GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:10:40

Sequence gi568815593r:9529136_9730032 : 200897 bp : 40.51% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5388   5495  108  2  0  101  -32   119 0.045   1.47
 1.02 Intr +   5958   6041   84  2  0   67   80    67 0.122   2.90
 1.03 Intr +   7678   7764   87  0  0   91   40    75 0.063   2.25
 1.04 Intr +  14989  15055   67  0  1   66  111    37 0.312   1.36
 1.05 Intr +  15461  15609  149  0  2   63   51   107 0.410   3.53
 1.06 Intr +  16195  16398  204  0  0   71   37   186 0.842  10.27
 1.07 Intr +  16576  16805  230  0  2   59   44   145 0.470   2.94
 1.08 Term +  20881  21100  220  1  1   49   38   191 0.583   5.73
 1.09 PlyA +  23241  23246    6                               1.05

 2.00 Prom +  23784  23823   40                             -11.84
 2.01 Sngl +  24098  24547  450  1  0   81   51   249 0.991  16.40
 2.02 PlyA +  25957  25962    6                               1.05

 3.00 Prom +  29569  29608   40                              -4.35
 3.01 Init +  36434  36618  185  1  2   78   75    65 0.351   2.84
 3.02 Term +  38683  38869  187  1  1   94   33   128 0.828   3.88
 3.03 PlyA +  39432  39437    6                               1.05

 4.03 PlyA -  39730  39725    6                               1.05
 4.02 Term -  51445  51299  147  1  0   96   49    84 0.424   2.22
 4.01 Init -  53877  53803   75  0  0   91   60    74 0.386   4.30
 4.00 Prom -  55519  55480   40                              -3.65

 5.03 PlyA -  55813  55808    6                              -0.45
 5.02 Term -  56836  55849  988  0  1    6   47   293 0.523   7.55
 5.01 Init -  58110  57038 1073  0  2   39  110   314 0.285  22.57
 5.00 Prom -  62810  62771   40                              -7.55

 6.00 Prom +  73834  73873   40                              -8.15
 6.01 Init +  74958  75014   57  2  0   80   31    75 0.242   2.37
 6.02 Intr +  76070  76260  191  1  2   15   37   174 0.182   2.46
 6.03 Intr +  83513  83602   90  2  0   18   85    92 0.141   0.09
 6.04 Intr +  84209  84341  133  2  1   84   88    77 0.399   7.03
 6.05 Intr +  94172  94278  107  1  2   90   38    81 0.016   1.39
 6.06 Intr + 100663 100882  220  1  1   30   78   200 0.696  10.58
 6.07 Term + 109013 109105   93  1  0  124   40    49 0.089   0.55
 6.08 PlyA + 111232 111237    6                               1.05

 7.00 Prom + 113354 113393   40                              -6.55
 7.01 Init + 115346 115459  114  1  0   75  115    46 0.900   6.26
 7.02 Intr + 116391 116474   84  2  0  111   64    52 0.653   4.20
 7.03 Term + 122696 122827  132  1  0   80   34    92 0.535   0.11
 7.04 PlyA + 123550 123555    6                               1.05

 8.05 PlyA - 125229 125224    6                               1.05
 8.04 Term - 136144 135938  207  1  0   50   48   155 0.346   4.06
 8.03 Intr - 138455 138256  200  0  2   78   68   168 0.404  11.95
 8.02 Intr - 144751 144637  115  1  1   72   67    28 0.355  -1.80
 8.01 Init - 145420 145394   27  1  0   39  116    40 0.372   1.55
 8.00 Prom - 149193 149154   40                              -3.25

 9.00 Prom + 150009 150048   40                              -3.55
 9.01 Sngl + 166383 166583  201  2  0   57   50   166 0.760   4.63
 9.02 PlyA + 166814 166819    6                               1.05

10.02 PlyA - 169008 169003    6                               1.05
10.01 Sngl - 171708 171547  162  0  0   75   38   198 0.631   7.85
10.00 Prom - 176188 176149   40                              -4.25

