GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:00:19

Sequence gi568815594r:67640483_67854335 : 213853 bp : 36.82% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +  13089  13427  339  2  0   88   37   327 0.984  23.38
 1.02 PlyA +  13473  13478    6                               1.05

 2.00 Prom +  14516  14555   40                              -6.15
 2.01 Sngl +  16035  16790  756  2  0   24   38   282 0.961  12.69
 2.02 PlyA +  16966  16971    6                               1.05

 3.10 PlyA -  17439  17434    6                               1.05
 3.09 Term -  20425  20124  302  2  2   81   37   156 0.716   4.20
 3.08 Intr -  23465  23348  118  2  1  101   64    70 0.726   5.02
 3.07 Intr -  24810  24707  104  1  2  106   78    44 0.991   4.17
 3.06 Intr -  28192  28069  124  1  1   48  114    73 0.991   5.14
 3.05 Intr -  33295  33215   81  1  0   68   86    81 0.950   4.82
 3.04 Intr -  37240  37129  112  0  1   72   92    62 0.999   4.46
 3.03 Intr -  38051  37957   95  2  2   74  103    83 0.998   6.24
 3.02 Intr -  41109  41081   29  1  2  108  115    12 0.985   2.82
 3.01 Init -  41700  41637   64  0  1   74   99     1 0.457   1.26
 3.00 Prom -  42922  42883   40                              -5.95

 4.00 Prom +  46936  46975   40                              -4.45
 4.01 Init +  58626  58681   56  2  2   87   92    39 0.830   5.01
 4.02 Intr +  60486  60671  186  0  0   60   97   213 0.809  17.28
 4.03 Term +  60781  60886  106  1  1   41   37   178 0.796   4.90
 4.04 PlyA +  61032  61037    6                               1.05

 5.03 PlyA -  62507  62502    6                               1.05
 5.02 Term -  76411  76066  346  0  1   22   43   404 0.973  22.28
 5.01 Init -  76906  76509  398  1  2   84   63   383 0.965  29.62
 5.00 Prom -  79020  78981   40                              -5.55

 6.04 PlyA -  79201  79196    6                              -1.75
 6.03 Term -  80228  79603  626  0  2   58   37   483 0.430  33.76
 6.02 Intr -  85881  85754  128  2  2  -24    9   154 0.030  -4.30
 6.01 Init -  90818  90694  125  2  2   71   60   100 0.378   5.19
 6.00 Prom -  90872  90833   40                              -5.65

 7.04 PlyA -  90985  90980    6                               1.05
 7.03 Term - 100242  99998  245  1  2  104   38   127 0.823   4.38
 7.02 Intr - 104305 104086  220  1  1   34   92    64 0.020  -1.65
 7.01 Init - 113853 113332  522  0  0   61  115   301 0.989  25.00
 7.00 Prom - 125138 125099   40                              -5.05

 8.08 PlyA - 125211 125206    6                               1.05
 8.07 Term - 126167 126039  129  2  0   90   44   160 0.938   9.00
 8.06 Intr - 130202 130086  117  2  0   18  111    73 0.194   2.34
 8.05 Intr - 182016 181954   63  0  0  107   66    45 0.048   2.20
 8.04 Intr - 185392 185250  143  2  2   53  115    47 0.961   3.05
 8.03 Intr - 187038 186779  260  2  2   48  119   123 0.797   7.58
 8.02 Intr - 202143 202076   68  0  2   77  105    32 0.839   0.58
 8.01 Intr - 213704 213586  119  0  2  128  119    25 0.985   8.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 197847 197690  158  2  2   65  103   107 0.920   8.63


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:67640483_67854335|GENSCAN_predicted_peptide_1|112_aa
MGRNQSRKAKNSKNQSASSPPKDWRSSPATEQNWMENDFDELTEVGFRRLVITNFSELKE
HVLTHCKEAKNLEKGLEELLTRINSVEKTLNDLMELKTTARELHDACTSFNS

