GENSCAN 1.0	Date run: 10-Mar-117	Time: 10:43:25

Sequence gi568815595f:122154190_122385188 : 230999 bp : 40.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   1132   1707  576  0  0   10   42   212 0.513   4.72
 1.02 PlyA +   1718   1723    6                               1.05

 2.05 PlyA -   3482   3477    6                               1.05
 2.04 Term -  15369  15223  147  0  0  105   40    82 0.335   2.02
 2.03 Intr -  18328  18215  114  1  0   54   58   123 0.352   5.62
 2.02 Intr -  30381  30220  162  0  0   89   42   135 0.470   8.25
 2.01 Init -  47298  47209   90  0  0   83   59    53 0.161   2.44
 2.00 Prom -  54345  54306   40                              -5.65

 3.00 Prom +  64871  64910   40                              -2.15
 3.01 Sngl +  69100  69303  204  0  0   61   47   173 0.762   5.44
 3.02 PlyA +  69381  69386    6                               1.05

 4.00 Prom +  70910  70949   40                              -4.75
 4.01 Init +  73147  73231   85  0  1   88   48    80 0.373   5.16
 4.02 Term +  73389  73555  167  1  2   17   49   230 0.848   9.10
 4.03 PlyA +  73718  73723    6                               1.05

 5.04 PlyA -  74136  74131    6                               1.05
 5.03 Term -  76222  76013  210  1  0   23   44   223 0.786   7.71
 5.02 Intr -  76590  76426  165  0  0   57   94   127 0.035   9.44
 5.01 Init -  85033  84881  153  1  0   11   76   121 0.009   3.52
 5.00 Prom -  94629  94590   40                              -7.25

 6.00 Prom +  99604  99643   40                              -2.35
 6.01 Init + 100001 100185  185  1  2   90  110   118 0.998  10.90
 6.02 Intr + 102892 103198  307  1  1  123   78   215 0.993  19.53
 6.03 Intr + 107339 108223  885  1  0  125   96   887 0.847  83.78
 6.04 Intr + 121623 121853  231  2  0  109   92   297 0.978  29.25
 6.05 Intr + 127924 128047  124  0  1  131  110    86 0.998  14.34
 6.06 Term + 129498 131002 1505  1  2   63   38  1823 0.996 164.49
 6.07 PlyA + 131183 131188    6                              -0.45

 7.00 Prom + 131769 131808   40                              -5.95
 7.01 Init + 132771 132819   49  2  1   93   61   117 0.558  10.66
 7.02 Intr + 138738 138882  145  1  1   88   36   151 0.920   8.32
 7.03 Intr + 142051 142219  169  1  1   66   24   128 0.033   3.23
 7.04 Intr + 157461 157491   31  2  1   88   83    35 0.027  -0.21
 7.05 Term + 161054 161322  269  0  2   10   54   240 0.102   7.47
 7.06 PlyA + 161335 161340    6                               1.05

 8.00 Prom + 161427 161466   40                              -9.35
 8.01 Init + 163618 163805  188  0  2   55    8   211 0.477   8.38
 8.02 Intr + 164141 164349  209  2  2   26   69   231 0.103  12.80
 8.03 Intr + 171072 171169   98  1  2   66  113    75 0.020   6.61
 8.04 Intr + 183358 183459  102  0  0  109   72   116 0.997  11.55
 8.05 Term + 187250 187378  129  1  0  109   43   132 0.996   8.00
 8.06 PlyA + 187454 187459    6                               1.05

 9.06 PlyA - 187509 187504    6                               1.05
 9.05 Term - 205730 205680   51  2  0   93   43    89 0.847   1.35
 9.04 Intr - 208838 208779   60  2  0  116   70    37 0.639   2.71
 9.03 Intr - 214133 213987  147  2  0   84  115    57 0.982   7.51
 9.02 Intr - 217611 217486  126  0  0   17   84    97 0.662   2.16
 9.01 Init - 230078 230022   57  2  0   76   93    53 0.116   5.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  77095  77037   59  1  2   62  115    70 0.878   7.93
S.002 Init + 181148 181174   27  1  0   77  115    -6 0.887   0.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:122154190_122385188|GENSCAN_predicted_peptide_1|191_aa
MKASTIDQAEQLDQAEERILEIEGRSFEITQSDENKGKRIKKNEQSLCDIWDTIKGPNIW
IFCVLESKEKKTKELEKLFNKIIDENFASLARDLDIQIQEAQRSSNRYNSRRSSPQHIIV
KLSKPKTKRRILKSAREKHLGIYKGILIRVTADFSAEILQSRREWNNISKVLKEREKNCG
HEYYTQQSYPS

