GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:36:38

Sequence gi568815595f:189689801_189994499 : 304699 bp : 37.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  32625  32761  137  2  2   46   67   105 0.015   3.86
 1.02 Intr +  48842  48974  133  2  1   96   92   199 0.996  20.83
 1.03 Intr +  92571  92624   54  2  0   58   92    77 0.030   3.36
 1.04 Intr + 118472 118726  255  1  0   61  107   298 0.623  25.72
 1.05 Term + 123199 123303  105  0  0   56   34    95 0.668  -1.67
 1.06 PlyA + 123977 123982    6                               1.05

 2.00 Prom + 126730 126769   40                              -5.95
 2.01 Init + 128422 128486   65  0  2   41  108    33 0.312   1.27
 2.02 Intr + 133595 133725  131  2  2  -26   78   176 0.139   4.62
 2.03 Intr + 141640 141744  105  2  0   75  103    60 0.069   5.47
 2.04 Term + 159605 159744  140  0  2   39   54   168 0.003   5.64
 2.05 PlyA + 159972 159977    6                               1.05

 3.00 Prom + 160616 160655   40                              -7.65
 3.01 Init + 166795 166848   54  0  0   66   94    75 0.923   7.23
 3.02 Intr + 174306 174618  313  2  1   20   98   272 0.605  16.23
 3.03 Intr + 176882 176997  116  0  2  114   98    93 0.991  12.15
 3.04 Intr + 177658 177825  168  0  0   77   67    54 0.717   1.42
 3.05 Intr + 178033 178142  110  0  2   88   89    64 0.999   4.66
 3.06 Intr + 178241 178320   80  2  2   57   98    61 0.989   2.28
 3.07 Intr + 178780 178916  137  2  2   87   97   130 0.971  13.17
 3.08 Intr + 183059 183195  137  1  2  102   79   137 0.982  12.65
 3.09 Intr + 196594 196751  158  1  2  117   61   165 0.927  15.43
 3.10 Intr + 199540 199684  145  2  1   89  109    28 0.966   3.42
 3.11 Intr + 200989 201082   94  1  1  118   95    46 0.997   7.35
 3.12 Intr + 204406 204698  293  0  2  103   38   370 0.029  28.51
 3.13 Term + 216985 217246  262  1  1   55   37   182 0.017   3.81
 3.14 PlyA + 217357 217362    6                              -0.45

 4.22 PlyA - 217442 217437    6                              -0.45
 4.21 Term - 218306 218110  197  0  2   50   41   149 0.244   2.99
 4.20 Intr - 218942 218828  115  2  1   93   36    68 0.426   1.20
 4.19 Intr - 219182 219093   90  2  0   91   57    62 0.384   2.67
 4.18 Intr - 248387 248247  141  2  0   38   94   181 0.587  13.33
 4.17 Intr - 253515 253389  127  2  1  100   51    71 0.403   4.36
 4.16 Intr - 264842 264688  155  2  2   28   45   119 0.015  -0.45
 4.15 Intr - 274298 274158  141  2  0   87   97    89 0.904   9.33
 4.14 Intr - 278606 278486  121  1  1   71   54    85 0.563   2.98
 4.13 Intr - 279522 279279  244  1  1   39    3   242 0.536   6.43
 4.12 Intr - 280103 279710  394  2  1   68   10   239 0.040   7.40
 4.11 Intr - 281091 281016   76  2  1   69   93    57 0.064   2.90
 4.10 Intr - 282207 282090  118  1  1  107   48    87 0.091   5.20
 4.09 Intr - 283224 283074  151  0  1  105   85   114 0.991  11.61
 4.08 Intr - 284204 284109   96  2  0  110   37   130 0.985   9.39
 4.07 Intr - 284885 284758  128  0  2   59   37   233 0.144  14.78
 4.06 Intr - 293340 293246   95  2  2   28  115    72 0.787   2.59
 4.05 Intr - 294790 294750   41  1  2   45  123    53 0.903   0.60
 4.04 Intr - 297077 296988   90  2  0  124  111    57 0.995  10.87
 4.03 Intr - 297869 297727  143  0  2  113   78   168 0.999  17.45
 4.02 Intr - 299238 299107  132  1  0   74   88    60 0.800   4.30
 4.01 Intr - 304483 304294  190  1  1   99   98   225 0.991  22.84