>gi568815594r:67640483_67854335|GENSCAN_predicted_CDS_1|339_bp
atggggagaaaccagagcagaaaagccaaaaattctaaaaaccagagtgcctcttctcct
ccaaaggattggagatcctcgccagcaacggaacaaaactggatggagaatgactttgat
gagctgacagaagtaggcttcagaaggttggtaataacaaacttctccgagctaaaggag
catgttctaacccattgcaaggaagctaaaaaccttgaaaaagggttagaagaattgcta
actagaataaacagtgtagagaagaccttaaatgacctgatggagctgaaaaccacagca
cgagaacttcacgatgcatgcacaagcttcaatagctga

>gi568815594r:67640483_67854335|GENSCAN_predicted_peptide_2|251_aa
MKRYLKIIRAIYDKPTANIILNGQKLEAFPWKTGTRQGCPLSPLLFNIVLEVLARAIRQE
KEIKGIQLGKEEVKLSLFADDLIVYLENPNISAQNLLKLISNFSKVSGYKINVQKSQAFL
YTNYRQRDSQTVSELSFTIATKRIKYLGIQLTRNVKDLLKEKYNPLLNEIKEDTNKWKNI
PCSWIGRINIIKTPILPKVIYRLNAIPIKLPMTFFTEVEKNYFKVHMEPQKSLHSQDNPK
QREQSWKHHTI

>gi568815594r:67640483_67854335|GENSCAN_predicted_CDS_2|756_bp
atgaaacgttacctcaaaataataagagctatttatgacaaacccacagccaatatcata
ctgaatgggcaaaaactggaagcattcccttggaaaactggtacaagacaaggatgccct
ctctcaccactcctattcaacatagtcttggaagttctcgccagggcaatcaggcaagag
aaagaaataaagggtattcaattaggaaaagaggaagtcaaattgtctctgtttgcagat
gacctgattgtatatttagaaaaccccaacatctcagcccaaaatctccttaagctgata
agcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattccta
tacaccaattatagacaaagagatagccaaactgtgagtgaactttcattcacaattgct
acaaagagaataaaatacctaggaatccaacttacaaggaatgtgaaggacctcctcaag
gagaagtacaacccactgctcaacgaaataaaagaggacacaaacaaatggaagaacatt
ccatgctcatggataggaagaatcaatatcattaaaacgcccatactgcccaaggtaatt
tatagactcaatgccatccccatcaagctaccaatgactttcttcacagaagtggaaaaa
aactactttaaagttcatatggaaccacaaaagagcctgcatagccaagacaatcctaag
caaagagaacaaagctggaagcatcatactatctga

>gi568815594r:67640483_67854335|GENSCAN_predicted_peptide_3|342_aa
MQKMAKSHVFLSGMGGLGLEIAKNLVLAGIKAVTIHDTEKCQAWDLGTNFFLSEDDVVNK
RNRAEAVLKHIAELNPYVHVTSSSVPFNETTDLSFLDKYQCVVLTEMKLPLQKKINDFCR
SQCPPIKANPGIVTCLENHPHKLETGQFLTFREINGMTGLNGSIQQITVISPFSFSIGDT
TELEPYLHGGIAVQVKTPKTVFFESLERQLKHPKCLIVDFSNPEVNKHFAGLREAAESEM
RISHADARGGFPWSWAASPCGYARYSPPSDCFHELALSVAAFPDSWSKLSLDLPFRDLED
CGTLLTALLGSANGDSLWGLQPHIILLHCLSKKFSMRAPPLQ

