GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:37:33

Sequence gi568815595r:131362726_131602821 : 240096 bp : 39.79% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    631    841  211  1  1  126   55   125 0.970   8.78
 1.02 PlyA +   1774   1779    6                               1.05

 2.00 Prom +  16476  16515   40                              -2.05
 2.01 Init +  19080  19217  138  2  0  103   85   250 0.970  24.39
 2.02 Intr +  19321  19590  270  0  0  127   59   518 0.999  49.62
 2.03 Term +  20437  20616  180  0  0  135   44   140 0.999  10.93
 2.04 PlyA +  21937  21942    6                               1.05

 3.00 Prom +  27328  27367   40                              -4.55
 3.01 Init +  34545  34566   22  2  1   74  106     9 0.007   0.92
 3.02 Intr +  45436  47605 2170  2  1   46   53   740 0.032  52.67
 3.03 Intr +  58900  58993   94  1  1   96  110    35 0.639   5.55
 3.04 Term +  69967  70281  315  0  0   53   42   189 0.754   4.76
 3.05 PlyA +  70441  70446    6                               1.05

 4.08 PlyA -  70603  70598    6                               1.05
 4.07 Term -  79124  79066   59  0  2  129   49    59 0.135   2.97
 4.06 Intr - 100150 100024  127  1  1   91   78   127 0.418  11.33
 4.05 Intr - 108554 108446  109  1  1   56   59    79 0.434   1.17
 4.04 Intr - 125015 124955   61  0  1   56   61    79 0.012  -1.13
 4.03 Intr - 127355 127256  100  2  1   90   91    99 0.476   9.16
 4.02 Intr - 135552 135454   99  0  0   99   58    48 0.390   2.29
 4.01 Init - 137755 137705   51  1  0   83  110    30 0.554   5.91
 4.00 Prom - 138754 138715   40                              -8.45

 5.00 Prom + 138986 139025   40                              -5.55
 5.01 Init + 139447 139495   49  0  1   66   55     6 0.442  -3.74
 5.02 Term + 139927 140363  437  2  2   70   44   487 0.682  36.96
 5.03 PlyA + 140414 140419    6                               1.05

 6.00 Prom + 148187 148226   40                              -8.05
 6.01 Init + 149147 149210   64  1  1   47  111    61 0.164   5.66
 6.02 Intr + 155109 155184   76  1  1  107  107    75 0.702   8.95
 6.03 Term + 155992 156220  229  1  1   65   44   146 0.911   3.02
 6.04 PlyA + 156252 156257    6                               1.05

 7.00 Prom + 157607 157646   40                              -6.65
 7.01 Init + 163734 163884  151  2  1   70   65   115 0.277   7.65
 7.02 Intr + 164520 164608   89  1  2   58   67   128 0.734   6.47
 7.03 Term + 167013 167105   93  2  0   93   39   100 0.780   2.45
 7.04 PlyA + 168040 168045    6                               1.05

 8.03 PlyA - 168169 168164    6                               1.05
 8.02 Term - 172604 172470  135  2  0  121   43   144 0.972  10.24
 8.01 Init - 180023 179832  192  2  0   99   34   289 0.931  21.61
 8.00 Prom - 180274 180235   40                              -7.55

 9.15 PlyA - 180576 180571    6                               1.05
 9.14 Term - 181297 181034  264  1  0  102   38   135 0.681   4.42
 9.13 Intr - 187355 187222  134  0  2   89   99   149 0.993  15.54
 9.12 Intr - 189766 189715   52  1  1   59  103    55 0.127   1.66
 9.11 Intr - 192826 192772   55  0  1   87  113    14 0.089   1.86
 9.10 Intr - 201624 201491  134  0  2  125  110    92 0.995  13.62
 9.09 Intr - 202045 201918  128  2  2   45   85    38 0.752  -1.32
 9.08 Intr - 204418 204321   98  0  2   58   94    80 0.678   4.33
 9.07 Intr - 206345 206057  289  0  1   62   66    88 0.195  -0.62
 9.06 Intr - 208802 208709   94  2  1   14   68   107 0.111  -0.08
 9.05 Intr - 212405 212346   60  2  0  108   98    25 0.631   3.51
 9.04 Intr - 218940 218854   87  0  0  100   95    68 0.731   7.95
 9.03 Intr - 224857 224759   99  1  0   77   88    59 0.571   4.19
 9.02 Intr - 226647 226516  132  0  0   71   74    41 0.420   0.92
 9.01 Init - 236059 235988   72  1  0   47   83    75 0.365   4.02