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  47995  48068   74  0  2   86   98    16 0.991   2.99
S.002 Init -  78670  78568  103  1  1   56   58   100 0.882   4.25
S.003 Init - 147012 146851  162  0  0   49   96   138 0.828  10.48
S.004 Term + 190264 190378  115  1  1  103   43   106 0.803   4.66
S.005 Term + 204406 204702  297  0  0  103   52   371 0.966  29.28
S.006 Term - 272007 271907  101  1  2   65   47   176 0.836   8.51
S.007 Term - 282207 282080  128  1  2  107   42    93 0.897   4.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:189689801_189994499|GENSCAN_predicted_peptide_1|227_aa
MHDRIFGPEGLRAQGNQPLHFTEEELESQTGAGTCPRSQPVNALGLPICSVQPIDLNFVD
EPSEDGATNKIEISMDCIRMQDSDLSDPMWLTASMTICHGGSCMEDMAPQYTNLGLLNSM
DQQIQNGSSSTSPYNTDHAQNSVTAPSPYAQPSSTFDALSPSPAIPSNTDYPGPHSFDVS
FQQSSTAKSATWTTSAGWLCCFPKPAQADVGSPCQCKERPFPDLRTC

>gi568815595f:189689801_189994499|GENSCAN_predicted_CDS_1|684_bp
atgcacgatagaatctttggaccagagggccttagagctcaggggaatcaaccccttcac
ttcacagaggaggaacttgaatcccaaacaggggcagggacttgcccaagatcccagcca
gtgaacgcattgggcctgcctatatgttcagttcagcccattgacttgaactttgtggat
gaaccatcagaagatggtgcgacaaacaagattgagattagcatggactgtatccgcatg
caggactcggacctgagtgaccccatgtggttgactgcgtctatgaccatttgccatggt
ggcagctgtatggaggatatggcaccacagtacacgaacctggggctcctgaacagcatg
gaccagcagattcagaacggctcctcgtccaccagtccctataacacagaccacgcgcag
aacagcgtcacggcgccctcgccctacgcacagcccagctccaccttcgatgctctctct
ccatcacccgccatcccctccaacaccgactacccaggcccgcacagtttcgacgtgtcc
ttccagcagtcgagcaccgccaagtcggccacctggacgacttctgcaggctggctctgc
tgctttccgaagcctgcccaagcagatgtaggctctccttgccagtgcaaggagaggccc
tttccagatttaagaacctgttga

>gi568815595f:189689801_189994499|GENSCAN_predicted_peptide_2|146_aa
MFSHKNSVIIMDKISDQAIVINRWRLVGGACSKGEQFGECHGMQTHTVELSTQSVMWLTH
QGKDRGHFHFHDIIRASQPHSKFSVVIFIFMLRMRTRKLTDLRVDSVTVELEDTQLGVCC
LVSGEKLPHIWPQKSSSVLMIVAVVM

>gi568815595f:189689801_189994499|GENSCAN_predicted_CDS_2|441_bp
atgttttcccataagaacagtgtcataattatggataaaatttctgaccaagctattgtc
atcaacagatggcggttggttggaggggcctgcagtaaaggagagcagtttggagaatgc
cacggcatgcagacgcacactgtggagctgagcactcagtcggtgatgtggctcactcac
caggggaaggacagaggtcattttcatttccatgatatcattcgagcttcacaaccacac
tccaagttcagtgttgttatcttcatcttcatgttgaggatgaggacacggaagctcaca
gatctccgggtagacagtgtcacagttgaattggaggacacccagcttggtgtctgctgc
ttggtgagtggtgaaaaactcccacacatttggccacagaagtcatcttctgtgttgatg
attgttgctgtggtaatgtga