>gi568815594r:67640483_67854335|GENSCAN_predicted_CDS_3|1029_bp
atgcagaagatggccaagtcccatgttttcttaagtgggatgggtggtcttggtttggaa
attgcaaagaatcttgttcttgcagggattaaggcagttacaattcatgatacagaaaaa
tgccaagcatgggatctaggaaccaacttctttctcagtgaagatgatgttgttaataag
agaaacagggctgaagctgtacttaaacatattgcagaactaaatccatacgttcatgtc
acatcatcttctgttcctttcaatgagaccacagatctctcctttttagataaataccag
tgtgtagtattgactgagatgaaacttccattgcagaagaagatcaatgacttttgccgt
tctcagtgccctccaattaaggcaaatcctggcattgttacttgccttgaaaatcatcct
cacaaactggagacaggacaattcctaacatttcgagaaattaatggaatgacaggttta
aatggatctatacaacaaataacggtgatatcgccattttcttttagtattggtgacacc
acagaactggaaccatatttacatggaggcatagctgtccaagttaagactcctaaaaca
gttttttttgaatcactggagaggcagttaaaacatccaaagtgccttattgtggatttt
agcaaccctgaggtaaataaacactttgcaggtttgagagaggcagcagaatcagagatg
agaattagtcacgctgatgcaagaggtgggttcccatggtcttgggcagcttcaccctgt
ggttatgcaaggtacagccccccttccgactgctttcatgagttggcattgagtgttgca
gcttttccggattcatggtccaagctttcgttggatctaccattccgggatctggaggac
tgtggcactcttctcacagctctactaggcagtgccaatggggactctctgtgggggctc
caaccccacattatccttctgcactgccttagcaagaagttctccatgagggccccaccc
ctgcagtaa

>gi568815594r:67640483_67854335|GENSCAN_predicted_peptide_4|115_aa
MAFKKRICTKHWQAEIIPSPPERKKQKPGAWVPPATPHLRPSRPLTCQSPRKNRTPLPPD
GRPQARILPLPPETPPPATGRGVLVSGLGVAAWRAVVQVAEGGVTVATGIRIRQM

>gi568815594r:67640483_67854335|GENSCAN_predicted_CDS_4|348_bp
atggccttcaaaaaacgtatctgtactaaacactggcaagcagagataattcccagcccg
ccggaaagaaagaagcagaaacccggagcctgggtcccacccgcgacccctcaccttcgc
ccttctcgtcctctcacctgccagtcccccaggaagaacaggacgcctcttccccctgat
gggcggccacaggctcggatccttccattgccgcctgagacaccgccgccggctactgga
aggggcgtcctggtttccggtttgggtgtggccgcatggcgtgctgtggtgcaggtggcc
gaagggggcgttactgttgcgactggcatccgcatccggcagatgtag

>gi568815594r:67640483_67854335|GENSCAN_predicted_peptide_5|247_aa
MVTLRKRTLKVLTFLVLFIFLTSFLNYSHAMVATTWFPKKMVLELLENLKRLIKHRPCTC
THCIRQHGLSAWFDERFNQIVQLLLTAQNALLEDNTYQWWLRLQQEKKPNIINNTIKEFR
AVPGNVDPMLEKRMNKAPTAGFEAAAGSKTAHHLVYPESFRELGDNVSMVLVPLKTMNLE
WVVSTTTTGAISHTYTPVLVKIRVKQDKILIYHPAFIKYVFDNWLQSHRRYPLTSILSVI
FSMHVCD