11.06 PlyA - 177000 176995    6                               1.05
11.05 Term - 178080 178064   17  1  2  101   55     7 0.149  -3.88
11.04 Intr - 181289 181097  193  2  1   18   70   156 0.241   4.94
11.03 Intr - 193057 192929  129  1  0   53   71    74 0.038   2.17
11.02 Intr - 194833 194628  206  2  2   71   57    78 0.028   1.00
11.01 Init - 196451 196376   76  2  1   88   82    88 0.402   7.77

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  64373  64451   79  2  1   90   53    77 0.830   3.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_1|382_aa
MEPTLRGKPASVASPWNIMVPESGPDPDPKREFLHLLHPEDPRCESLRAFLCSKTNLREL
ETPQAQASMKFLFTDTGKDILILNFRTVTGGQETTSIINNISADSKLSHYDRALLGPSNC
LWRLVLRALARSAPCRESRGRRRRRKVKSQLRPRHPGTKQAKGEETSAQAGTQTSSPCTS
STVGAPGLTVVLILYAQPPPRCLLMDPTRDRHHPPADRCSPRVPASGAARRGASRPLLAE
FQNGGTGLGATSTVPERAANRWVGRFAPSRDDPRGGKVGCPSQLRGAVLGGRRERPGMSD
TGRAAPARGRQTLLIFELSGTHFSRENHIPPPHSQVQGSSLAKAMTQGYQKQSTHLRRCA
DSQEQLTLLKKSLLILLSVRAF

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_1|1149_bp
atggagcccactctgaggggcaagccagccagtgttgcatccccatggaacatcatggta
ccagaaagcggtcccgatccagaccccaagagagagttcttgcacctccttcatcctgaa
gatcctcgctgtgaatccttaagggctttcctatgcagcaagacaaacctcagggagctg
gaaactccgcaggctcaagcttcaatgaagtttctcttcactgacactggcaaagatatt
ctgattttaaacttcagaacagtgacaggaggacaggagactacctctataattaataac
atatctgctgattccaaactcagccattatgacagagctcttctcggacccagcaactgc
ctgtggcgcctcgtcctccgagcgctcgctcgcagcgccccctgccgggaatcccgagga
cgccgcaggcgcaggaaagttaaatcccaactccggccgcggcatcctggtacaaagcaa
gcaaagggcgaggagacctcggcacaggcgggtacacaaacttccagcccgtgcactagc
tcaactgtgggcgcccccggactgacggtcgtcctaatcctgtacgcgcaacccccgccc
aggtgcctgctgatggatcccacccgagatcggcaccacccaccagccgaccgctgcagt
ccccgggtcccggccagcggcgcggcgcggcgcggcgcgagccgccccctactcgctgag
ttccagaatgggggcaccggcttgggggccacgagcacggtccccgagcgcgcggccaac
cggtgggtgggcaggttcgcgcccagcagagacgaccctcgaggtggcaaagttgggtgt
ccaagccagctccgcggggcagtcctgggtgggagaagggagcgtcccgggatgagcgac
actggccgggccgcccctgcacggggaaggcaaactctgctcatcttcgagctctctgga
acccatttctcaagggagaaccacattcccccacctcacagccaagttcaaggaagcagc
ctggctaaagcaatgactcaaggataccagaagcagagcacgcatttaagaagatgcgct
gactcgcaggagcagctgactcttcttaagaagagtttactgattcttctttcagtacgg
gccttttaa

>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_2|149_aa
MALLGTAHAVALTSWSPVPVALLGWHCTLVALPVWDLRGNPDPTALLIIVLVGTVCTYLT
FVAVFCLGSGLSKTSFEIYVETAMPPQLIHSIYMQSWHFKNVIKAYYLYLSEGWPRPHLS
PLEPQLGQLKSTVLECGEQRSEEALGSET