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:131362726_131602821|GENSCAN_predicted_peptide_1|70_aa
XCWAWCECPCTLHDGVGGLPIFLENCFIGAAWEQLLDTLQDLGVVEAGAFSGLQIPVRLR
QPSVDSGNLS

>gi568815595r:131362726_131602821|GENSCAN_predicted_CDS_1|213_bp
nngtgctgggcctggtgtgagtgcccctgtaccctgcatgatggtgtgggaggcctgccc
atctttctggagaattgctttattggtgctgcctgggagcagttactggataccctccag
gacttgggagtggtggaagctggtgctttctcaggacttcagatcccagttcgtctgagg
caaccctctgtggactcagggaacctgagctga

>gi568815595r:131362726_131602821|GENSCAN_predicted_peptide_2|195_aa
MAGARRLELGEALALGSGWRHACHALLYAPDPGMLFGRIPLRYAILMQMRFDGRLGFPGG
FVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTLEEL
LAVEAGATRAKDHGLEVLGLVRVPLYTLRDGVGGLPTFLENSFIGSAREQLLEALQDLGL
LQSGSISGLKIPAHH

>gi568815595r:131362726_131602821|GENSCAN_predicted_CDS_2|588_bp
atggccggagcccgcaggctggagctaggcgaggccctggcgctggggtcgggctggcgt
catgcgtgccacgctctcctctacgcgccggaccctgggatgctcttcggccgcatcccg
ctgcgctacgccatactgatgcagatgcgcttcgatggacgcctgggcttccccggcgga
ttcgtggacacgcaggacagaagcctagaggacgggctgaaccgcgagctgcgcgaggag
ctgggcgaagcggctgccgctttccgcgtggagcgcactgactaccgcagctcccacgtc
gggtcagggccacgcgttgtggcccacttctatgccaagcgtctgacgctcgaggagctg
ttggctgtggaggccggcgcaacacgcgccaaggaccacgggctggaggtgctgggcctg
gtgcgagtgcccctgtataccctgcgggatggtgtaggaggcctgcctaccttcctggag
aattcctttattggctctgcgcgggagcagttacttgaagctctccaggacttgggactg
ctgcagtctggctctatttcaggccttaagattccagctcatcactag

>gi568815595r:131362726_131602821|GENSCAN_predicted_peptide_3|866_aa
MDRKKRVEIQTTIREYYKHLYTNKLENLEEMDTFLDTYTLPRLNEEEVESLNRPITGSEI
VAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIP
KPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRK
SINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPT
ANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLS
LFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELP
FTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAIL
PKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLY
YKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCWE
NWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGVGKDFMSKT
PKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTTWEKIFATYSSDKGLISRIYNELK
QIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMRYHLTPVR
MAIIKKSGNNRLMGSSTATWVFSLQWVSENLCHKFWAWGSGQTSKTSQEGQGQTSPDCKD
YNKYLTLQCPDISEHPQALTIQKNMTSPNILNKAPVTNPRVTKICDFSDRKFKIAVLRKL
NEIQDNTEKHSRILSDKLNKEIEIIF

