GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:38:39

Sequence gi568815596f:203767943_203972809 : 204867 bp : 40.82% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    111    106    6                               1.05
 1.01 Sngl -   5369   4992  378  2  0   80   33   661 0.982  55.71
 1.00 Prom -   7719   7680   40                              -4.35

 2.08 PlyA -   9124   9119    6                               1.05
 2.07 Term -  17662  17514  149  2  2   54   32   187 0.007   6.78
 2.06 Intr -  20794  20684  111  2  0  113   95   -15 0.001   1.13
 2.05 Intr -  42542  42387  156  0  0  115   26    95 0.074   5.06
 2.04 Intr -  44780  44630  151  2  1   77   97     0 0.116  -1.39
 2.03 Intr -  45390  45275  116  1  2   46   68    96 0.421   2.65
 2.02 Intr -  51662  51476  187  2  1   71   35   107 0.292   2.04
 2.01 Init -  54581  54357  225  2  0   56   44   193 0.262  10.22
 2.00 Prom -  54637  54598   40                              -2.45

 3.05 PlyA -  54876  54871    6                               1.05
 3.04 Term -  62772  62379  394  2  1   16   42   205 0.404   2.22
 3.03 Intr -  65848  65763   86  1  2   58   98    73 0.416   3.00
 3.02 Intr -  66517  66487   31  0  1   63   89    48 0.469  -0.39
 3.01 Init -  72851  72712  140  2  2   79   16   156 0.851   7.16
 3.00 Prom -  73493  73454   40                              -7.55

 4.00 Prom +  73811  73850   40                              -2.25
 4.01 Init +  76349  76461  113  1  2   76   49    83 0.081   2.93
 4.02 Intr +  81124  81250  127  1  1   62   47   119 0.158   4.96
 4.03 Intr +  81488  81653  166  1  1   29   68   106 0.212   1.31
 4.04 Term +  84691  84764   74  2  2   64   47    77 0.115  -1.71
 4.05 PlyA +  85709  85714    6                               1.05

 5.05 PlyA -  85873  85868    6                               1.05
 5.04 Term -  86234  86058  177  2  0    0   41   168 0.570   0.00
 5.03 Intr -  86487  86310  178  2  1   37   86    93 0.713   3.00
 5.02 Intr -  89895  89757  139  1  1   10  108    65 0.469  -0.70
 5.01 Init -  90889  90826   64  1  1   49   38   129 0.606   5.36
 5.00 Prom -  96857  96818   40                              -4.55

 6.00 Prom +  99888  99927   40                              -5.35
 6.01 Init + 100001 100109  109  1  1   85  113     8 0.392   3.68
 6.02 Intr + 102644 102991  348  0  0   60   85   402 0.370  31.50
 6.03 Intr + 103436 103545  110  0  2  105  101     6 0.898   2.68
 6.04 Term + 104766 104870  105  2  0   89   54    79 0.916   2.03
 6.05 PlyA + 105151 105156    6                              -1.75

 7.02 PlyA - 105292 105287    6                               1.05
 7.01 Sngl - 107904 107605  300  0  0   61   48   291 0.739  17.94
 7.00 Prom - 108478 108439   40                              -7.15

 8.15 PlyA - 108740 108735    6                               1.05
 8.14 Term - 110645 110397  249  2  0   27   37   160 0.026  -0.48
 8.13 Intr - 117022 116951   72  1  0   69   53    92 0.103   2.48
 8.12 Intr - 121614 121549   66  0  0   83   42    76 0.061   0.68
 8.11 Intr - 124480 124230  251  2  2   85    0   162 0.111   3.33
 8.10 Intr - 138370 138331   40  1  1  105   48    75 0.042   2.08
 8.09 Intr - 143563 143360  204  1  0   59   53   114 0.589   3.47
 8.08 Intr - 147603 147392  212  1  2   21   79   213 0.444  11.41
 8.07 Intr - 149466 149319  148  0  1   78   35    68 0.744  -0.61
 8.06 Intr - 150565 150416  150  1  0   84  107    70 0.914   7.94
 8.05 Intr - 167851 167801   51  1  0   92   92    44 0.489   3.39
 8.04 Intr - 172671 172575   97  2  1   23   93    89 0.501   1.99
 8.03 Intr - 175342 175192  151  2  1   64   88    99 0.009   5.80
 8.02 Intr - 176541 176433  109  0  1   -2  105    92 0.012   0.84
 8.01 Init - 188786 188700   87  2  0   82   95    41 0.082   4.89
 8.00 Prom - 194137 194098   40                              -6.15