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_2|450_bp
atggctttgctgggcacagcccatgctgtagctctcacaagttggagtccagtgcctgtg
gctctcctaggctggcattgcacgctggtggctctaccagtttgggatctcagaggcaac
cctgaccccacagctctgctgatcattgtcctagtagggaccgtctgcacctatctcacc
tttgtggcagttttctgtctgggctctgggctctccaagacatcttttgaaatctacgtg
gagacagccatgcctccacagctcatacactctatatacatgcagagttggcacttcaag
aatgtcatcaaggcttattacttgtacctttcagaagggtggcccaggccacatctgagt
ccacttgagccccagctggggcagctaaaaagcactgtgttagaatgcggggagcaaaga
tctgaggaggccctaggcagtgaaacctga

>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_3|123_aa
MAEFMGLAPLFFHPRDDSFSVDFLRVFLTVGGSSVASQYCVLTVDRGKWEPALDAQRKAD
SRVLLPLFLMHRSGEKLKRRKAPSSHSELLQPGLAPHSCCQRGSPETQLAFAWRPPFMVG
TFP

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_3|372_bp
atggcagagtttatgggattggcaccactctttttccacccaagagacgatagtttttct
gttgacttcctcagggtattcttgactgttggtggcagcagtgtggcttcccaatactgt
gtcttgacagtagacaggggcaagtgggagccagcgctagacgcgcagaggaaggcagac
agcagagttttactcccattgtttctgatgcacagatctggagagaagctcaagagaagg
aaggctccctcttcccactctgagctcctacaaccagggctggcccctcacagctgctgc
caaagaggatctccagagacccagttggcttttgcttggaggcccccatttatggttggg
acgttcccttag

>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_4|73_aa
MAAMAGALTSCLDTEVTRHILGTEATSKYSGEKASGFWKRQGYKIENFSPRGEVLKSVHF
KEEEDTGPMTSAG

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_4|222_bp
atggctgcgatggctggagctctgacatcctgcctggacactgaggtcacgagacacatt
ctgggaacagaagcgacttccaaatattcaggagaaaaggcatctggtttctggaaaagg
cagggctataaaatagaaaacttctcaccaagaggggaagttttaaaatcagtacatttc
aaagaagaggaggacacagggccaatgaccagtgcaggatga

>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_5|686_aa
MQKNYLCRHSKASRRQEITKIRAELKEKETQKTLQKINEPRSWFFERINKIDRPLARLIK
KKREKNQIDAIKNDKGDITTDPTEIQTIIREYYKHLYANKLENLEEMDKFLDTYTLPRLN
QEEVESLNRPTTGSEIVAIINSLPTKKSPGPDGLTAEFYQRYKEELVPFLLKLFQSIEKE
GILPNSFYEASIILIPKPGKDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHD
QVGFIPGIQGWFNIRKSINVIQHINRTKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGI
DGTYLKIIRAIYDKPTANIIRNGQKLEAFPLKTGTRQGCPLSPLPFNIVLEVLARAIRQT
ESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGR
INIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARITKSILSQKNKAGG
ITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKD
SLFNKWYWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIG
MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL
ISRIYNELKQIYKKKQTTPSKSGRRT

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_5|2061_bp
atgcagaagaattacctgtgtaggcattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaaaagagacacaaaaaacccttcaaaaaattaatgaaccc
aggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaag
aaaaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggggatatcaccacg
gatcccacagaaatacaaactatcatcagagaatactacaaacacctctacgcaaataaa
ctagaaaatctagaagaaatggataaattccttgacacatacactctcccaagactaaac
caggaagaagttgaatctctgaatagaccaacaacaggatctgaaattgtggcaataatc
aatagcttaccaaccaaaaagagtccaggaccagatggattgacagccgaattctaccag
aggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaagag
ggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagccgggcaaa
gacacaaccaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatc
ctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccatcatgat
caagtgggcttcatccctgggatacaaggctggttcaatatacgcaaatcaataaatgta
atccagcatataaacagaaccaaagacaaaaaccacatgattatctcaatagatgcagaa
aaggcctttgacaaaattcaacagcccttcatgctaaaaactctcaataaattaggtatt
gatgggacgtatctcaaaataataagagctatctatgacaaacccacagccaatatcata
cggaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccct
ctctcaccactcccattcaacatagtgttggaagttctggccagggcaatcagacaaaca
gagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaataccta
ggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctc
aatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaaga
atcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatcccc
atcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcatatgg
aaccaaaaaagagcccgcatcaccaagtcaatcctaagccaaaagaacaaagctggaggc
atcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtac
tggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataacaccg
catatctacaactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggat
tccctatttaataaatggtactgggaaaactggctagccatatgtagaaagctgaaactg
gatcccttccttacaccttatacaaaaatcaattcaagatggattaaagacttaaacgtt
agacctaaaaccataaaaaccctagaagaaaacctaggcattaccattcaggacataggc
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactcaagagcttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacctacaaaatgggagaaaattttcgcaacctactcatctgacaaagggcta
atatccagaatctacaatgaacttaaacaaatttacaagaaaaaacaaacaaccccatca
aaaagtgggcgaaggacatga