>gi568815595r:131362726_131602821|GENSCAN_predicted_CDS_3|2601_bp
atggacaggaagaaaagggtggaaatacaaactaccatcagagaatactacaaacacctc
tacacaaataaactagaaaatctagaagaaatggatacattcctcgacacatacactctc
ccaagactaaacgaggaagaagttgaatctctgaatagaccaataacaggctctgaaatt
gtggcaataatcaatagtttaccaaccaaaaagagtccaggaccagatggattcacagcc
gaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatca
atagaaaaagagggaatcctccctaactcattttatgaggccagcatcattctgatacca
aagccgggcagagacacaaccaaaaaagagaattttagaccaatatccttgatgaacatt
gatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagctt
atccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaa
tcaataaatgtaatccagcatataaacagagccaaagacaaaaaccacatgattatctca
atagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaat
aaattaggtattgatgggacgtatttcaaaataataagagctatctatgacaaacccaca
gccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggcacaaga
cagggatgccctctctcaccgctcctattcaacatagtgttggaagttctggccagggca
atcaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtcc
ctgtttgcagacgacatgattgtttatctagaaaaccccatcgtctcagcccaaaatctc
cttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatca
caagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactccca
ttcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaag
gacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggacacaaacaaa
tggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactg
cccaaggtaatttacagattcaatgccatccccatcaagctaccaatgactttcttcaca
gaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcatcgccaag
tcaatcctaagccaaaagaacaaagcgggaggcatcacactacctgacttcaaactatac
tacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaa
tggaacagaacagagccctcagaaataatgccacatatctacaactatctgatctttgac
aaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaa
aactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaa
atcaattcaagatggattaaagatttaaacgttagacctaaaaccataaaaaccctagaa
gaaaacctaggcattaccattcaggacataggcgtgggcaaggacttcatgtccaaaaca
ccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagc
ttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaacatgggagaaa
attttcgcaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaa
caaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaaggacatgaacaga
cacttctcaaaagaagacatttatgcagccaaaaaacacatgaagaaatgctcatcatca
ctggccatcagagaaatgcaaatcaaaaccactatgagatatcatctcacaccagttaga
atggcaatcattaaaaagtcaggaaacaacaggttgatgggatcttctacggccacttgg
gtgttctcccttcagtgggtatcagagaatctttgccataaattttgggcatggggtagt
ggacagacatcaaagacttctcaagaaggacaggggcaaacaagcccagactgcaaagac
tacaataaatacctaactcttcaatgcccagacatcagtgaacatccacaagcattgacc
atccagaaaaacatgacctcaccaaacatactaaataaggcaccagtgaccaatcctaga
gtgacaaagatatgtgacttttcagacagaaaattcaaaatagctgttttgaggaagctc
aatgaaattcaagataacacagagaaacattccagaatcctgtcagataaacttaacaaa
gagattgaaataattttttaa

>gi568815595r:131362726_131602821|GENSCAN_predicted_peptide_4|201_aa
MPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYR
ELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKG
QPATHGQTKTHRRPGAVATGVKDSKLPAYKDLGKNLPFPTYFPDGDEEELPEDLYDENVC
QPGPPNPSTVIAPTDPVAKAP

>gi568815595r:131362726_131602821|GENSCAN_predicted_CDS_4|606_bp
atgcctttatggaccaaggatggtcaaaagcatgtggtcacattacttcaggtacaagac
tgtcatgtcttaaaatatacgtcaaaggaaaactgtaatggaaaaatggcaaccctgtct
gtaggaggaaaaactgtatcacgttttcgtaaagctacatccatattggaattttaccgg
gaacttggattgccgccgaaacagacagttaaaatctttaatataacagataatgctgca
attaaaccaggcactcctctttatgctgctcactttcgtccaggacagtatgtggatgtc
acagccaaaactattggtaaaggttttcaaggtgtcatgaaaagatggggatttaaaggc
cagcctgctacgcatggtcaaacgaaaacccacaggagacctggagctgttgcaactggt
gtcaaagattctaaactgcctgcatataaggatctcggtaaaaatctaccattccctaca
tattttcctgatggagatgaagaggaactgccagaagatttgtatgatgaaaacgtgtgt
cagcccgggcctcccaaccccagcactgtgattgcccccacagacccagtagcaaaggct
ccatag

>gi568815595r:131362726_131602821|GENSCAN_predicted_peptide_5|161_aa
MTSEQVNIPRKTLVGGGEAQLHQAIPLLQDATVQVGHPHTFLPVPRAQGSTQAVPESTQH
LGADLRQQPPTRHGLAREDSTHDFRAPCRSAFRESPRHRHVDAVAVGKFSQWPPERSPAD
ALCDGKKAAGPTSGAFYNELRALESLPGNYSSASTVVLLWM