 9.04 PlyA - 194811 194806    6                               1.05
 9.03 Term - 197441 197244  198  2  0   31   43   191 0.680   5.32
 9.02 Intr - 199057 198735  323  2  2   78   19   161 0.425   2.85
 9.01 Init - 201622 201520  103  1  1   87   78   109 0.860  10.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:203767943_203972809|GENSCAN_predicted_peptide_1|125_aa
MNDEGSPIKVTLATLKMSVQPTASLGGFEITPPVVLQLKCGSGPVHISRQCLVAVEEDAE
SEDEEEEDVNLLSISGKRSASGGGSKVPQKKGKLAADEDDDDDDDDDDDENDNDFDDEEA
EEKHE

>gi568815596f:203767943_203972809|GENSCAN_predicted_CDS_1|378_bp
atgaatgatgaaggcagtccaattaaagtcacactggcaactttgaaaatgtctgtacag
ccaactgcttcccttgggggctttgaaatcacaccaccagtggtcttacagttgaagtgt
ggttcagggccagtgcatattagtagacagtgcttagtagctgtggaggaagatgcagag
tcagaagatgaagaggaggaggatgtgaacctcttaagcatatctggaaagcggtctgcc
tctggaggtggtagcaaggttccacagaaaaaaggaaaacttgctgctgatgaagatgat
gatgatgatgatgatgatgatgatgatgaaaatgataatgattttgatgatgaggaagct
gaagaaaagcacgagtaa

>gi568815596f:203767943_203972809|GENSCAN_predicted_peptide_2|364_aa
MGTGSRIHQSEAPTLESESDASDTKKQRLRPFLEVAAVAARLLFHGSSGCGAVPSLHLEQ
TFYCDSNRIQHLDRPLPTSTQGPATKIFWQNSPKTYLVNNDVFLRFPSPVFAQKVTPQAP
PHWYKRTTSRLDMIWRKGIYTKDLKAWAQTDTGTPTFLAAYPQEPKAGNNPNVYRQNLDL
VATAMSTAKNLFPRLPADRGGHMTISCPARCKLPVLEWGFWDSSLKGLIFQWALVDWISS
SPPTLCLWPFSSHQSHEQLSTHEHPRADQPWLMGIGYTALWSMCNMMFFKEINAFLFPIM
AGPFFRPILSLKINEVPSTSQGLRSAGGRHLDWQAAPPAAPVRDPLGEASWAPESGGEVE
NLYV

>gi568815596f:203767943_203972809|GENSCAN_predicted_CDS_2|1095_bp
atgggcacaggatccaggatccaccaatcagaagcacccactctggagtctgaatcagat
gctagtgacacaaagaaacagcgactcagaccctttctagaggtggcggcagtggcagca
agattgcttttccacggcagcagtggctgcggtgctgtccccagcctgcacctggagcag
acattctactgtgatagcaacagaatacagcatctggacaggccactgcccacgtctaca
cagggccccgcaaccaagatattctggcagaactctccgaaaacttatttagtcaataac
gatgtatttttaaggtttccaagcccagtttttgctcagaaagtaaccccacaggctcct
ccacactggtacaagaggaccacctcaagattggacatgatctggagaaagggtatatac
acaaaagacttgaaagcatgggctcaaacagatactggtacaccaacattcctggcagcg
tatccacaagagccaaaagctggaaataacccgaatgtctaccgacagaaccttgatttg
gtggcgacagcaatgagcacggctaaaaatctgtttcccaggctccctgcagataggggt
ggccacatgactataagctgtccagcgagatgtaagcttccagtgcttgagtggggtttc
tgggacagttcattaaaaggccttatctttcagtgggcactggtggactggatttccagc
agcccaccaactctttgtctgtggcctttctctagccaccagagtcatgagcagctctcc
acccatgagcaccccagagcagaccaaccatggctgatgggaattgggtacactgccctt
tggtcaatgtgcaacatgatgttcttcaaagagattaatgcttttctatttccaataatg
gcaggcccgtttttcagaccaatcctttcactgaaaataaatgaagtcccatcgaccagc
caagggctgaggagtgccggcggacgacacctggactggcaggcagctccacctgcagcc
ccggtgcgggatccactgggtgaagccagctgggctcctgaatctggtggggaagtggag
aacctttatgtctag