>gi568815595f:189689801_189994499|GENSCAN_predicted_peptide_3|688_aa
MIIYVDRKEGIYKKLQELPVVNRQHAALKSGQIFIVLIWNVTISPVGSLLPFSTGPNSKQ
YSTELKKLYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREF
NEGQIAPPSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQGKYSWSIATVFGNYPQFSL
FSDIHEGGIAYLNYMMWISLQTNRIKDHKMLKPVSPKVGTEFTTVLYNFMCNSSCVGGMN
RRPILIIVTLETRDGELVLCALNPCYKRLHKRSKKVETKEVGKSWADAALRPGSVLAQEE
TGRRMKIASESSKFRTVQRTVMVRSAVRGRETYEMLLKIKESLELMQYLPQHTIETYRQQ
QQQQHQHLLQKQTSIQSPSSYGNSSPPLNKMNSMNKLPSVSQLINPQQRNALTPTTIPDG
MGANIPMMGTHMPMAGDMNGLSPTQALPPPLSMPSTSHCTPPPPYPTDCSIVSFLARLGC
SSCLDYFTTQGLTTIYQIEHYSMDDLASLKIPEQFRHAIWKGILDHRQLHEFSSPSHLLR
TPSSASTVSVGSSETRGERVIDAVRFTLRQTISFPPRDEWNDFNFDMDARRNKQQRIKEE
GELEDLESRQCNSVCVQRLKNKARGGGCWWIVCILAGNWEYRCLKVKKMMEVAAQIGGKF
VPPPPLALFRPSRDATHIGEDDLLYSVY

>gi568815595f:189689801_189994499|GENSCAN_predicted_CDS_3|2067_bp
atgatcatctatgtagatcgtaaggaaggcatctacaaaaagctacaagaactaccagta
gtaaacaggcagcatgcagctctaaaaagtggacagattttcattgttctgatttggaat
gtaacaatatctcctgttggttctctccttcctttctccactggccccaactctaagcag
tattccactgaactgaagaaactctactgccaaattgcaaagacatgccccatccagatc
aaggtgatgaccccacctcctcagggagctgttatccgcgccatgcctgtctacaaaaaa
gctgagcacgtcacggaggtggtgaagcggtgccccaaccatgagctgagccgtgaattc
aacgagggacagattgcccctcctagtcatttgattcgagtagaggggaacagccatgcc
cagtatgtagaagatcccatcacaggaagacagagtgtgctggtaccttatgagccaccc
cagggaaaatattcttggagcattgctactgtttttggcaattatccccagttttccctt
ttcagtgatattcatgaaggtggtatagcctatttgaattacatgatgtggatcagctta
caaacgaacaggatcaaagatcacaaaatgttaaagcctgtctcacctaaggttggcact
gaattcacgacagtcttgtacaatttcatgtgtaacagcagttgtgttggagggatgaac
cgccgtccaattttaatcattgttactctggaaaccagagacggagagcttgtcctttgt
gctctaaatccttgctacaaacggttacataaaagatctaagaaagtggagacaaaggaa
gtgggcaagtcctgggccgacgctgctttgaggcccggatctgtgcttgcccaggaagag
acaggaaggcggatgaagatagcatcagaaagcagcaagtttcggacagtacaaagaacg
gtgatggtacgaagcgccgtgaggggccgtgagacttatgaaatgctgttgaagatcaaa
gagtccctggaactcatgcagtaccttcctcagcacacaattgaaacgtacaggcaacag
caacagcagcagcaccagcacttacttcagaaacagacctcaatacagtctccatcttca
tatggtaacagctccccacctctgaacaaaatgaacagcatgaacaagctgccttctgtg
agccagcttatcaaccctcagcagcgcaacgccctcactcctacaaccattcctgatggc
atgggagccaacattcccatgatgggcacccacatgccaatggctggagacatgaatgga
ctcagccccacccaggcactccctcccccactctccatgccatccacctcccactgcaca
cccccacctccgtatcccacagattgcagcattgtcagtttcttagcgaggttgggctgt
tcatcatgtctggactatttcacgacccaggggctgaccaccatctatcagattgagcat
tactccatggatgatctggcaagtctgaaaatccctgagcaatttcgacatgcgatctgg
aagggcatcctggaccaccggcagctccacgaattctcctccccttctcatctcctgcgg
accccaagcagtgcctctacagtcagtgtgggctccagtgagacccggggtgagcgtgtt
attgatgctgtgcgattcaccctccgccagaccatctctttcccaccccgagatgagtgg
aatgacttcaactttgacatggatgctcgccgcaataagcaacagcgcatcaaagaggag
ggggagctggaggaccttgaaagcaggcagtgtaattcagtctgtgtccaaagactcaag
aacaaagcgagaggaggagggtgttggtggattgtgtgcatccttgcagggaactgggaa
taccgatgtctgaaagtcaagaagatgatggaggttgccgctcaaatagggggcaaattt
gtccctcctccacctttggctctcttcaggccctcaagggatgccacccacattggtgaa
gatgatcttctttactcagtctactga

