GENSCAN 1.0	Date run:  7-Nov-116	Time: 19:49:59

Sequence gi568815594f:158580466_158808524 : 228059 bp : 39.26% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6608   6707  100  1  1   42   70   100 0.269   4.07
 1.02 Intr +  12936  13034   99  1  0   91   81    36 0.270   2.36
 1.03 Intr +  18861  18966  106  1  1   64  101    72 0.141   4.45
 1.04 Intr +  27507  27578   72  0  0   73   93    61 0.073   2.70
 1.05 Intr +  52940  53011   72  2  0   81   50    91 0.327   2.20
 1.06 Intr +  64444  64673  230  1  2   75   68   131 0.694   6.39
 1.07 Intr +  66605  66736  132  0  0   53   91    44 0.281   0.90
 1.08 Intr +  71292  71441  150  1  0  112   77    27 0.716   3.21
 1.09 Intr +  76904  77086  183  0  0   71   55   100 0.220   3.84
 1.10 Intr +  77805  77958  154  1  1  -10   81   133 0.313   1.01
 1.11 Intr +  78199  78360  162  1  0   46   52   134 0.322   3.77
 1.12 Intr +  79583  79742  160  2  1   34   23   128 0.018  -0.03
 1.13 Intr +  80757  80896  140  2  2   45   68   130 0.226   5.04
 1.14 Intr +  81181  82175  995  1  2   65   69   584 0.376  43.74
 1.15 Intr +  84039  84290  252  1  0   95   -6   235 0.853  11.28
 1.16 Intr +  84409  84591  183  2  0   71   80    88 0.208   5.14
 1.17 Intr +  87495  87545   51  1  0   68   92    49 0.021   1.26
 1.18 Term +  91031  91521  491  0  2   32   47   338 0.014  17.93
 1.19 PlyA +  94582  94587    6                               1.05

 2.00 Prom +  97934  97973   40                              -6.45
 2.01 Init + 101738 101959  222  1  0   85   43   303 0.909  24.10
 2.02 Intr + 104127 104213   87  2  0  107   75    41 0.541   3.95
 2.03 Intr + 109883 109960   78  1  0  100   92    79 0.951   8.33
 2.04 Intr + 112840 112944  105  0  0   86  119   -19 0.580   0.49
 2.05 Intr + 115032 115178  147  2  0   95   53   106 0.994   7.31
 2.06 Intr + 117094 117234  141  0  0  107  103    79 0.994  10.93
 2.07 Intr + 118522 118665  144  0  0   17   93    83 0.693   1.26
 2.08 Intr + 122958 123126  169  2  1   68   82    57 0.818   1.70
 2.09 Intr + 126164 126385  222  0  0   16   90   133 0.900   3.48
 2.10 Term + 127899 128062  164  1  2   75   37   219 0.999  12.62
 2.11 PlyA + 128183 128188    6                               1.05

 3.10 PlyA - 128399 128394    6                               1.05
 3.09 Term - 129359 129271   89  0  2   86   43    66 0.850  -1.26
 3.08 Intr - 130205 130163   43  2  1   65  115    47 0.782   1.99
 3.07 Intr - 132854 132654  201  2  0    9  107   109 0.836   3.46
 3.06 Intr - 135219 135097  123  0  0   12   76   151 0.954   6.16
 3.05 Intr - 136735 136547  189  1  0   70  106   160 0.987  14.86
 3.04 Intr - 138821 138715  107  0  2   82   98    92 0.995   8.61
 3.03 Intr - 141018 140878  141  1  0   83   47   103 0.364   5.10
 3.02 Intr - 142801 142739   63  2  0   18   83   103 0.079   0.57
 3.01 Init - 148772 148634  139  2  1   82   95   102 0.586  10.66
 3.00 Prom - 150473 150434   40                              -4.55

 4.00 Prom + 156295 156334   40                              -5.75
 4.01 Init + 159118 159244  127  0  1   29   35   145 0.522   3.67
 4.02 Intr + 162195 162313  119  1  2   76   37    78 0.005   0.76
 4.03 Intr + 186295 186336   42  0  0   89   96    31 0.000   1.52
 4.04 Intr + 188079 188246  168  2  0   33  -12   217 0.000   5.42
 4.05 Intr + 188718 188854  137  2  2   -1   66   171 0.000   4.45
 4.06 Intr + 215445 215559  115  0  1   46   75   129 0.322   6.93
 4.07 Intr + 222204 222348  145  2  1   60   31   112 0.072   1.63
 4.08 Term + 225689 225849  161  0  2   49   48   123 0.262   1.52
 4.09 PlyA + 226551 226556    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  82839  82914   76  2  1  101  100    40 0.823   7.80
S.002 Term -  89303  89148  156  2  0   90   34   172 0.947   8.95