>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_6|296_aa
MSRDTYAGPALMVILAGLWDSNTKTKCKDPDVTIRVASSSNKNIGESGTGIEGDDIKETD
SGWTCAALYGTPTLHGMEFHPSLNTKGSPSGRNEETLGSNLDSREEIKERQLRLLSCSYL
LQGWLPLSSGFTITRMKLTVGDFLQRFRDVADSVTGQPVPNRSCSCRSVNSNRAAEQPQP
VHDTSENEPVSWRTHDEFYEEDNNHINVEDEQLQKNSRNCQTRKKEIQRSHFSVLDQVNA
IHHHNDAICENPKKKLYHCKKKIDNEGWGFLTAGLTAVIVVALLGLATQQGYQALG

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_6|891_bp
atgtccagagacacttacgcgggtcctgcattgatggtcatccttgcaggtctatgggac
tctaatacaaagactaagtgcaaagatcctgatgtcacaatcagagttgcaagttccagc
aacaagaacattggtgaatctgggacgggtattgaaggagatgatatcaaagagacagac
agtggctggacatgtgcagctctgtatgggactcccacccttcatgggatggaattccac
ccttcattaaatactaaaggaagtccttcaggcagaaatgaagaaacactaggcagtaac
ttggattcacgtgaagaaataaaagagcgacagttaaggctcttgagctgttcctacctg
ctccagggttggctcccactcagtagtgggtttaccataacaagaatgaagcttacagta
ggagacttccttcagagattcagggatgtggcagattcagtcactggccagcctgttcca
aacaggagctgctcctgcaggagtgtgaacagtaacagggctgctgaacagccacagcca
gtgcacgacacaagtgagaatgaacctgtgtcttggagaacacatgatgaattctatgaa
gaagataacaatcacattaacgtagaagatgaacaactgcagaaaaattctagaaactgc
cagacaagaaagaaggagatccagcggagccatttttctgtgcttgatcaagtcaatgcc
attcaccaccacaatgatgccatttgtgaaaatcccaagaagaaattgtatcactgcaag
aagaaaatagataatgagggatggggcttcctgacagctggactgactgcagtgattgtt
gttgctcttctgggtttagccacccagcaaggctaccaagctctgggctga

>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_7|109_aa
MEPFFKKEKVEGRLKSRALCGHAPETATAGRDDIMSWMEPLSSTLVYGPYLGLTPSLNPG
VVTETQCQASEMGKSSSAHQQALSGWASISPSVPVAHITVPFIMSMNLI

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_7|330_bp
atggagccatttttcaagaaggagaaggttgaaggaaggttaaaatcaagagctctgtgt
ggacatgctcctgagacggctactgcaggtagagatgatattatgtcatggatggaacca
ctctcctccacccttgtttatgggccttacttggggctgactccatcactgaatccagga
gtagtcacagaaacccagtgccaagcatctgagatgggaaagtcatcttcagcccaccaa
caagccctgagcggctgggcgtccatctccccatctgtaccagtggcacacatcactgtt
ccattcatcatgtctatgaacttgatctga

