GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:37:09

Sequence gi568815595f:186753059_186954701 : 201643 bp : 44.41% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    283    315   33  0  0  127   72     3 0.601   1.02
 1.02 Intr +    993   1065   73  2  1  105  115    18 0.912   5.18
 1.03 Intr +   8382   8555  174  1  0   40   54   149 0.455   6.61
 1.04 Intr +  11136  11160   25  1  1  116   52    -7 0.407  -4.42
 1.05 Intr +  16182  16245   64  0  1   83   96    29 0.558   1.92
 1.06 Term +  19366  19791  426  0  0   93   44   253 0.946  16.70
 1.07 PlyA +  25982  25987    6                               1.05

 2.00 Prom +  30486  30525   40                               0.74
 2.01 Init +  31396  31419   24  0  0   63   94    37 0.882   1.34
 2.02 Intr +  31506  31638  133  2  1   74   93   125 0.998  11.82
 2.03 Intr +  31904  32043  140  0  2   86   72    88 0.824   7.18
 2.04 Intr +  33444  33587  144  2  0   62   78   103 0.965   7.18
 2.05 Intr +  34069  34206  138  0  0   72   99   135 0.999  13.66
 2.06 Intr +  34437  34526   90  2  0   48  111    59 0.952   4.39
 2.07 Intr +  34745  34824   80  1  2   75   94     6 0.966  -1.75
 2.08 Term +  36067  36211  145  1  1   89   31   122 0.975   3.98
 2.09 PlyA +  36686  36691    6                               1.05

 3.10 PlyA -  36860  36855    6                               1.05
 3.09 Term -  37006  36911   96  1  0   75   39    74 0.959  -0.83
 3.08 Intr -  37197  37084  114  0  0   55   97    96 0.955   7.84
 3.07 Intr -  37348  37268   81  1  0   54   98    76 0.966   5.03
 3.06 Intr -  38792  38667  126  2  0   99   78    62 0.990   7.18
 3.05 Intr -  39552  39432  121  2  1  100   76    89 0.983   9.40
 3.04 Intr -  39889  39746  144  0  0   53   88    85 0.800   4.40
 3.03 Intr -  41723  41600  124  0  1   12   89   104 0.445   2.54
 3.02 Intr -  53926  53690  237  2  0   41  115   139 0.887   9.49
 3.01 Init -  57751  57682   70  1  1   81  105    61 0.912   8.31
 3.00 Prom -  62456  62417   40                              -5.06

 4.00 Prom +  62768  62807   40                              -4.16
 4.01 Init +  64574  64632   59  1  2   51   77    69 0.394   2.88
 4.02 Intr +  71923  72152  230  1  2   72   38   107 0.291   1.61
 4.03 Intr +  73494  73564   71  1  2   71  105   120 0.151  10.90
 4.04 Intr +  73989  74086   98  2  2   48   92    64 0.712   1.61
 4.05 Term +  74159  74504  346  2  1   88   39   167 0.889   5.77
 4.06 PlyA +  76207  76212    6                               1.05

 5.00 Prom +  97597  97636   40                              -5.96
 5.01 Init +  99980 100214  235  1  1   46  110   203 0.749  14.60
 5.02 Term + 101126 101646  521  0  2   80   43   645 0.999  53.66
 5.03 PlyA + 103798 103803    6                               1.05

 6.04 PlyA - 103824 103819    6                               1.05
 6.03 Term - 121609 121515   95  2  2   86   49    54 0.273  -0.71
 6.02 Intr - 136969 136585  385  1  1   33   76   457 0.615  33.42
 6.01 Init - 140921 140841   81  2  0   38   98    22 0.630  -0.83
 6.00 Prom - 145977 145938   40                              -3.96

 7.00 Prom + 146214 146253   40                              -9.46
 7.01 Sngl + 147140 147499  360  1  0  110   41   300 0.989  23.57
 7.02 PlyA + 147512 147517    6                               1.05

