7909  552  1  0   78   39   245 0.681  14.46
 1.02 PlyA +  10934  10939    6                               1.05

 2.00 Prom +  14634  14673   40                              -3.15
 2.01 Init +  34446  34531   86  2  2   52  105    78 0.747   6.24
 2.02 Intr +  52757  52906  150  2  0   82  106    83 0.873   7.86
 2.03 Intr +  57624  57653   30  0  0   91   87    57 0.141   2.23
 2.04 Term +  73530  73728  199  0  1   40   46   143 0.943   1.19
 2.05 PlyA +  73955  73960    6                               1.05

 3.05 PlyA -  76623  76618    6                               1.05
 3.04 Term -  95786  95664  123  2  0   12   48   173 0.707   3.10
 3.03 Intr - 105533 105430  104  0  2   49   89   150 0.946  10.17
 3.02 Intr - 183500 183361  140  1  2  122   98   153 0.925  18.89
 3.01 Init - 183677 183565  113  2  2   73   33   167 0.954   7.44
 3.00 Prom - 211022 210983   40                              -2.45

 4.05 PlyA - 211138 211133    6                               1.05
 4.04 Term - 220567 220483   85  0  1   67   49    86 0.185  -1.25
 4.03 Intr - 238442 238318  125  2  2   40  110    95 0.041   5.36
 4.02 Intr - 247964 247896   69  2  0   70   94    44 0.022   1.66
 4.01 Init - 262892 262842   51  2  0   31   73   200 0.435  12.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:44204998_44488682|GENSCAN_predicted_peptide_1|183_aa
MVPCTPVMAKRGQHRAQSIASEGASPKLWWLTHGVGPAGAQKSRIDVWEPPSRFQRIHGN
AWMARQKFATRVEPSQRMSARALQKRNVELKSPHRVPNGAMLSGAVRRGLLSSRPQGSRS
TNILPHAPEKVADTQLQLIKPVRRGAVLSKTTDVELLKSVGAHLSHQSDLDLRLGIKKII
LEI

>gi568815593r:44204998_44488682|GENSCAN_predicted_CDS_1|552_bp
atggtgccctgcaccccagtcatggctaaaaggggccaacatagagctcagtccattgct
tcagaaggtgccagtcccaagctttggtggcttacacatggtgttgggcctgcaggtgca
cagaagtcaagaattgatgtttgggaacctccatctagatttcagaggattcatggaaat
gcctggatggccaggcagaagtttgctacaagggtggagccctcacaaagaatgtctgct
agggcactgcagaagagaaatgtggaactgaagtccccacacagagttcccaatggggca
atgcttagcggagctgtgaggagagggctattgtcctccagaccccagggtagtagatct
actaacatcttgccccatgcacctgaaaaagtagcagacactcaactccagctcataaaa
ccagtcagaaggggggctgtactctctaaaaccacagacgtggagctgctcaagtctgtg
ggagcccacctttcacatcagtctgacctagatttgagacttggaatcaaaaagatcatt
ttggaaatttaa

>gi568815593r:44204998_44488682|GENSCAN_predicted_peptide_2|154_aa
MKCGHPEKKNGITAIVQGIREITLNSDRRLVGSAEKHNPVLTGDFFERVSAAFIWGIENK
GNRTYAKGPHFPLRVINVKRCVLRLLPRFNSVSINNVLDYSNPNCSKKSFQAHWIKLTLP
LWLAATFTVQDMVSDCSVATEFVAIVATVFHPLS

>gi568815593r:44204998_44488682|GENSCAN_predicted_CDS_2|465_bp
atgaaatgtgggcaccctgaaaaaaagaacgggataacagcaattgttcagggaataaga
gagataaccttaaactctgaccgccgattggtgggttcagctgaaaagcataatcctgtc
ctcactggagacttttttgaaagggtttctgctgcatttatatgggggattgaaaataag
ggaaatcgaacatatgccaagggaccacattttcccttaagggtaataaatgtaaagagg
tgcgtgcttcgccttctgccacgattcaattctgtaagtatcaataatgtacttgactat
tcgaatcccaattgctccaagaagtctttccaagctcactggatcaaattaactctccct
ctttggcttgctgccacattcacagtccaggatatggtcagcgactgttcagtagcaaca
gagtttgttgctattgttgctactgtgttccacccactgtcctaa

>gi568815593r:44204998_44488682|GENSCAN_predicted_peptide_3|159_aa
MDTDTLCLSLSPPARLLLLLLFVAVLGVFRPCHLPSPCAGRHVRSYNHLQGDVRWRKLFS
FTKYFLKIEKNGKVSGTKKENCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGKLYGSR
GKVKILAAHTTATSEEEYTKETAVLQVQKPNGCLLHLIK

>gi568815593r:44204998_44488682|GENSCAN_predicted_CDS_3|480_bp
atggatactgacacattgtgcctcagcctttccccacctgcccggctgctgctgctgctg
ctttttgttgctgttcttggtgtcttccgtccctgtcacctgccaagcccttgcgcggga
aggcatgtgcggagctacaatcaccttcaaggagatgtccgctggagaaagctattctct
ttcaccaagtactttctcaagattgagaagaacgggaaggtcagcgggaccaagaaggag
aactgcccgtacagcatcctggagataacatcagtagaaatcggagttgttgccgtcaaa
gccattaacagcaactattacttagccatgaacaagaaggggaaactctatggctcaaga
ggcaaggtgaagattttggcagcccacacaaccgcaactagtgaagaagagtacaccaag
gagacagcagtgctgcaggtgcaaaaaccaaatggttgtttgctacatcttattaaatga

>gi568815593r:44204998_44488682|GENSCAN_predicted_peptide_4|109_aa
MNSAVMLLLLLLLLLAYDNITALETMNGILGQLTKSQPRKITALREKECMSCVVQTTREE
EAVGGLTSLGKGMHYLMHESYRYCPLSTSDKQPNPGRSDQESKALEIIS

>gi568815593r:44204998_44488682|GENSCAN_predicted_CDS_4|330_bp
atgaactctgctgtgatgctgctgctgctgctgctgctgctgctggcatatgataacatc
accgctttggagacaatgaatgggatcctgggacaactgacaaaaagccagccaagaaag
ataactgccttaagggagaaagaatgcatgagctgtgtggtccagactaccagagaagaa
gaggctgtgggaggacttacaagtctggggaaaggaatgcattatctgatgcatgagagt
tacaggtactgccctttaagcaccagtgacaagcagcccaatccagggagaagtgaccaa
gagagcaaagcacttgaaatcatttcttaa