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:158580466_158808524|GENSCAN_predicted_peptide_1|1243_aa
MLSLHLISITDPEVGGCGSNRNMNVVHRVKRGPGDNNGWSLQFDKYFASYYKMTSQYPFE
AETPECLVGSVPVQCLCQGLELDCDETNLRAVPSVSSNVTAMYLQNNKITSISIYAFRGL
NSLTKLDLGSNKIENLPPLIFKDLKELSQLYFKKFQYCGYAPHVRSCKPNTDGISSLENL
LASIIQRVFVWVVSAVTCFGNIFVICMRPYIRSENKLYAMSIISLCLAFIPLSNKEFFKN
YYGTNGVCFPLHSEDTESIGAQIYSVAIFLGTITSWVVIFILPINSALNPILYTLTTRPF
KEMIHRFWYNYRQRKSMDSKASVSTLAALEEPFSPPMRSRGPSLGLAEARAGSLCSQGGV
EGEMREGAGAACSACGTSWVLDTPSLRTVTLTASVCDFILEVSETKNPPIPDTFWRPRGD
YRLSSSGETIVKRVGSIGLPGTSFRFSCTSGLSRASTERKAIQLRGADNKLVDPAAMSGT
LKGMSPNLPVAPLTINDNPPLISPAQKEISKEISKGPQIPPDHQLCPLQAVGGGEFGPTW
VCLTIEGQEIDFLLDIGMAFSVLISCPGRLSSRSVTIRGILGQPVTRQYPLRPEAHKGLQ
DIIKHLKAQGLLRKCGSPCNTPILGVQKPNGQWRLVQDLRLINEAVIPLYPVVPNPYTLL
SQITEEAEWFTVLDLKDAFFCIPLHSDSQFLFAFQDPTDHTSQLTWTVLPKGFRDSSHLF
GQALAQDVGHFSSPGTLVLQYVDDLLLAVSLEASCQQATLDLLNFLANQGYKVSRSKAQL
CLQQVKYLGLILARGTRALSKEQIQPILAYPHPKTLKQLQGFLGITGFWRLWIPGYSEIA
GPLYTIIKETQRANTHLVEWEPGAETAFKTLKQAIVQAPALSLPTGQNFSLYITERAGIA
LGVLTQTRGTTPQPVAYLSPVAAMLLLLAFGPCIFNLLVKFVSSRIEAIKLQMVLQMEPQ
MSSTNNFYRGPLDRPAGPSTGLKSSPLEDTTAGPLLRPYPAGTSVSTLDALEEPFSLPLH
CGGPSLGLAEAGAGSLCSRGGVEGEAWVGAGAVHGACGPAWVPVVTSGDSGEGGTGQDQT
EGPVVPGHGGWGTDSLASRAPPPPVFPEAPRGDAVPTPHSRLRSAAPLPPAGPPLGRCSC
SELASPNSLGRPGKMLQRRLKRREKREAAGAAKKPATPQGRPWGRVGTAESDPRSRTDTN
CLLTTRAQSRKAPPPNARNPAQSPRGSQPRTTKTFHFSGQPII