 8.04 PlyA - 147557 147552    6                               1.05
 8.03 Term - 153282 153014  269  1  2   44   37   183 0.017   4.46
 8.02 Intr - 162818 162651  168  0  0   72   52    62 0.006   0.92
 8.01 Init - 169569 169260  310  0  1   65   42   351 0.315  25.68
 8.00 Prom - 174186 174147   40                              -2.56

 9.03 PlyA - 178805 178800    6                               1.05
 9.02 Term - 189553 189380  174  1  0  107   48    70 0.497   2.66
 9.01 Init - 198313 198230   84  1  0   86   55    82 0.622   3.52

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:186753059_186954701|GENSCAN_predicted_peptide_1|264_aa
GTAASQRINAQIVFPLSEIHNHEPGCLLLVLTRRHASKNRNEIVVKLLEGGVDPHAEDHC
EATAMHRAAAKGNLKMIPILLYYRTSTNIQDTEGKTQRPSRRKGVPIQTPREDSWISHKK
DFRGLSKAEVFLCARRSHSCQLGWRRVPPALVGGGQSWPGGRVPWGVAQTVCPERPRRER
RLRGEREEEAADKVMARRWRKSRRRKRKEMEERMSPEETEGTNFDFAGEAVGQAERKGPA
FSAAEESFHEEEKRRRKEQSDLTF

>gi568815595f:186753059_186954701|GENSCAN_predicted_CDS_1|795_bp
ggaactgctgcctcccagaggataaatgcgcagatagtctttccattatccgaaattcac
aaccatgaacctggctgtttgttgttggtgctgactcgcaggcatgcttccaaaaacagg
aatgagattgttgtcaagttactagaaggcggggttgatccacatgctgaggaccattgt
gaggctacagcaatgcaccgggcagcagccaagggtaacttgaagatgattcctatcctt
ctatactacagaacatccacgaacatccaagacactgaggggaagactcaaagaccttct
aggaggaagggggtcccgatccagaccccaagagaggattcttggatctcgcacaagaaa
gatttcaggggtctttcaaaagccgaggttttcctgtgcgctcggaggagccatagctgc
cagctgggctggcggcgggtgcccccagcccttgtgggcggcgggcagagctggcctggg
ggccgggtcccgtggggggtcgcgcagacagtgtgtccggagcgcccccggcgggagcgc
aggctgcggggcgagagggaagaggaggcggcggataaggtgatggcgagaagatggagg
aagagcagacgaaggaagagaaaggagatggaagagagaatgtcaccagaggagaccgaa
ggaacaaattttgactttgcaggagaagctgtgggccaggcagaaagaaaaggaccagct
ttttctgcagctgaagaaagtttccatgaggaagaaaaacggaggcgaaaggagcagagc
gacctgaccttctga

>gi568815595f:186753059_186954701|GENSCAN_predicted_peptide_2|297_aa
MDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQA
QSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQVVLLSATMPTDVLEVTKKFMR
DPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLT
EKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL
PTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI

>gi568815595f:186753059_186954701|GENSCAN_predicted_CDS_2|894_bp
atggaccccgatggtgtcatcgagagcaactggaatgagattgttgataactttgatgat
atgaatttaaaggagtctctccttcgtggcatctatgcttacggttttgagaagccttcc
gctattcagcagagagctattattccctgtattaaagggtatgatgtgattgctcaagct
cagtcaggtactggcaagacagccacatttgctatttccatcctgcaacagttggagatt
gagttcaaggagacccaagcactagtattggcccccaccagagaactggctcaacaggtt
gtgttgctttctgccacaatgccaactgatgtgttggaagtgaccaaaaaattcatgaga
gatccaattcgaattctggtgaaaaaggaagaattgacccttgaaggaatcaaacagttt
tatattaatgttgagagagaggaatggaagttggatacactttgtgacttgtacgagaca
ctgaccattacacaggctgttatttttctcaatacgaggcgcaaggtggactggctgact
gagaagatgcatgccagagacttcacagtttctgctctgcatggtgacatggaccagaag
gagagagatgttatcatgagggaattccggtcagggtcaagtcgtgttctgatcactact
gacttgttggctcgcgggattgatgtgcaacaagtgtctttggttataaattatgatcta
cctaccaatcgtgaaaactatattcacagaattggcagagggggtcgatttgggaggaaa
ggtgtggctataaactttgttactgaagaagacaagaggattcttcgtgacattgagact
ttctacaatactacagtggaggagatgcccatgaatgtggctgaccttatttaa