>gi568815595r:131362726_131602821|GENSCAN_predicted_CDS_5|486_bp
atgacctctgaacaggtgaacataccaagaaagaccttagtgggcggaggggaggcccaa
ctgcaccaggccattccactgcttcaggacgcaactgtgcaggtaggacaccctcacacc
ttcctacctgttccccgggcccagggcagcacccaggccgtccccgagtcgacccagcac
ctgggcgccgacctgcgtcagcagcctccaacccggcatggattagcccgggaagactcg
actcacgacttccgggcgccctgccgctctgctttcagggagtccccacgccaccgccac
gtggacgcagtagccgtggggaagttttcgcaatggccgccggaacggtcgccggccgat
gctctctgcgacggaaagaaagccgccggacccacttccggtgcgttttacaatgaactc
cgggcactcgagtcgctccccggaaactatagttctgcttccaccgttgtcctactttgg
atgtga

>gi568815595r:131362726_131602821|GENSCAN_predicted_peptide_6|122_aa
MRKGLTEIMGAVPEALRQYSPEHQDKNLSLRGTHSVAEKTKEVNRRSGKDWAADVGPVGG
MDRLQGGERALLAFRGHAVTVVPPFVVLDSNQAFQDRHGNLPICAAELRRDRIPLVTKEP
GR

>gi568815595r:131362726_131602821|GENSCAN_predicted_CDS_6|369_bp
atgagaaagggcttgactgaaataatgggggctgttcctgaagccttgaggcagtacagc
ccagagcatcaagacaaaaatctcagtcttcgaggaactcacagtgtagcagaaaagaca
aaggaggtaaacaggaggagtggcaaggactgggcagctgatgtgggtccagtaggagga
atggacaggctgcaagggggagaaagggcactgctagctttcaggggtcatgcggtgaca
gtggtccctccatttgtggtattagactccaaccaggcctttcaggatcgtcatggcaac
ttacccatctgtgccgctgagctgagacgagacaggattcccttagtaaccaaggagccc
gggagatga

>gi568815595r:131362726_131602821|GENSCAN_predicted_peptide_7|110_aa
MMTVGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRAPLRSFCGEP
LLYARTAAMSVDAMPGVNDWLIASKKTGTSVLQLQPTTGVSLEADSFQSI

>gi568815595r:131362726_131602821|GENSCAN_predicted_CDS_7|333_bp
atgatgacagtaggagttgagtggaggagatggcaagttgagcggaggaggtggcagtgg
ggccccagatcaggtgcctccatggcaggctctgaagagctggggctccgggaagacacg
ctgagggtcctagctgccttccttaggcgtgctccactgcgttcgttctgtggtgagccc
ttgctgtatgcccggactgcagccatgagtgtggacgctatgcctggcgtcaatgactgg
ctgatagccagcaagaaaacagggacttcagttctgcaactgcaaccaacaaccggagtg
agcttggaagcagattctttccagagcatctag

>gi568815595r:131362726_131602821|GENSCAN_predicted_peptide_8|108_aa
MADTREAIVHASHLPMSVIIVGVGNADFSDMQMLDGDDGILRSPKGEPVLRDIVQFVPFR
NFKHASPAALAKSVLAEVPNQVVDYYNGKGIKPKCSSEMYESSRTLAP

>gi568815595r:131362726_131602821|GENSCAN_predicted_CDS_8|327_bp
atggccgacacccgggaggccattgtccatgcctcccacctccccatgtcagtcatcatc
gtgggagtagggaacgctgacttcagtgacatgcagatgctggacggtgatgatgggatt
ctgaggtcacccaagggagagcctgttcttcgagacatcgtccagttcgtgcccttcagg
aacttcaaacacgcatctccagctgccctggcaaagagcgtgctggctgaagtcccaaac
caagttgtggactattacaatggcaaaggaattaaaccaaaatgttcatcagaaatgtat
gaatcttccagaacactagcaccatga