>gi568815594f:158580466_158808524|GENSCAN_predicted_CDS_1|3732_bp
atgctgtcacttcacctaatttccatcactgatcctgaggtaggtggatgtggcagtaac
aggaacatgaacgtggtgcacagagtgaagcgaggccctggagacaacaatggatggtct
ctgcaatttgacaaatattttgccagttactacaaaatgacttcccaatatccttttgag
gcagaaacacctgaatgtttggtcggttctgtgccagtgcaatgtctttgccaaggtctg
gagcttgactgtgatgaaaccaatttacgagctgttccatcggtttcttcaaatgtgact
gcaatgtacctgcaaaacaataagattacatccatctccatctatgctttcagaggactg
aatagccttactaaactggatttaggaagtaataagattgaaaatcttccaccgcttata
ttcaaggacctgaaggagctgtcacaattatattttaagaaattccagtactgtgggtat
gcaccacatgttcgcagctgtaaaccaaacactgatggaatttcatctctagagaatctc
ttggcaagcattattcagagagtatttgtctgggttgtatctgcagttacctgctttgga
aacatttttgtcatttgcatgcgaccttatatcaggtctgagaacaagctgtatgccatg
tcaatcatttctctctgcttggctttcattccattgagcaataaggaatttttcaaaaac
tactatggcaccaatggagtatgcttccctcttcattcagaagatacagaaagtattgga
gcccagatttattcagtggcaatttttcttggtaccataacctcttgggtagtgattttt
attctgcccattaacagtgctttgaacccaattctctatactctgaccacaagaccattt
aaagaaatgattcatcggttttggtataactacagacaaagaaaatctatggacagcaaa
gcctcagtgtccactctggctgcactggaggagcccttcagcccgccaatgcgcagtagg
ggcccctctctggggctggctgaggccagagctggctccctctgctcgcagggaggtgtg
gagggagagatgcgggagggagctggggctgcatgcagtgcttgtgggacgtcgtgggtt
ctggacacaccatctttaagaactgtaacactcactgcgagtgtctgcgacttcattctt
gaagtcagcgagacaaagaacccaccaattccggacacattttggcgaccacgaggggac
tatcgcctatcgtcaagtggtgagactatcgtcaagcgagttgggagcattggtttgcct
ggaaccagcttccgcttttcctgtacttctgggctgagccgagcatcgacagagaggaaa
gccattcagctccggggtgccgacaacaagttggttgacccagcagccatgagcggaact
ctcaaaggcatgtcgcccaacctccctgtagctccccttactattaatgataatcctcct
ctaatctcccctgctcagaaagaaataagcaaagaaatctccaaaggaccacaaatcccc
ccggaccatcagttatgtccccttcaagctgtagggggaggggaatttggcccaacctgg
gtatgtttaaccattgagggccaggaaattgacttcctcctggacattggcatggccttc
tcagtgttaatctcctgtcctggacgactgtcctcaaggtctgttaccatccgaggaatc
ctgggacagcctgtaaccaggcaatatcccttaaggcctgaagctcataaaggtttacag
gatattattaaacatttaaaagctcaaggcttactaaggaaatgtggcagtccctgcaac
accccaattctaggagtacaaaaaccaaacggtcagtggagactagtgcaagatcttaga
ctcatcaatgaggcagtaattcctctatatccagttgtacccaacccctataccttgctc
tctcaaataacagaggaagcagaatggttcactgttctggacctcaaggatgccttcttc
tgtattcccctgcactctgactcccagtttctctttgccttccaggatcccacagaccac
acatcccaacttacgtggacagtcttgcccaaagggtttagggatagctctcatctattt
ggtcaggcactggcccaagatgtaggtcacttctcaagtccaggcactctggtccttcag
tatgtggatgatttacttttggctgtcagtttggaagcctcatgccagcaggctactcta
gatctcttgaactttctagctaatcaagggtacaaggtgtctaggtcgaaggcccagctt
tgcctacagcaggtcaaatatctgggcctaatcttagccagagggaccagggccctcagc
aaggaacaaatacagcctatactggcttatcctcaccctaagacattaaaacagttgcag
gggttccttggaatcaccggcttttggcgactatggatccccggatacagcgagatagct
gggcccctctatactataatcaaggagacccagagggcaaatactcatctagtagaatgg
gaaccaggggcagaaacagccttcaaaaccttaaagcaggctatagtacaagctccagct
ttaagccttcccacaggacaaaacttttctttatacatcacagagagagcagggatagct
cttggagtccttactcagactcgtgggacaaccccacaaccagtggcctacctaagtccc
gtggcagccatgttgctgttactcgcctttggaccctgtatttttaaccttcttgtcaaa
tttgtttcctctagaatcgaggccatcaagctacagatggtcttacaaatggaaccccaa
atgagctcaactaacaacttctaccgaggacccctggaccgacctgctggcccttccact
ggcctaaagagttcccctctggaggacacaactgcagggccacttcttcgcccctatcca
gcaggaacctcggtgtccactctggatgcactggaggagcccttcagcctgccgctgcac
tgtgggggcccctctctggggctggccgaggccggagccggctccctctgttcacgggga
ggtgtggagggagaggcatgggtgggagctggggctgtgcacggtgcttgcgggccggcg
tgggttccagtggttacctctggggactctggggagggaggaacgggacaggatcaaaca
gaagggccggtcgtcccgggtcatgggggttgggggaccgattccctagcctcgcgagcc
ccgccgccgccggtcttcccagaggcgccgaggggggacgcggtcccgacaccacactca
cgtctccgatctgcagctccacttcctccagctggtccaccgttgggccgctgctcctgc
tcggaactggccagcccaaactcactgggccgcccggggaagatgctgcagaggcgtctg
aagaggagggagaagagggaggcggcgggggcggcgaagaaacctgcaactcctcagggt
cggccatggggaagggttgggaccgcggaatccgacccgagaagccgaaccgacaccaac
tgtcttttaaccactcgcgcccaaagccgaaaggccccgcctcctaacgccagaaatccc
gcccagtctcctcgtgggtctcagccccggaccacaaagacgtttcatttttcgggacag
ccaatcatatga