>gi568815595f:186753059_186954701|GENSCAN_predicted_peptide_3|370_aa
MAPGCSASGEGLMLPYDMEEKQKDTIRSKSHVSSRGQGKASSDVSALKAHAFCSATKQDK
EDRDLHLRRPAPTKIAGSGPSVDRQGSRGPRAAAPPSLLSLPDRPELFRLRVLELNASDE
RGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKT
TRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKV
SEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSGSFDKLEAVV
KDLIDEGHAATQLVNQLHDVVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCA
TVMQQLSQNC

>gi568815595f:186753059_186954701|GENSCAN_predicted_CDS_3|1113_bp
atggcgccaggctgttcagcttctggtgagggcctcatgctgccttatgacatggaggag
aagcagaaagacactattagaagtaaaagccacgtgtcctcaagagggcaaggcaaagca
tcttcagatgtctctgcccttaaagcacacgcgttctgctctgcgacgaagcaggacaag
gaggacagggacctgcacctccggaggcccgcacctacgaagatagcgggctcgggacct
tcggtggaccggcagggttccagaggcccgcgcgccgccgccccgccctcattgctgagc
ctgccagataggcctgaacttttccgattaagagttcttgagttaaatgcatctgatgaa
cgtggaatacaagtagttcgagagaaagtgaaaaattttgctcaattaactgtgtcagga
agtcgctcagatgggaagccgtgtccgccttttaagattgtgattctggatgaagcagat
tctatgacctcagctgctcaggcagctttaagacgtaccatggagaaggagtcgaaaacc
acccgattctgtcttatctgtaactatgtcagtcgaataattgaacccctgacctctaga
tgttcaaaattccgcttcaagcctctgtcagataaaattcaacagcagcgattactagac
attgccaagaaggaaaatgtcaaaattagtgatgagggaatagcttatcttgttaaagtg
tcagaaggagacttaagaaaagccattacatttcttcaaagcgctactcgattaacaggt
ggaaaggagatcacagagaaagtgattacagacattgccggggtaataccagctgagaaa
attgatggagtatttgctgcctgtcagagtggctcttttgacaaactagaagctgtggtc
aaggatttaatagatgagggtcatgcagcaactcagctcgtcaatcaactccatgatgtg
gttgtagaaaataacttatctgataaacagaagtctattatcacagaaaaacttgccgaa
gttgacaaatgcctagcagatggtgctgatgaacatttgcaactcatcagcctttgtgca
actgtgatgcagcagttatctcagaattgttaa

>gi568815595f:186753059_186954701|GENSCAN_predicted_peptide_4|267_aa
MVSDANSEGSKNSAGIYSGCPGIIRSTEAMDTQGMVKVVAPSVLPFLPHRAFSKIDGHSS
VLTAPGIRGPQGWMTSLKRNLSGFPAAAPKSRLEDEGCSSREFSSMDTFEGYEGAEDMEK
LDDSHETCSSKSAFLERRESTQGEKEERDEEATATGSTKKERAGASTPADSCGGDGWFPG
EGAAPEDLHPGELPSLRSPRLPGSRAPAFPREAMWGPGPCPATQKAAGAAAAAERGRPGP
PPGSPRGALRARLAPAARRRTSRDGDP