>gi568815595f:189689801_189994499|GENSCAN_predicted_peptide_4|994_aa
ESYNAGVKHYEADDFEMAIRHFEQALREYFVEDTECRTLCEGPQRFEEYEYLGYKAGLYE
AIADHYMQVLVCQHECVRELATRPGRLSPIENFLPLHYDYLQFAYYRVGEYVKALECAKA
YLLCHPDDEDVLDNVDYYESLLDDSIDPASIEAREDLTMFVKRHKLESELIKSAAEGLGF
SYTEPNYWIRYGGRQDENRVPSGVNVEGAEVHGFSMGKKLSPKIDRDLREGGPLLYENIT
FVYNSEQLNGTQRVLLDNVLSEEQCRELHSVASGIMLVGDGYRGKTSPHTPNEKFEGATV
LKALKSGYEGRVPLKSARLFYDISEKARRIVESYFMLNSTLYFSYTHMVCRTALSGQQDR
RNDLSHPIHADNCLLDPEANECWKEPPAYTFRDYSALLYMNDDFEGGEFIFTEMDAKTVT
SRVLAHCSFLSCADMASSTTTTAMKIGIIGGTGLDDPEILEGRTEKYVDTPFGKPFDVLI
LGKIKNVDCVLLARHGRQHTILASKVNYQATIWALKEEGCTHVIGTTACGSLREEIQPGD
IVIIDQFIDRTKSFMFCTWGVDVINMTTVPEVVLTKEAGICYASIAMVTDYDCWKEHEEA
VLVDRDLQTPKENASKAKSLLLTAIPQIGSMEWDMDEAGNHHSQQTNTGTENQTPHVLTH
KWELNNENTWTRRASIKPKCGRMISFSSGGENPHGVKAVTKGKRCAVALWFTLDPLYREL
SAAHKAFIFTYIIVLNAYDTEHVHTLGTPGGILGMDRDVHFADEDMESSGERRGQKRQGG
ADLLPVKCHIKEFHPDPHRCRHLRGIAVQIVLSLPFKDKVTSARAFLSPMRNVASSTVVE
SHHTQFRALEVKAQQNERNWQTCKCKIHTHWSQVLGETYCKEIAFVGKSPWPLELGLIEG
GFSRINFAPKSVLLAILEQHDYLMSLKNVEKSSHYEFAVVSILQLHSSLVVSSVSVDNEW
SLYQLATKQKTRKLTICCSPQGIGAFLLLPHVFV