>gi568815594f:158580466_158808524|GENSCAN_predicted_peptide_2|492_aa
MERFAEEADVVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAAQIGAHTLSGACLDP
GAFKELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGKVLFHDDGSVKGIATNDV
GIQKDGAPKPSLGSYLQYASYHKNSDLDIFKLQRLSNLAGVRHLATFERGLELHAKVTIF
AEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKNWKPGRVDHTVGWPLDRHTY
GGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGAR
ALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAESIFNQLTSENLQ
SKTIGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIP
VNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVV
PEGGGGPAYNGM

>gi568815594f:158580466_158808524|GENSCAN_predicted_CDS_2|1479_bp
atggaaaggtttgcagaagaagcagatgttgtaatagttggtgcaggccctgcagggctc
tctgcagctgttcgtctaaaacagttggctgtggcacatgaaaaggacatccgtgtgtgt
ctagtggagaaagctgcccagataggagctcatactctctcaggggcttgccttgatcca
ggtgcttttaaagaactcttcccagactggaaagagaagggggctccacttaacactcct
gtaacagaagacagatttggaattttaacagagaaatacagaattcctgtgccaattctt
ccaggtaaggtcctttttcatgatgatggtagtgtaaaaggaattgccactaacgatgta
gggatacaaaaggatggtgcaccaaagccttctcttggttcctatctccaatatgcatct
tatcataagaattctgatttggacatttttaagttacagaggttaagtaacttggctggg
gtcagacacctggcaacatttgagagaggactggaactacatgctaaagtcacaattttt
gcagaaggttgccatggacatctagccaagcaactatataagaagtttgatttgagagca
aattgtgaacctcaaacctacgggattggactgaaggagttatgggttattgatgaaaag
aactggaaacctgggagagtagatcacactgttggttggcccttggacagacatacctat
ggaggatctttcctctatcatttgaatgaaggtgaacccctagtagctcttggtcttgtg
gttggtctagactatcagaatccatacctgagtccatttagagagttccaaaggtggaaa
caccatcctagcattcggccaaccttggaaggtggaaaaaggattgcatacggagccaga
gctctcaatgaaggtggctttcagtctataccaaaactcacctttcctggtggtttacta
attggttgtagtcctggttttatgaatgttcccaagatcaaaggtactcacacagcaatg
aaaagtggaattttagcagcagaatctatttttaatcaactaactagtgaaaatctccaa
tcaaagacaataggttctgactttgaacggctcaagccagccaaggattgcacacctatt
gagtatccaaaacccgatggacagatcagttttgacctcttgtcatctgtggctctgagt
ggtactaatcatgaacatgaccagccggcacacttaaccttaagggatgacagtatacct
gtaaatagaaatctgtcgatatatgatgggcccgagcagcgattctgtcctgcaggagtt
tatgaatttgtacctgtggaacaaggtgatggatttcggttacagataaatgctcagaac
tgtgtacattgtaaaacatgtgatattaaagatccaagtcagaatattaactgggtggta
cctgaaggtggaggaggacctgcttacaatggaatgtaa

>gi568815594f:158580466_158808524|GENSCAN_predicted_peptide_3|364_aa
MNLVLFLGPVAFLGQFRNQGTRPSAPGFHKPIYGGLVASQVCDGDHAKPSNPSNPRVFFD
VDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFM
IQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPH
LDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGELKEGDDGGIFPKDGSGDS
HPDFPEDADIDLKDRRVIPVYVVFHTAFINAFCRYVDSSKAVIETADRAKLQPIALSCVL
NIGACKLKMSNWQGAIDSCLEADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDKEKAVYA
KMFA