>gi568815595f:122154190_122385188|GENSCAN_predicted_CDS_1|576_bp
atgaaagcttcaacaatagatcaagcagaacaactagatcaagcagaagaaagaatctta
gaaattgaaggtaggtcttttgaaataactcagtcagatgaaaataaaggaaaaagaata
aaaaagaatgagcaaagcctatgtgacatatgggacaccataaagggaccaaatatttgg
attttttgtgtcctagaaagcaaagaaaaaaaaacaaaagaattagaaaagctatttaat
aaaataatagatgaaaactttgcaagtctagcaagagatttagatatccagatacaggag
gctcagaggtcctcaaatagatacaattcaagaaggtcttctccacagcacattatagtc
aaactgtcaaaaccaaagacaaaaagaagaattctaaaatcagcaagagaaaagcatctg
ggcatttataaaggaatcctcatcagagtaacagcagatttctcagcagaaatcctacag
tccaggagagaatggaataatatatccaaagtactgaaagaaagagaaaaaaactgcggg
cacgaatattatacccagcaaagttatccttcatga

>gi568815595f:122154190_122385188|GENSCAN_predicted_peptide_2|170_aa
MTMAVLWNRKGGKVGKRLRNRMVAVSVWREGRFPPALLGFPGPTCAAARAPSHRGSSGPS
AVGLHEDELWSDLRTARSPAPYAKKLSQPLQPSATTLLISQQPLTAGKTLHQQKENDSLK
AQWLCTMKTLCTWRRESAAIMGLCIGTQYYPATVESNTGQNLAGAHGGSI

>gi568815595f:122154190_122385188|GENSCAN_predicted_CDS_2|513_bp
atgacaatggcagttttgtggaatagaaaagggggaaaggtggggaaaagattgagaaat
cggatggttgctgtgtctgtgtggagagaggggcgctttcctcccgccctccttgggttc
cccggtcctacctgcgccgcggccagggctccctcgcacagaggcagctccggcccctcg
gccgtgggtctccacgaggatgagctctggtctgatctcaggactgcgcgcagccccgct
ccctatgccaagaaattgtcacagccacttcaaccttcagcaacaaccttattgatcagt
cagcagccattaacagcaggcaagactctccaccagcaaaaagaaaacgactcactgaag
gctcagtggctgtgtaccatgaagactctgtgcacttggaggagggagagtgcagcaatt
atgggactttgcattggaactcagtactacccagccacagtggaaagcaacacagggcag
aacttagctggtgcccatggagggagcatttaa

>gi568815595f:122154190_122385188|GENSCAN_predicted_peptide_3|67_aa
MDRPLARLIKKKEKIQINTIGNDKSDITTNRTDIQKILSEYYQNLYAHKLENLEEMDKIL
EIQASQD

>gi568815595f:122154190_122385188|GENSCAN_predicted_CDS_3|204_bp
atggataggccactagctagattaataaagaaaaaagagaagatccaaataaacacaatt
ggaaatgacaaaagtgacattacaaccaaccgcacagacatacaaaaaatccttagcgaa
tattatcaaaacctctatgcacacaaactagaaaacctagaagaaatggataaaatcctg
gaaatccaagcctctcaagattga

>gi568815595f:122154190_122385188|GENSCAN_predicted_peptide_4|83_aa
MAGCRSQALPHGEAAKAREKSSTAAAGPAERTGSSLGQPRKGLPQRSSDLKGSSSTATVG
AKAEEAPRVSEGCEGCQHAVTSQ

>gi568815595f:122154190_122385188|GENSCAN_predicted_CDS_4|252_bp
atggcgggctgcaggtcccaagccctgccccacggggaggcagctaaggcccgtgagaag
tcgagcacagcagctgctggcccagctgagcgaacaggctctagccttggccagcccaga
aaggggctcccacagcgcagcagtgacctgaagggctcctcaagcacggccacagtggga
gccaaggccgaggaggcaccgagagtgagtgagggctgcgagggctgccagcacgctgtc
acctctcagtag

>gi568815595f:122154190_122385188|GENSCAN_predicted_peptide_5|175_aa
MLPGLGLTLQGNGLPSGPWQVQKCCLGAYTWARDPRARLVLHTLVAELVPKLLPSLGFGV
FSCKMTKWYHGLGGSQEAPSMQVEPQWKRLDLEVGSLPGSFPSPAQAVLEQKDLGSIFTP
DVAAASARRRGCFVMRGAKGAFSLDLGSGPHREASSLPLLYWSMRVTPSNSCRQA