>gi568815595f:189689801_189994499|GENSCAN_predicted_CDS_4|2985_bp
gagagttacaatgcaggagttaaacattatgaggctgatgactttgagatggctatcagg
cacttcgaacaagccttaagagaatatttcgttgaagatacagaatgccggaccctatgt
gaggggcctcagagatttgaagaatatgagtatttagggtataaggctggtctgtatgaa
gctattgcagatcactacatgcaggtgcttgtttgtcagcatgaatgtgtgagggaactt
gccacccgccctggccgcctctctcccatcgagaattttcttcctctgcactatgattac
ctacagtttgcctactatcgagttggtgagtatgtgaaagccctggagtgtgccaaagcc
tatcttctatgccatccagatgatgaggatgtcctagacaatgtggattactatgagagt
ctgctggatgatagcattgacccggcatccattgaggccagagaggatttaacaatgttt
gtgaaacgtcataagctggagtctgagctgataaaatcagctgcagaaggtctggggttt
tcatacactgaaccgaattattggatcagatatggaggacgacaggatgagaatcgggtc
ccttcaggagtgaacgtagagggagcagaagttcatggattctcaatgggaaaaaagcta
tcacccaagatagatcgagacctaagagaaggtggtcctctactctatgagaacatcaca
ttcgtctacaactcggagcagctgaacgggactcagcgggttctcctggataacgtcctg
tcggaagaacagtgccgggagctccacagcgtggccagtggaatcatgcttgttggtgat
ggatacagaggaaaaacttcaccccatacacccaatgaaaagtttgaaggtgcaactgtc
ctgaaagcactcaaatctggttatgaaggtcgagtcccactgaagagcgctcgtctgttt
tatgacatcagcgaaaaggctcgaaggattgtagaatcttattttatgctgaactcaact
ctgtatttttcctatacacacatggtctgccgaacagccctgtctggtcagcaggataga
agaaatgacctcagtcatcccatccatgctgacaactgtttgttggatccagaggccaac
gaatgctggaaggagcctcctgcttacacatttcgagactatagtgctctcctatatatg
aatgatgactttgaaggaggagaattcatattcacagagatggatgctaagactgtgact
tcccgagtgctcgcccactgcagcttcctttcctgtgcggacatggcctcaagcaccacc
accactgccatgaagattggaataattggtggaacaggcctggatgatccagaaatttta
gaaggaagaactgaaaaatatgtggatactccatttggcaagccatttgatgtcttaatt
ttggggaagataaaaaatgttgattgtgtcctccttgcaaggcatgggaggcagcacacc
atcctggcttccaaggtcaactaccaggcgaccatctgggctttgaaggaagagggctgt
acacatgtcatagggaccacagcttgtggctccttgagggaggagattcaacctggcgat
attgtcattattgatcagttcattgacaggaccaaaagcttcatgttctgcacctggggg
gtggatgttatcaacatgaccacagttccagaggtggttctcactaaagaggctggaatt
tgttatgcgagtattgccatggtgacagattatgactgctggaaggagcacgaggaagca
gttttggtggaccgggacttacagaccccgaaagaaaatgctagtaaagccaaaagttta
ctgctcactgccatacctcagataggatccatggaatgggacatggatgaagctggaaac
catcattctcaacaaacaaacacaggaacagaaaaccaaacaccacatgttctcactcat
aagtgggagctgaacaatgagaacacatggacacggagggcctctataaaaccaaaatgt
gggcgcatgatcagcttctcatctggaggagagaaccctcatggggtgaaggcagtcacc
aagggaaagaggtgtgctgtggctctgtggttcaccttggacccactttatagagaattg
tctgcagctcacaaagcttttattttcacctatattattgttttgaatgcttatgacaca
gagcatgttcacacactgggaaccccaggaggtattctgggcatggatcgtgatgtccat
tttgcagatgaggacatggagagcagtggagagagaaggggacaaaagaggcagggagga
gcagatcttctgccagtcaaatgtcacattaaagaattccacccagatccacacaggtgc
agacacctgaggggcattgccgttcagatagtgctgtctctgccatttaaagacaaagtc
acctcagcccgtgctttcctgtcaccaatgcgaaatgtagccagtagcacagtcgtagaa
tcacatcacactcaatttcgtgctcttgaggtcaaggcccagcagaatgaaaggaactgg
cagacttgcaaatgtaagattcatactcactggagccaagtgttaggggagacttactgt
aaagaaatagcatttgtaggaaaatcaccttggcccctagagcttggtttaattgaaggt
ggtttcagtaggattaactttgctccaaaaagtgtgcttttggctatattggagcagcat
gactatttaatgtctttgaagaacgtagagaaaagcagtcactatgagttcgctgtggtc
agcattctgcaacttcattcttctctcgtagtatccagtgtttctgtggacaatgaatgg
tccctgtatcagctagccacaaaacagaaaactaggaaactcacaatttgctgttcaccc
caaggcattggagccttcctgcttctcccacatgtcttcgtgtaa