>gi568815595f:186753059_186954701|GENSCAN_predicted_CDS_4|804_bp
atggtgagtgatgcaaacagcgagggctctaagaattcagcagggatctacagtggatgc
cccggcatcatccggagcacagaggccatggacactcaggggatggtcaaggtcgtagct
ccctccgttcttccgttcctccctcacagagctttcagcaagatagatggtcattcttct
gtcctcactgctcccggcataaggggaccccagggctggatgacttccctaaagaggaat
ctctcagggtttcctgcagccgctcccaagtcccgtctggaggatgaaggctgctccagc
agggagtttagctccatggacacctttgaaggctatgaaggtgcagaagacatggaaaag
ttggatgacagtcacgaaacctgttcctccaaatccgctttcctggagaggagagaaagc
acccagggagaaaaagaagaacgcgatgaggaagcaacggcgaccggcagcaccaagaag
gagcgtgctggggcgtccacgccggctgactcctgcgggggcgacggctggtttccaggc
gagggcgcggcgcccgaggacctccaccccggagagctgccctccctgcggtcgccccgg
ctccccggctccagagcgcccgcattcccgagagaggcgatgtgggggcccgggccctgc
ccagctacgcagaaagcagccggggccgcggcggcggcagaaaggggacgcccagggccg
cctcccgggagcccgaggggtgccctgcgtgctcgtctagctcccgccgcccggcgaagg
acctcgcgggacggggacccctag

>gi568815595f:186753059_186954701|GENSCAN_predicted_peptide_5|251_aa
MWIPGLRMLLLGAVLLLLALPGHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAP
GRDGRDGTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRS
AFSVGLETYVTIPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKDVKV
SLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADNDNDST
FTGFLLYHDTN

>gi568815595f:186753059_186954701|GENSCAN_predicted_CDS_5|756_bp
atgtggattccagggctcaggatgctgttgctgggagctgttctactgctattagctctg
cccggtcatgaccaggaaaccacgactcaagggcccggagtcctgcttcccctgcccaag
ggggcctgcacaggttggatggcgggcatcccagggcatccgggccataatggggcccca
ggccgtgatggcagagatggcacccctggtgagaagggtgagaaaggagatccaggtctt
attggtcctaagggagacatcggtgaaaccggagtacccggggctgaaggtccccgaggc
tttccgggaatccaaggcaggaaaggagaacctggagaaggtgcctatgtataccgctca
gcattcagtgtgggattggagacttacgttactatccccaacatgcccattcgctttacc
aagatcttctacaatcagcaaaaccactatgatggctccactggtaaattccactgcaac
attcctgggctgtactactttgcctaccacatcacagtctatatgaaggatgtgaaggtc
agcctcttcaagaaggacaaggctatgctcttcacctatgatcagtaccaggaaaataat
gtggaccaggcctccggctctgtgctcctgcatctggaggtgggcgaccaagtctggctc
caggtgtatggggaaggagagcgtaatggactctatgctgataatgacaatgactccacc
ttcacaggctttcttctctaccatgacaccaactga

>gi568815595f:186753059_186954701|GENSCAN_predicted_peptide_6|186_aa
MCQGHKTIVGRGLADKHVNKGLCIIDKPGRQSETVSQKKKKKEREKEKRKRKRRNKKKKE
EKEKERKRKRRKKKKKEEKEKEKEKRKKKERERERKRKRKKRKKKKKRKKKKKKKKKKII
PHIFLNLKPPRFVLCRVGSISLLVSDNGDVNEMIIDMATIRFLNLFPTFPPFPFHKTAIV
IMARSQ

>gi568815595f:186753059_186954701|GENSCAN_predicted_CDS_6|561_bp
atgtgtcagggtcacaagacaatagtggggagagggttagcagacaaacacgtgaacaaa
ggtctttgcatcatagacaagcctgggcgacagagcgagactgtgtctcaaaaaaaaaaa
aagaaggagagggagaaggagaagaggaagaggaagaggaggaacaagaagaagaaggaa
gagaaggagaaggagaggaagaggaagaggaggaagaagaagaagaaggaggagaaggaa
aaggagaaggagaagaggaagaagaaggagagggagagggagaggaagaggaagaggaag
aagaggaagaagaagaagaagaggaagaagaagaagaagaagaagaagaagaagattatt
cctcacatcttcctcaacctcaagcctcccagatttgtcctatgcagagtgggcagcatc
tccctcttggtgagtgacaatggagatgtcaatgagatgatcattgacatggcaaccatc
cgatttctcaatcttttccccacctttcccccctttccattccacaaaaccgccattgtc
atcatggcccgttctcaatga