>gi568815595f:122154190_122385188|GENSCAN_predicted_CDS_5|528_bp
atgctgccaggcttgggactcacccttcaaggcaatgggctcccctctggcccatggcag
gtccagaaatgctgtctaggagcctacacctgggctcgggacccaagagcccgcttggtg
ctccacacccttgtggctgaactggtacctaagctgcttccttctctgggctttggtgtc
ttctcttgtaagatgaccaagtggtatcacgggcttggtgggtcccaggaagccccttct
atgcaggtggaacctcagtggaagagactggatttggaagtgggctctcttcctggttcc
tttccaagtcctgctcaggctgtgctggagcagaaagatctaggctcgattttcaccccg
gatgtggcggcagcgtcagcaaggaggagaggttgttttgtaatgcgtggcgctaaagga
gcgttttccctggacttgggttctggccctcaccgcgaggcgtcatcgctgcctttgctt
tactggtccatgcgagtgactccttcaaacagctgccggcaagcctag

>gi568815595f:122154190_122385188|GENSCAN_predicted_peptide_6|1078_aa
MAFYSCCWVLLALTWHTSAYGPDQRAQKKGDIILGGLFPIHFGVAAKDQDLKSRPESVEC
IRYNFRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTVSKALEATLSFVAQNKI
DSLNLDEFCNCSEHIPSTIAVVGATGSGVSTAVANLLGLFYIPQVSYASSSRLLSNKNQF
KSFLRTIPNDEHQATAMADIIEYFRWNWVGTIAADDDYGRPGIEKFREEAEERDICIDFS
ELISQYSDEEEIQHVVEVIQNSTAKVIVVFSSGPDLEPLIKEIVRRNITGKIWLASEAWA
SSSLIAMPQYFHVVGGTIGFALKAGQIPGFREFLKKVHPRKSVHNGFAKEFWEETFNCHL
QEGAKGPLPVDTFLRGHEESGDRFSNSSTAFRPLCTGDENISSVETPYIDYTHLRISYNV
YLAVYSIAHALQDIYTCLPGRGLFTNGSCADIKKVEAWQVLKHLRHLNFTNNMGEQVTFD
ECGDLVGNYSIINWHLSPEDGSIVFKEVGYYNVYAKKGERLFINEEKILWSGFSREVPFS
NCSRDCLAGTRKGIIEGEPTCCFECVECPDGEYSDETDASACNKCPDDFWSNENHTSCIA
KEIEFLSWTEPFGIALTLFAVLGIFLTAFVLGVFIKFRNTPIVKATNRELSYLLLFSLLC
CFSSSLFFIGEPQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSFHRKWWG
LNLQFLLVFLCTFMQIVICVIWLYTAPPSSYRNQELEDEIIFITCHEGSLMALGFLIGYT
CLLAAICFFFAFKSRKLPENFNEAKFITFSMLIFFIVWISFIPAYASTYGKFVSAVEVIA
ILAASFGLLACIFFNKIYIILFKPSRNTIEEVRCSTAAHAFKVAARATLRRSNVSRKRSS
SLGGSTGSTPSSSISSKSNSEDPFPQPERQKQQQPLALTQQEQQQQPLTLPQQQRSQQQP
RCKQKVIFGSGTVTFSLSFDEPQKNAMAHRNSTHQNSLEAQKSSDTLTRHEPLLPLQCGE
TDLDLTVQETGLQGPVGGDQRPEVEDPEELSPALVVSSSQSFVISGGGSTVTENVVNS