>gi568815594r:67640483_67854335|GENSCAN_predicted_CDS_5|744_bp
atggtgaccctgcggaagaggaccctgaaagtgctcaccttcctcgtgctcttcatcttc
ctcacctccttcctgaactactcccacgccatggtggccaccacctggttccccaagaag
atggtcctggagctcttggagaacctgaagagactgatcaagcacaggccctgcacttgc
acccactgcatcaggcagcatgggctctcagcctggttcgatgagaggttcaaccagata
gtgcagctgctgctgactgcccagaacgcgctcttggaggacaacacctaccaatggtgg
ctgaggctccagcaggagaagaagcccaatatcatcaacaataccatcaaggaattcaga
gcagtacctgggaatgtggacccaatgctggagaagaggatgaacaaggcacccacggca
gggtttgaagctgctgccgggagcaaaaccgcccaccatctggtgtaccctgagagcttc
cgggagctgggggacaatgtcagcatggtcctggtgcccttaaagaccatgaacttggag
tgggtggtgagcaccaccaccacgggtgccatttcccacacctacaccccggtcctcgtg
aagatcagagtgaaacaggataagatcctgatctaccacccagccttcatcaagtatgtc
ttcgacaactggctgcagagccacaggcggtacccactcaccagcatcctctcggtcatc
ttctcaatgcatgtctgcgattag

>gi568815594r:67640483_67854335|GENSCAN_predicted_peptide_6|292_aa
MGKDFMTKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNSPNPMPNNKSILREDDSFN
TFFNGTIVVKHGSTKLFVDLEPIRAAHLKPSSLNLKVIAMDLAQMHACQGPGNDLYIEAS
AALCAGSDFSVSGGLQWVQLVAHGSAGDDNGWLRCHRPPWQGLGDNELDGCSGEVNVSQD
FCGKYTDVVNHITQRLDYVLCRTYAAQRTCHSGSVVKEVPQHLVPTPNAYLQPARDLQMC
LKLFSILSKVLLRPKDTITSQRQFHSYPETVIKDICKGMWEDSHCVLPLGAP

>gi568815594r:67640483_67854335|GENSCAN_predicted_CDS_6|879_bp
atgggcaaggatttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaatagac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacagcccaaatccaatgccaaacaataagagcattctgagagaagatgactcctttaat
accttcttcaacgggactattgtggtcaagcatggctccacaaaattgtttgtggaccta
gagccaatacgtgctgcccatctgaagccctctagcctcaacctgaaggttattgccatg
gatctggcccagatgcacgcctgtcaaggacctggaaatgacctttacattgaagcatct
gctgctctgtgtgcaggctctgatttcagtgtgtcaggaggactgcagtgggtccagctt
gtagctcatggaagtgctggtgatgataatggctggctcaggtgccacaggcctccatgg
caaggtttaggagacaatgaactcgatggttgcagtggagaagtcaatgtcagccaggat
ttctgtgggaaatacacagatgtggtcaaccacatcacacaacgactggactatgtactc
tgcagaacttatgcagctcaacgtacttgtcactcaggctctgttgtaaaagaagtgcca
caacacttggtccccacacccaatgcctatctccagccagccagagacctgcagatgtgt
ctaaaacttttttccatcctgtccaaagtgctgctgaggccaaaggacaccatcacctcc
caaaggcagtttcacagctaccctgagacagtgataaaggacatctgcaaaggcatgtgg
gaggacagccattgtgtcctgcctctgggtgctccctag

>gi568815594r:67640483_67854335|GENSCAN_predicted_peptide_7|328_aa
MANSASPEQNQNHCSAINNSIPLMQGNLPTLTLSGKIRVTVTFFLFLLSATFNASFLLKL
QKWTQKKEKGKKLSRMKLLLKHLTLANLLETLIVMPLDGMWNITVQWYAGELLCKVLSYL
KLFSMYAPAFMMVVISLDRSLAITRPLALKSNSKVGQSMVGLAWILSSVFAGPQLYIFRM
IHLADSSGQTKVFSQCVTHCSFSQWWHQAFYNFFTFSCLFIIPLFIMLICNAKIIFTLTR
VLHQDPHELQLNQSKNNIPRARLKTLKMTVAFATSFTVCWTPYYVLGIWYWFDPEMLNRL
SDPVNHFFFLFAFLNPCFDPLIYGYFSL