>gi568815595f:186753059_186954701|GENSCAN_predicted_peptide_7|119_aa
MAFKDTGKAPVEPEVAIHRIRITLTSRSVKSLEKVGADLIRGAKAKNLKVKGGVRMPSKT
LRITTRKTPCGEGSKTWDRFQMRIHKRLFDLHSPSEIVKQITSISTEPGVEVEVTIADA

>gi568815595f:186753059_186954701|GENSCAN_predicted_CDS_7|360_bp
atggcttttaaggataccggaaaagcacccgtggagccggaggtggcaattcaccgaatt
cgaatcaccctaacaagccgcagcgtaaaatccttggaaaaggtgggtgctgacttgatc
agaggcgcaaaagcaaagaatctcaaagtgaaaggaggagttcgaatgccttccaagact
ttgagaatcactacaagaaaaactccttgtggtgaaggttctaagacgtgggatcgtttc
cagatgagaattcacaagcgactctttgacttgcacagtccttctgagattgttaagcag
attacttccatcagtactgagccaggagttgaggtggaagtcaccattgcagatgcttaa

>gi568815595f:186753059_186954701|GENSCAN_predicted_peptide_8|248_aa
MCFAKKHNKKSLKKMQANSAEAMSAHAEAIRALVKPKEAKPKIPKDVSHKLNRLAYIPHP
KLGKRARARVAKGLRLCRPKAKAKDQTKVQAAAPASTPAQAPKDYKAEALEEETTCTRKL
LDKDGKMTLDDIISLLPTFNTMNSKSKSNRKKVPSISAFEIQATIREYYKHHCANKLENL
EEMDKFLDTYTLSRLNQEEVESLNRPITGSEIEAVINNLPTKKNPESDGFTAEFYQRYNE
ELVPFLLK

>gi568815595f:186753059_186954701|GENSCAN_predicted_CDS_8|747_bp
atgtgctttgccaagaagcacaacaagaagagcctaaagaagatgcaggccaacagtgcc
gaggccatgagtgcacatgccgaggctatcagggcccttgtgaagcccaaggaggctaag
cccaagatcccaaaggatgtcagccacaagctcaatcgacttgcctacattccccacccc
aagcttgggaagcgtgctcgtgcccgcgttgccaaggggctcaggctgtgccggccaaag
gccaaggccaaggaccaaaccaaggtccaggctgcagctccagcttcaactccagctcag
gctcccaaagattataaagctgaggctctagaagaagaaaccacttgcacaagaaaactt
ctggataaagatggcaaaatgactctagatgacataatctctctcctcccaacatttaac
acaatgaacagcaaaagtaaaagcaacagaaaaaaagtaccatcaatttccgcttttgaa
atacaagctaccatcagagaatactataaacaccactgtgcaaataaactagaaaatcta
gaagaaatggataaattcctggacacatacaccctttcaagactaaaccaggaagaagtc
gagtccctgaatagaccaataacaggctctgaaattgaggcagtaattaataatctacca
accaaaaaaaatccagaatcagacggattcacagccgaattctaccagaggtacaacgag
gagctggtaccattccttttgaaatga

>gi568815595f:186753059_186954701|GENSCAN_predicted_peptide_9|85_aa
MAKNYGLAQWLMPVIPALWEADVGGLPEERKGSALNTVGALDSSTEDHREVVKGTAFLKL
KLEARHCTKENSINQQTDADLQRLQ

>gi568815595f:186753059_186954701|GENSCAN_predicted_CDS_9|258_bp
atggccaagaattacggcctggcgcagtggctcatgcctgtaatcccagcactttgggag
gccgatgtgggcggattgcctgaggaaagaaagggatcagccttaaacacggtgggtgcc
ctcgattccagcacagaggaccatcgagaggttgtaaagggtacagcattcctaaaatta
aagctggaagctcggcactgtactaaggaaaactccatcaaccaacagacggatgcagat
ttacaaagactgcaatga