>gi568815595f:122154190_122385188|GENSCAN_predicted_CDS_6|3237_bp
atggcattttatagctgctgctgggtcctcttggcactcacctggcacacctctgcctac
gggccagaccagcgagcccaaaagaagggggacattatccttggggggctctttcctatt
cattttggagtagcagctaaagatcaagatctcaaatcaaggccggagtctgtggaatgt
atcaggtataatttccgtgggtttcgctggttacaggctatgatatttgccatagaggag
ataaacagcagcccagcccttcttcccaacttgacgctgggatacaggatatttgacact
tgcaacaccgtttctaaggccttggaagccaccctgagttttgttgctcaaaacaaaatt
gattctttgaaccttgatgagttctgcaactgctcagagcacattccctctacgattgct
gtggtgggagcaactggctcaggcgtctccacggcagtggcaaatctgctggggctcttc
tacattccccaggtcagttatgcctcctccagcagactcctcagcaacaagaatcaattc
aagtctttcctccgaaccatccccaatgatgagcaccaggccactgccatggcagacatc
atcgagtatttccgctggaactgggtgggcacaattgcagctgatgacgactatgggcgg
ccggggattgagaaattccgagaggaagctgaggaaagggatatctgcatcgacttcagt
gaactcatctcccagtactctgatgaggaagagatccagcatgtggtagaggtgattcaa
aattccacggccaaagtcatcgtggttttctccagtggcccagatcttgagcccctcatc
aaggagattgtccggcgcaatatcacgggcaagatctggctggccagcgaggcctgggcc
agctcctccctgatcgccatgcctcagtacttccacgtggttggcggcaccattggattc
gctctgaaggctgggcagatcccaggcttccgggaattcctgaagaaggtccatcccagg
aagtctgtccacaatggttttgccaaggagttttgggaagaaacatttaactgccacctc
caagaaggtgcaaaaggacctttacctgtggacacctttctgagaggtcacgaagaaagt
ggcgacaggtttagcaacagctcgacagccttccgacccctctgtacaggggatgagaac
atcagcagtgtcgagaccccttacatagattacacgcatttacggatatcctacaatgtg
tacttagcagtctactccattgcccacgccttgcaagatatatatacctgcttacctggg
agagggctcttcaccaatggctcctgtgcagacatcaagaaagttgaggcgtggcaggtc
ctgaagcacctacggcatctaaactttacaaacaatatgggggagcaggtgacctttgat
gagtgtggtgacctggtggggaactattccatcatcaactggcacctctccccagaggat
ggctccatcgtgtttaaggaagtcgggtattacaacgtctatgccaagaagggagaaaga
ctcttcatcaacgaggagaaaatcctgtggagtgggttctccagggaggtgcccttctcc
aactgcagccgagactgcctggcagggaccaggaaagggatcattgagggggagcccacc
tgctgctttgagtgtgtggagtgtcctgatggggagtatagtgatgagacagatgccagt
gcctgtaacaagtgcccagatgacttctggtccaatgagaaccacacctcctgcattgcc
aaggagatcgagtttctgtcgtggacggagccctttgggatcgcactcaccctctttgcc
gtgctgggcattttcctgacagcctttgtgctgggtgtgtttatcaagttccgcaacaca
cccattgtcaaggccaccaaccgagagctctcctacctcctcctcttctccctgctctgc
tgcttctccagctccctgttcttcatcggggagccccaggactggacgtgccgcctgcgc
cagccggcctttggcatcagcttcgtgctctgcatctcatgcatcctggtgaaaaccaac
cgtgtcctcctggtgtttgaggccaagatccccaccagcttccaccgcaagtggtggggg
ctcaacctgcagttcctgctggttttcctctgcaccttcatgcagattgtcatctgtgtg
atctggctctacaccgcgcccccgtcaagctaccgcaaccaggagctggaggatgagatc
atcttcatcacgtgccacgagggctccctcatggccctgggcttcctgatcggctacacc
tgcctgctggctgccatctgcttcttctttgccttcaagtcccggaagctgccggagaac
ttcaatgaagccaagttcatcaccttcagcatgctcatcttcttcatcgtctggatctcc
ttcattccagcctatgccagcacctatggcaagtttgtctctgccgtagaggtgattgcc
atcctggcagccagctttggcttgctggcgtgcatcttcttcaacaagatctacatcatt
ctcttcaagccatcccgcaacaccatcgaggaggtgcgttgcagcaccgcagctcacgct
ttcaaggtggctgcccgggccacgctgcgccgcagcaacgtctcccgcaagcggtccagc
agccttggaggctccacgggatccaccccctcctcctccatcagcagcaagagcaacagc
gaagacccattcccacagcccgagaggcagaagcagcagcagccgctggccctaacccag
caagagcagcagcagcagcccctgaccctcccacagcagcaacgatctcagcagcagccc
agatgcaagcagaaggtcatctttggcagcggcacggtcaccttctcactgagctttgat
gagcctcagaagaacgccatggcccacaggaattctacgcaccagaactccctggaggcc
cagaaaagcagcgatacgctgacccgacacgagccattactcccgctgcagtgcggggaa
acggacttagatctgaccgtccaggaaacaggtctgcaaggacctgtgggtggagaccag
cggccagaggtggaggaccctgaagagttgtccccagcacttgtagtgtccagttcacag
agctttgtcatcagtggtggaggcagcactgttacagaaaacgtagtgaattcataa

>gi568815595f:122154190_122385188|GENSCAN_predicted_peptide_7|220_aa
MWERDCEQKVVTQDDPTVVDPQDAVLEAELHLAFYYEGEPAGRGDGKTAGTCTAGEGATG
ECGNNHFPPTVTTLLLRYESPLVLVGVRVKSDWQDPVAVVPTPIAMAPSSKICLTILPSA
WTLHNAAEDKKHPSGHTHKQLDIKRNTPMVEDTSGWKLRGTHPRKSTPTGTDRFRQAIDW
WNNAEFGWGGRRRAQLPGSPIAGENHLPTPAPFWPSHLPR