>gi568815594f:158580466_158808524|GENSCAN_predicted_CDS_3|1095_bp
atgaatcttgttctctttctggggcctgttgccttcctgggacagttcaggaatcaagga
acacgtccctctgctcctggatttcacaaacccatctatggaggtttggtggcttcccag
gtatgtgacggggaccatgccaagccctccaaccccagtaaccctcgagtcttctttgac
gtggacatcggaggggagcgagttggtcgaattgtcttagaattgtttgcagatatcgta
cccaaaactgcggaaaattttcgtgcactgtgtacaggagaaaaaggcattggacacacg
actgggaaacctctccatttcaaaggatgcccttttcatcgaattattaagaaatttatg
attcagggtggagacttctcaaatcagaatgggacaggtggagaaagtatttatggtgaa
aaatttgaagatgaaaatttccattacaagcatgatcgggagggtttactgagcatggca
aatgcaggccgcaacacaaacggttctcagttttttatcacaacagttccaactcctcat
ttggatgggaaacatgtggtgtttggccaagtaattaaaggaataggagtggcaaggata
ttggaaaatgtggaagtgaaaggtgaaaaacctgctaaattgtgcgttattgcagaatgt
ggagaattgaaggaaggagatgacgggggaatattcccaaaagatggctctggcgacagt
catccagatttccctgaggatgcggatatagatttaaaagatagaagagtaattcctgtt
tatgtggtctttcatactgcttttattaatgcattctgcagatacgtggacagttcaaag
gctgttattgagacagcagatagagccaagctgcaacctatagctttaagctgtgtactg
aatattggtgcttgtaaactgaagatgtcaaattggcagggagcaattgacagttgttta
gaggctgatcttaagaaagctcaggggatagcaccagaagataaagctatccaggcagaa
ttgctgaaagtcaaacaaaagataaaggcacagaaagataaagagaaggcagtatatgca
aaaatgtttgcttag

>gi568815594f:158580466_158808524|GENSCAN_predicted_peptide_4|337_aa
MIVMSEKVHDCDSASGKGHRLLALIEECEGELLCAEIKSERGGECSFKEGGWERTKPEGA
EEGSGKNSPGRTPNTKAQVENSLRTRTASWYIFQDRPTEAATARTKPSPLAYAFCERALV
PEQSEDPSSGALSLKNKDRPSCMLAVRKNPGSRHGRSCGGGIMAPTLLQKLFNKRGSSGS
SAAASAQGRAPKEGPAFSPWKNCLPRSQSLVLEKVGDRCPKPWLVAVCRLGDCCSKAWEW
AFSQVSNLGLEVGPGSTASEGFGEESGHHRRQCDCLEILATGKRECSSHNKGTSGFVSKS
MFMVRINQKNIKPFRRCAAAQRTPQTSQRAGKTLPDV

>gi568815594f:158580466_158808524|GENSCAN_predicted_CDS_4|1014_bp
atgattgtgatgtctgaaaaagttcatgattgtgattctgcatctggtaagggccacagg
ctgcttgcactcatagaagaatgtgaaggggagctgctgtgtgcagagatcaagagcgaa
agaggaggggaatgtagttttaaagagggtggttgggaaaggacaaaacctgaaggagct
gaggaaggttcagggaagaacagcccaggaagaacaccaaatactaaggcccaagttgag
aacagtctgcgtacaagaacagccagctggtatattttccaagataggcccaccgaagcg
gccaccgcgcgtaccaagccttcccccctagcatacgccttctgtgaacgggctcttgta
cctgaacaaagcgaggacccaagttcaggggctttgtctctaaagaacaaagatcggcct
agctgcatgctcgctgtgcgaaagaacccaggctcccgccacggccggagctgcggcggc
ggcatcatggccccgaccctgctccagaagctcttcaacaaaaggggcagcagcggcagc
tccgcggcggcgtctgcccagggcagggctcctaaggaaggacccgcctttagtccatgg
aaaaattgtcttccacgaagccagtccctggtcctggaaaaggttggggaccgctgccct
aaaccgtggttggtggcagtgtgtagactcggtgactgttgttccaaggcatgggaatgg
gctttttctcaggtgtcaaatcttggattggaggtgggtcctggcagcactgcatccgaa
ggttttggagaggagtctgggcatcacaggagacaatgtgattgtttagagattttggcc
acggggaaaagagaatgttcctcacataacaaaggaacttcaggatttgtctccaagtcc
atgtttatggtcaggataaaccagaagaacattaaaccgttcaggagatgtgcggcggca
cagcgaacaccacaaaccagccagagagctggcaagactctgccagatgtgtga