>gi568815596f:203767943_203972809|GENSCAN_predicted_peptide_3|216_aa
MELESCSSRSRNQPALAAIISPQNGRSSPLIDVFASYESPHLFSRGWLTSSPQQQQQLMW
FLSSAWTLADTGRYCSSETNGDKGGRIPDVSHNGIPTIEMLWDSEAWAWSGHVTSYNWEM
TIVLTGSFSPHDREWMSQHPPLLVLPSGPPGNEMSPPTPNPKPMRGAAFLALFIPNSALW
KQDCWLAKKPEITFPLLVEANAERHLERLLSSRFST

>gi568815596f:203767943_203972809|GENSCAN_predicted_CDS_3|651_bp
atggagctggaatcatgttctagcagaagcagaaatcagccagctctggctgccatcatc
tctccccagaatggccgcagcagccctctgattgatgtctttgcctcctatgagtcccct
cacctcttctccagaggctggctcacttcttcaccccagcagcagcagcagttgatgtgg
tttctgtcttctgcctggaccctagcagatacaggtcgctactgcagctctgaaacaaac
ggggataaaggtggcagaataccagatgtcagtcataatggaatccccaccatcgaaatg
ctctgggacagtgaagcgtgggcatggtcagggcatgtgacctcatacaactgggaaatg
actattgttctcaccgggtcattcagtccccatgatcgtgaatggatgagccagcaccct
cctctcctagtgttgccgagtgggcctccaggaaatgaaatgtctccaccaacaccaaac
cccaaaccaatgagaggagcagcatttctggccttattcatacccaactcagctctgtgg
aaacaagactgctggcttgccaagaagccagaaataacatttcctctactggttgaggca
aatgctgagagacaccttgagaggttactgagttcacgcttttctacctag

>gi568815596f:203767943_203972809|GENSCAN_predicted_peptide_4|159_aa
MREKEEGKDCMEKVDLHQVNEKQGSSGRRRKSKFQRASSMFLPPSVMVSLKELDCLNTPQ
NITLIYYIDNITMIGQVEQEMIWKAASFEYCSEQERAPQQVQAVVQHPVLFGSCNLADPI
VSKASVVEKMQCGVYELSGIDPNVRCHTKKNDVSEKHSE

>gi568815596f:203767943_203972809|GENSCAN_predicted_CDS_4|480_bp
atgagggaaaaggaagaggggaaagactgcatggaaaaagtagatcttcatcaggttaat
gaaaaacagggcagctcaggcagaaggagaaaatcaaagtttcagagagcctcgtctatg
tttctgccaccctctgtgatggtgagtctgaaggaactggactgcctgaacaccccacag
aacatcactctgatctattacattgacaacatcacgatgattggacaagttgagcaagag
atgatatggaaggctgccagctttgagtactgttcagagcaggaaagggcaccacagcag
gtccaggctgtggtgcagcaccctgtgctatttgggtcatgtaatctggcagatcctatt
gtgtcaaaggcatcagtggtagaaaagatgcagtgtggagtatatgagctctctgggatt
gatccaaatgtcagatgtcacaccaagaaaaatgatgtttctgagaagcattcagaataa

>gi568815596f:203767943_203972809|GENSCAN_predicted_peptide_5|185_aa
MTAWRYEISFSGNENALEQHSEMLTSRKHQKHVFPVLLKYKQVKKLPSNASPAFHPLDKI
DNCEHENKTAAEYQAPLGDQSRCDDKLLPGIIRITALEPKEKITHTGRHIEHKKETRQAA
GYVFIGKRKELVRARQPREPKQKLSPLRSKQKGPWKSWALPDYGGSPVAISKTRSHVRAQ
RCEMH

>gi568815596f:203767943_203972809|GENSCAN_predicted_CDS_5|558_bp
atgactgcttggcggtatgagatttccttttcgggtaatgaaaacgctctggagcagcat
agtgaaatgctgacaagtagaaaacaccagaaacatgtgtttcctgtgctcttaaaatat
aagcaggtcaagaagcttccatcaaatgcatctcctgcatttcatcctttggataaaata
gacaattgtgagcatgagaacaagactgcagccgagtatcaggcccccctgggggatcag
agcaggtgtgatgacaaacttttaccaggcataattcgaataaccgcactagaacctaaa
gaaaagataacgcatacaggcaggcatatagagcacaagaaggaaaccaggcaggcagct
ggatacgtcttcattgggaagcgaaaagaactggtcagagcaaggcagccaagagagcca
aagcagaaactcagtcctctcagatccaagcaaaagggaccgtggaaaagctgggcctta
cctgactatggaggcagtccagtggccatttccaagaccaggagccatgtgagagctcag
cgatgtgaaatgcactga