>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_8|182_aa
MDDEQKHGKGMSFAGPGEQPQLFQSHSIRQGMEKCHKGQQEEFRLCTGAKAGRQAISFPG
QPKSTVQVGIRGTYGYACLQNSDKSEATGQEALAGVAHLATRSKVDRVARPAIQEQEPLK
AERGSQREPRHEQGLICHGLLTDGGHVSKNGTSVLPLLNSANNKEEPGSGSSRKECGPAD
TL

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_8|549_bp
atggatgatgaacagaagcatggaaaggggatgagctttgctgggcctggggagcagcct
cagttgtttcagagccattccattagacagggtatggagaagtgccacaagggacagcaa
gaagaatttcgtttgtgcacaggggccaaagctggcagacaggctatatcctttccaggt
caacccaaatctactgtccaagtggggataaggggaacatacggttatgcctgcctgcag
aattcagacaaaagtgaggccactgggcaggaagctctagcaggtgtggcccatctggct
acaagaagtaaggtggatagagttgcccgtcctgcaatccaggagcaggagcccttaaaa
gcagagagaggaagccagagagaaccaaggcatgagcagggcttgatatgtcatggcttg
ctcacagatggaggtcatgtgtcaaagaatgggacctcagttctaccactgttgaattct
gccaacaacaaggaggagcctggaagtggatcttccagaaaagaatgtggcccagctgac
accttgtaa

>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_9|66_aa
MLHFEDLKMDKPFSDHLKSGLGALGVGVWLHRVQRPKLGELPGLHDSTPEDGLWKEKDHN
QTLRKY

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_9|201_bp
atgctgcattttgaagatctgaagatggacaaacctttctctgatcatttaaaaagcggc
ttgggtgcactgggggtgggagtatggctgcatagagtccagagacccaaacttggagaa
ttgccaggtctccacgactctacccctgaggatggcctctggaaggaaaaagaccacaac
caaacactgagaaagtactag

>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_10|53_aa
MTGILIRRGDEDRDMHRKKPHEDREKTVIYRPRRESTEKTEKTDPADTLILGF

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_10|162_bp
atgaccggcatcctgataagaagaggagatgaggacagagacatgcacagaaagaagcca
catgaagacagagagaagacggtcatctacaggccaaggagagagtccacagagaaaaca
gagaaaactgatcctgctgacaccttgatcttgggtttctag

>gi568815593r:9529136_9730032|GENSCAN_predicted_peptide_11|206_aa
MAGCRSRALPRGEAAKAWREIERSAGHRSQGHPKGTMRKNKERALCLISVTLGPMSKRYS
FLPGSSAKLLPGLREQRAAGSLVPGSTTGHHASQRFLLGCWIEGLRSLPAVGQRPSSSSV
PLPLGLQNGSLLHQSEQGSKSGNYDMSSLLLGELEWRALNELESILFVKETANPLAQALG
EWRALDKLESILFVKETANPLTPPPA

>gi568815593r:9529136_9730032|GENSCAN_predicted_CDS_11|621_bp
atggcgggctgcaggtcccgagccctgccccgtggggaggcagctaaggcctggcgagaa
atcgagcgcagcgccggtcataggtcacagggtcatcccaaaggaacaatgaggaagaac
aaagaaagagccctctgccttatttcggtgacattgggaccaatgtccaagcgctactcc
tttctccctggatccagtgcaaagctcctcccaggactaagagagcaaagagcagctggg
agccttgtgcccggcagcacaactggtcatcatgccagccagcggttcctcctgggctgt
tggattgagggcctcaggtccttaccagctgttggccagagaccatcatcatcatcagtt
cctttacccttaggtttacaaaatggcagcttgctccatcagagtgagcaaggatcaaaa
agtggcaactatgacatgtcctcactactattgggggaattagagtggagggcactcaat
gaattggagagcatactctttgtaaaggagacagccaatcctctggcccaggccttgggt
gagtggagggcactcgataagttggagagcatactctttgtaaaggagacagccaatcct
ctcactccaccaccagcctga