>gi568815594r:67640483_67854335|GENSCAN_predicted_CDS_7|987_bp
atggcaaacagtgcctctcctgaacagaatcaaaatcactgttcagccatcaacaacagc
atcccactgatgcagggcaacctccccactctgaccttgtctggaaagatccgagtgacg
gttactttcttcctttttctgctctctgcgacctttaatgcttctttcttgttgaaactt
cagaagtggacacagaagaaagagaaagggaaaaagctctcaagaatgaagctgctctta
aaacatctgaccttagccaacctgttggagactctgattgtcatgccactggatgggatg
tggaacattacagtccaatggtatgctggagagttactctgcaaagttctcagttatcta
aagcttttctccatgtatgccccagccttcatgatggtggtgatcagcctggaccgctcc
ctggctatcacgaggcccctagctttgaaaagcaacagcaaagtcggacagtccatggtt
ggcctggcctggatcctcagtagtgtctttgcaggaccacagttatacatcttcaggatg
attcatctagcagacagctctggacagacaaaagttttctctcaatgtgtaacacactgc
agtttttcacaatggtggcatcaagcattttataactttttcaccttcagctgcctcttc
atcatccctcttttcatcatgctgatctgcaatgcaaaaatcatcttcaccctgacacgg
gtccttcatcaggacccccacgaactacaactgaatcagtccaagaacaatataccaaga
gcacggctgaagactctaaaaatgacggttgcatttgccacttcatttactgtctgctgg
actccctactatgtcctaggaatttggtattggtttgatcctgaaatgttaaacaggttg
tcagacccagtaaatcacttcttctttctctttgcctttttaaacccatgctttgatcca
cttatctatggatatttttctctgtga

>gi568815594r:67640483_67854335|GENSCAN_predicted_peptide_8|299_aa
XQKSYFYRSSFQLLNVEYNSQLNSPATQEYRTLSGRIESLITKTFKESNLRNQFIRAHVA
KLSNSNPRDWIATSGISTTFPKLRMRVRNILIHNNYKSATHENDIALVRLENSVTFTKDI
HSVCLPAATQNIPPGSTAYVTGWGAQEYAGHTVPELRQGQVRIISNDVCNAPHSYNGAIL
SGMLCAGVPQGGVDACQGDSGGPLVQEDSRRLWFIVGIGLVKIIDNRTCNNGEADGRVIT
SGMLCAGFLEPRVDACQGDSGGPLVGTDSKGILAKGSLLVLKAGEMNVLFQTSLVSTLK

>gi568815594r:67640483_67854335|GENSCAN_predicted_CDS_8|900_bp
natcaaaaatcttacttttataggagcagttttcaactcctaaatgttgaatataatagt
cagttaaattcaccagctacacaggaatacaggactttgagtggaagaattgaatctctg
attactaaaacattcaaagaatcaaatttaagaaatcagttcatcagagctcatgttgcc
aaactgagcaactctaatcctcgtgactggattgccacgtctggtatttccacaacattt
cctaaactaagaatgagagtaagaaatattttaattcataacaattataaatctgcaact
catgaaaatgacattgcacttgtgagacttgagaacagtgtcacctttaccaaagatatc
catagtgtgtgtctcccagctgctacccagaatattccacctggctctactgcttatgta
acaggatggggcgctcaagaatatgctggccacacagttccagagctaaggcaaggacag
gtcagaataataagtaatgatgtatgtaatgcaccacatagttataatggagccatcttg
tctggaatgctgtgtgctggagtacctcaaggtggagtggacgcatgtcagggtgactct
ggtggcccactagtacaagaagactcacggcggctttggtttattgtggggataggatta
gtgaagattatagataataggacctgcaacaatggggaggcagatggcagagtcatcaca
tctggaatgttgtgtgccgggttcctggagccacgtgtggatgcctgccagggtgactct
ggtggaccactggttggtacagattctaaaggcatccttgctaaaggttccctgctggta
ttgaaagctggagaaatgaacgtgctcttccaaacaagcctagtgtctacactcaagtga