>gi568815596f:203767943_203972809|GENSCAN_predicted_peptide_6|223_aa
MACLGFQRHKAQLNLATRTWPCTLLFFLLFIPVFCKAMHVAQPAVVLASSRGIASFVCEY
ASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLR
AMDTGLYICKVELMYPPPYYLGIGNGTQIYVIDPEPCPDSDFLLWILAAVSSGLFFYSFL
LTAVSLSKMLKKRSPLTTGVYVKMPPTEPECEKQFQPYFIPIN

>gi568815596f:203767943_203972809|GENSCAN_predicted_CDS_6|672_bp
atggcttgccttggatttcagcggcacaaggctcagctgaacctggctaccaggacctgg
ccctgcactctcctgttttttcttctcttcatccctgtcttctgcaaagcaatgcacgtg
gcccagcctgctgtggtactggccagcagccgaggcatcgccagctttgtgtgtgagtat
gcatctccaggcaaagccactgaggtccgggtgacagtgcttcggcaggctgacagccag
gtgactgaagtctgtgcggcaacctacatgatggggaatgagttgaccttcctagatgat
tccatctgcacgggcacctccagtggaaatcaagtgaacctcactatccaaggactgagg
gccatggacacgggactctacatctgcaaggtggagctcatgtacccaccgccatactac
ctgggcataggcaacggaacccagatttatgtaattgatccagaaccgtgcccagattct
gacttcctcctctggatccttgcagcagttagttcggggttgtttttttatagctttctc
ctcacagctgtttctttgagcaaaatgctaaagaaaagaagccctcttacaacaggggtc
tatgtgaaaatgcccccaacagagccagaatgtgaaaagcaatttcagccttattttatt
cccatcaattga

>gi568815596f:203767943_203972809|GENSCAN_predicted_peptide_7|99_aa
MGSSRNASTMLKKRHEQRRVLGAMLEEELTLEPLATLSGSLVIHSLACDKWFQGGGLQRP
GSPCMVGQAPFGFMDYLGLELPQDPDPRNGDDDEGWNPM

>gi568815596f:203767943_203972809|GENSCAN_predicted_CDS_7|300_bp
atgggaagtagcaggaatgcgagtaccatgctgaagaagagacatgagcagaggcgtgtg
ctaggagccatgttggaggaggaactgactctggagcccctggccactctatccggctcc
cttgtcatccacagtcttgcctgtgacaagtggttccaaggaggagggttgcaacgccca
ggctccccctgcatggtaggccaagccccttttgggttcatggattatttgggcttggag
ctgccccaggaccctgatcccagaaatggagatgatgatgaaggttggaatcccatgtga

>gi568815596f:203767943_203972809|GENSCAN_predicted_peptide_8|628_aa
MQTTTKAAHPMGNQNFSWQQSCDSGLEKKSKRKDSRERETLLSQTHTLTGEAERLFVEKF
PTLSGAPTQMRRNQKTNSGNMTKQGSSTPPKNHTSSPAMDPNQEEILHLPEKEFRRSQQT
VEEYLQPLRRKAAIQDSYSQERYQSLIKMRKTEAQTGNEPGPSHILLEFWLETEGREESE
AGVFVPKATFLQNHSSFQGAFSHSYGDPCSSAWVLNKLDYPQYGLNPVPLKIPMLKLQVP
VPQNVTVFGDKGFKEIMKVKCDHMDPVPRNSSSEIQLDFKIEKLDSLHRLFAWLQTVEAT
VLPSERRVVQCRDEELAAETGLSGLNQASQSLELQISSGIRSHRSRNPIVNCTCEESRLC
APYENPVLDDLRQNSFFLKLSLLQPLTFVENLSSMKPVPGAKKFRLFQNVVSLEAHRHLI
IAHSTLGPFNPNQSFIRAAHLYAMQSSGGTTEDAQLCPDTPETLSVPYESDSPFLLIPLT
VSPCCHFDEHMRLYPLRLLRDTVRRSSPDTGPSILDFLVFRIQPAPAETPTSTRSKTKRE
NNHQSPQGEEKSYQWDACCTANMTRWKQEENDKQEEKGDDVLQESAAHEKSSVLSSKICD
HPLKYISYNSSQRKLLLFVQIDSITLCD