>gi568815595f:122154190_122385188|GENSCAN_predicted_CDS_7|663_bp
atgtgggagcgcgactgtgagcagaaggtggtgactcaggatgacccaactgtggtagat
ccacaagatgctgtgctggaggctgaactacacctggcattttactatgagggagaacct
gctggcagaggagatggaaagacagcgggaacttgcactgcaggggagggtgctacaggg
gagtgtggcaacaatcattttccacccacagtcaccaccctgctccttcgctacgaatcc
ccacttgtactggttggggtcagagttaagtctgattggcaagaccctgttgcagtggtc
cctacacctattgccatggccccctccagtaaaatctgcctgaccatcttgcctagtgct
tggacccttcacaatgcagctgaggacaaaaaacatcctagcgggcacacacacaagcag
ctggacatcaagaggaacacaccaatggttgaggacacaagcggctggaaattgagagga
acacacccgcgtaagagcacacccacaggcactgacagatttcggcaggccatcgactgg
tggaacaatgcagagtttggctggggtggtcggagaagagcccagctgcccggaagcccg
attgcaggggaaaaccaccttcccactccagcccccttctggccttcccatctacctcgc
tga

>gi568815595f:122154190_122385188|GENSCAN_predicted_peptide_8|241_aa
MEEVDAAMNARPHKEDGRVVEPKRAVSREDSQRLGAHLTLKKIFVGGIKEDTEEHHLRDY
FEDCGDGGYGGNKDGYNGFGSDSGYEGGSPSYSGGSRGYGSGGQDSGNQGSGYDGGGSHD
SYNNGVGVSDFGASCPAKKQSAKMIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGK
LEAVQYKTQVVAGTNYYIKVRAGDNKYMHLKVFKSLPGQNEDLVLTGYQVDKNKDDELTG
F

>gi568815595f:122154190_122385188|GENSCAN_predicted_CDS_8|726_bp
atggaggaggtagatgcagccatgaatgcaaggccacacaaggaggatggaagagttgtg
gaaccaaagagagctgtctcaagagaagattctcagagactaggtgcccacttaactctg
aaaaagatatttgttggtggcattaaagaagacactgaagaacatcacctaagagattat
tttgaagactgtggtgatggtggatatggtggcaataaggatggctataatggatttggt
agtgatagtggttatgaaggaggcagccctagttactctggaggaagcagaggctacgga
agtggtggacaggattctggaaaccagggcagtggctatgatgggggtggcagccatgac
agctataacaatggagtaggcgtaagtgactttggtgcatcctgtccagcaaagaagcaa
tcagccaaaatgatacctggaggcttatctgaggccaaacccgccactccagaaatccag
gagattgttgataaggttaaaccacagcttgaagaaaaaacaaatgagacttacggaaaa
ttggaagctgtgcagtataaaactcaagttgttgctggaacaaattactacattaaggta
cgagcaggtgataataaatatatgcacttgaaagtattcaaaagtcttcccggacaaaat
gaggacttggtacttactggataccaggttgacaaaaacaaggatgacgagctgacgggc
ttttag

>gi568815595f:122154190_122385188|GENSCAN_predicted_peptide_9|146_aa
MATCYSADQRRTSPGTVALELLKVMRTIDDRIVHELNTTVPTASFAGKIDASQTCKQLYE
SLMAAHASRDRVIKNCIAQTSAVVKNLREEREKNLDDLTLLKQLRKEQTKLKWMQSELNV
EEVVNDRSWKVFNERCRIHFKPPKNE

>gi568815595f:122154190_122385188|GENSCAN_predicted_CDS_9|441_bp
atggccacttgctactccgccgaccagcgcagaacttcgccggggacggtggcgctggaa
ttactcaaggtgatgaggacaattgatgacagaatagtacatgaattaaacactacggtt
ccaacagcttcctttgcagggaaaattgatgccagccaaacctgtaaacaactttatgag
tctttgatggcagctcatgccagtagagacagagtcataaaaaactgtatagcccagact
tcagcagtagtaaaaaacctccgagaagagagagaaaagaatttggacgatttaacgtta
ttaaaacaacttagaaaagagcagacaaagttgaaatggatgcagtcagaactgaatgtt
gaagaagtggtaaatgacaggagctggaaggtgtttaatgaacgctgccgaattcacttc
aagcctccaaagaatgaataa