>gi568815595r:131362726_131602821|GENSCAN_predicted_peptide_9|565_aa
MWLDIVELAGKKQKKEKGKSAIGKPDASFHSFCPWTSESRFFGLWTLGLASVASWGLSDL
QPQTEACTCIVWDWDSNGKHDFIGEFTSTFKEMRGAMEGKQVQWECINPKYKAKKKNYKN
SGTVILNLCKIHKMHSFLDYIMGGCQIQFTSIVDLVREIREATAAVGKMMNLALDTSEVL
SESFLKIEKNKNVTLFKKWSRPNSMFTYKVHCIGPNCTQLFKKKRKKAPQECGPKGRLQV
QLTRGCYTAASLRKRREGSQMTCLADEGKGSEEWGCFITPLTLQEFQSDNQHMGQIVSFS
IKRQKHDAFREFGFKGSYLCRVDGIVLPRECRSLFLVNCEIGGQIFYPYSCCLVAIDFTA
SNGDPRNSCSLHYIHPYQPNEYLKALVAVGEICQDYDSDKMFPAFGFGARIPPEYTVSHD
FAINFNEDNPECAGIQGVVEAYQSCLPKLQLYGPTNIAPIIQKVAKSASEETNTKEASAP
EHFPRLPCAAEYSTFPPIPISAESSSSFPDGKGPGRLQARSQDLKQEAMGALQPSASVPG
EELPPLWHMAFRGRDCNPDPLIAGL

>gi568815595r:131362726_131602821|GENSCAN_predicted_CDS_9|1698_bp
atgtggttggacatcgtagaattagctggtaaaaaacaaaagaaggaaaaaggaaaaagt
gccattggaaagccagatgcttccttccactctttctgcccttggacatcagaatccaga
ttctttggcctttggactctaggacttgcatcagtggcttcctgggggctctcagacctt
cagccacagactgaagcctgcacttgcatagtatgggactgggactccaatggcaagcat
gacttcattggagaattcacctcgacattcaaggagatgagaggagcaatggaagggaaa
caggtgcagtgggagtgcatcaatcccaagtacaaagccaagaagaagaattacaagaac
tcaggcactgtgattctgaatctgtgcaagattcacaagatgcattctttcttggactac
atcatgggtggctgccaaatccagtttacaagcatagtggacctggtcagggaaatacgc
gaggcaacagcagctgtaggcaagatgatgaatttggctttggacacgtcagaggtactt
tcagaaagttttctgaaaatagaaaagaataaaaatgtaacattatttaagaaatggtcc
agaccaaacagtatgttcacctacaaggttcattgtataggtccaaattgtacacagcta
tttaaaaagaaaagaaagaaagctccccaagaatgtggtcccaaaggtagactgcaggta
caactaaccagaggttgttacacagcagcttcccttagaaaacgtcgagaaggttcacaa
atgacctgtttggcagatgaagggaagggatctgaggagtggggttgtttcataacaccc
ttaacacttcaggagtttcagtcagacaaccagcacatgggacagattgttagctttagt
atcaagaggcagaagcatgatgccttcagagaatttggttttaagggatcttacctatgc
cgcgtagatggaattgttctgcccagggagtgtagaagtcttttcttagtgaactgtgaa
attggagggcagatattctatccttactcttgctgcctggtagctatagatttcactgcc
tcaaacggggaccccaggaacagctgttccttgcactacatccacccttaccaacccaat
gagtatctgaaagctttggtagctgtgggggagatttgccaagactatgacagtgacaaa
atgttccctgcctttgggtttggcgccaggatacctccagagtacacggtctctcatgac
tttgcaatcaactttaatgaagacaacccagaatgtgcaggaattcaaggagttgtggaa
gcctatcagagctgtcttcctaagctccaactctacggtcccaccaacattgcccccatc
atccagaaggttgccaagtcagcgtcagaggaaactaacaccaaggaggcatcggcccca
gagcactttccaaggcttccctgtgctgctgagtacagcacctttcctccaattcccatc
tctgctgagtcatcttccagctttccagatggaaaggggccaggcaggctgcaggccaga
agtcaggacttaaagcaggaagccatgggagcactgcaaccttctgcaagtgtgcctgga
gaagagctgccacctttgtggcacatggccttcagagggagagactgcaaccctgaccct
cttatagcaggactttag