>gi568815596f:203767943_203972809|GENSCAN_predicted_CDS_8|1887_bp
atgcagactacaacaaaggctgcacatcctatgggtaaccagaacttcagctggcaacaa
agttgtgattctggattggaaaaaaagtcaaaaagaaaagactcacgggaaagggagacc
ctcctctcccaaacacacactctgaccggagaagctgagcgtctgtttgtggagaagttt
ccgactttatctggagcacctacccaaatgagaaggaaccagaaaaccaactctggtaat
atgacaaaacaaggctcttcaacacccccaaaaaatcacactagttcaccagcaatggat
ccaaaccaagaagaaattcttcatctacctgaaaaagaattcaggagaagccagcagaca
gtggaggaatatctgcaaccactaagaagaaaggctgccatccaggactcctattcccag
gaaagatatcagtcactcatcaagatgaggaaaactgaggcacagacaggtaacgaacct
ggcccaagtcatatactgctggagttctggctggagacggaagggcgggaggaaagtgag
gctggagtgtttgttcccaaggcgaccttcctgcaaaaccacagctcctttcagggagcc
ttctcgcacagctacggcgacccttgcagctctgcctgggttctgaacaaattagattac
ccacaatatgggctgaatcctgtccccctcaaaattcctatgttgaaattacaagtccca
gtacctcagaatgtgactgtatttggagataagggctttaaagagataatgaaggtaaaa
tgcgatcatatggacccagtgcccaggaattcttccagtgaaatccaacttgatttcaaa
atagaaaaactggattcccttcacagactctttgcttggctacaaactgttgaagcaacc
gtgcttccttcagagaggcgggttgtccagtgcagagatgaagagctggctgcagagaca
ggcctttcgggtttgaatcaggcttcgcagtctctcgagctgcagatcagcagcggcatt
agatcccataggagcaggaaccctattgtgaactgcacgtgcgaggaatctaggttgtgc
gctccttatgagaatccagtgcttgatgatctgaggcagaacagtttcttcctaaaacta
tccctcctccaaccccttacattcgtggaaaatttgtcttccatgaaaccggtccctggt
gccaaaaagtttcgccttttccagaatgtcgtatctttggaagcacacagacatttgatc
attgcccactctaccctggggccattcaatcccaaccagtcatttataagagctgcacac
ttgtatgccatgcaatcttcaggaggcaccactgaggacgcacagctatgtcctgacaca
ccagagaccctctcagtcccatatgagtcggattcacccttccttctaattcctttgacc
gtctccccttgctgccattttgatgagcacatgcgtttatatccattacggttgttgagg
gacacagtaagaaggtcctcaccagataccggtccttctatcttggacttcttagtcttc
cgaattcaacctgcaccagcagaaactcctacttctacaaggtctaagacgaaacgggaa
aacaaccaccaaagcccacaaggtgaagagaaaagctaccagtgggatgcatgctgcacg
gctaacatgacaaggtggaagcaggaagaaaatgacaagcaggaagaaaaaggtgatgat
gtccttcaggaaagtgctgctcatgagaagtcatctgtgttatcttctaaaatttgcgat
catcccctgaaatatatttcttacaattcctctcagaggaagctgcttctttttgtccaa
atagatagtattactttgtgtgattaa

>gi568815596f:203767943_203972809|GENSCAN_predicted_peptide_9|207_aa
MVLSCDECGLHEEKDITRQRTLVVRIQAKTPTEGETKETHFIRGPKTPAPVTDWEGSLPL
VFNHCRDTSLIIHPCFRGVRPRRDACLGPSCLAASPTFLGEGQVPQPLLCLYPFSAFLGG
KKPPTTSPSPLAASPTFLGEEQELATSARNLATRPRNACSPGFLLSRVPSVRDPTGNRTV
PLTLAATPRAPGTLAQGSLTPSQTFLA

>gi568815596f:203767943_203972809|GENSCAN_predicted_CDS_9|624_bp
atggtcctctcttgtgacgaatgtggacttcatgaagaaaaagacataacaaggcagaga
acattagttgtcagaattcaagctaagactcctacagaaggagagacaaaggagacacat
tttatccgtggacccaaaactccggcaccggtcacggactgggaaggcagccttcccttg
gtgtttaatcattgcagggacacctctctgattattcacccatgtttcagaggtgtcaga
ccacgcagggatgcctgccttggtccttcatgcttagcggcaagtcccacttttctgggg
gaggggcaagtaccccaaccccttctgtgtctctaccccttctccgcctttctggggggc
aagaaacccccgaccacttctccttcacccttagcggcaagtcccacttttctaggggag
gagcaagagcttgctacaagtgccagaaatctggccaccaggccaaggaatgcctgcagc
ccaggattcctcctaagccgcgtcccatctgtgcgggaccccactggaaatcggactgtc
ccactcaccttggcagccactcccagagcccctggaactctggcccaaggctctctgact
ccttcccagaccttcttggcttag