GENSCAN 1.0	Date run:  6-Nov-116	Time: 18:12:57

Sequence gi568815596f:171825536_172083349 : 257814 bp : 40.49% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.10 Intr -   1347   1263   85  2  1   51   80    60 0.005   0.40
 1.09 Intr -   8521   8428   94  2  1  100  110    69 0.841   8.40
 1.08 Intr -   9330   9192  139  0  1   95   90    84 0.993   8.42
 1.07 Intr -  11732  11586  147  2  0   95   89   102 0.996  10.51
 1.06 Intr -  18973  18834  140  2  2   96   99    96 0.999  10.76
 1.05 Intr -  30414  30299  116  2  2   93   87    83 0.925   7.87
 1.04 Intr -  43288  43146  143  1  2   55  106   184 0.963  15.13
 1.03 Intr -  62120  61989  132  2  0   53   10   146 0.029   3.22
 1.02 Intr -  67723  67670   54  1  0  130   99    14 0.083   4.96
 1.01 Init -  68679  68668   12  0  0   91   57    31 0.804  -0.05
 1.00 Prom -  76899  76860   40                              -4.85

 2.00 Prom +  79675  79714   40                              -3.95
 2.01 Sngl +  96882  97244  363  2  0   38   34   316 0.846  17.33
 2.02 PlyA + 100404 100409    6                               1.05

 3.02 PlyA - 100528 100523    6                               1.05
 3.01 Sngl - 115345 114890  456  1  0   57   44   232 0.539  11.63
 3.00 Prom - 117095 117056   40                              -7.35

 4.00 Prom + 118197 118236   40                              -6.15
 4.01 Init + 120322 120370   49  0  1   86   89    28 0.688   1.86
 4.02 Intr + 121173 121248   76  1  1   53   80    41 0.665  -2.55
 4.03 Intr + 127346 127466  121  2  1   90   94    85 0.833   8.88
 4.04 Intr + 139803 139982  180  2  0   99   98    53 0.988   6.54
 4.05 Intr + 140252 140373  122  1  2  122   84    88 0.999  10.17
 4.06 Intr + 140874 140978  105  0  0  100   86    64 0.964   5.81
 4.07 Intr + 141308 141414  107  2  2   41   91    75 0.880   2.04
 4.08 Intr + 150622 150773  152  2  2   51   63   111 0.949   3.86
 4.09 Intr + 153712 153828  117  0  0   86   97   139 0.999  14.34
 4.10 Term + 157650 157817  168  2  0   54   43   192 0.995   8.20
 4.11 PlyA + 158070 158075    6                               1.05

 5.00 Prom + 173658 173697   40                              -7.65
 5.01 Init + 174435 174497   63  2  0  125   58    71 0.150   9.01
 5.02 Intr + 198861 199049  189  2  0   47   91   102 0.208   5.26
 5.03 Intr + 230750 230800   51  1  0   90   57    56 0.071   0.89
 5.04 Intr + 231930 232003   74  2  2   74   67    56 0.129  -0.61
 5.05 Intr + 236936 237098  163  2  1   45   93    83 0.252   3.56
 5.06 Intr + 240069 240217  149  2  2   63   66   174 0.563  10.81
 5.07 Intr + 240729 240771   43  0  1   69   79    42 0.903  -1.28
 5.08 Intr + 245372 245535  164  1  2   62  115    90 0.962   6.95
 5.09 Intr + 249936 250083  148  0  1   97   99    99 0.981  11.22
 5.10 Intr + 253060 253166  107  0  2   64   94    47 0.296   0.99
 5.11 Intr + 255769 256040  272  1  2   44   39   207 0.131   7.66
 5.12 Intr + 256133 256280  148  0  1   36   41   154 0.086   3.87
 5.13 Intr + 256298 256482  185  2  2   18   75    99 0.128   0.11
 5.14 Term + 257040 257203  164  1  2  110   55    89 0.125   4.92
 5.15 PlyA + 257442 257447    6                              -1.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:171825536_172083349|GENSCAN_predicted_peptide_1|354_aa
MAVKVQTTKRGDPHELRNIFLQLHQQCTVAKGDNRSSEEEGEVGQQEHKSDKFLNEELIL
SVPCGKYASTEVDGERYMTPEDFVQRYLGLYNDPNSNPKIVQLLAGVADQTKDGLISYQE
FLAFESVLCAPDSMFIVAFQLFDKSGNGEVTFENVKEIFGQTIIHHHIPFNWDCEFIRLH
FGHNRKKHLNYTEFTQFLQELQLEHARQAFALKDKSKSGMISGLDFSDIMVTIRSHMLTP
FVEENLVSAAGGSISHQVSFSYFNAFNSLLNNMELVRKIYSTLAGTRKDVEVTKEEFAQS
AIRYGQVTPLEIDILYQLADLYNASGRLTLADIERIAPLAEGALPYNLAELQRQ

>gi568815596f:171825536_172083349|GENSCAN_predicted_CDS_1|1062_bp
atggcggtcaaggtgcagacaactaagcgaggggatcctcatgagttaagaaacatattt
ctacagctacatcagcagtgtacagtagcaaaaggagacaatagaagcagtgaagaagaa
ggtgaggtgggacagcaggaacataagtctgacaaatttctaaatgaagagttaattttg
tctgtcccttgtggcaaatatgccagtactgaggttgatggagagcgttatatgacccca
gaagactttgttcagcgctatcttggactgtataatgatccaaatagtaacccaaagatc
gtgcagctcttggcaggagtagctgatcaaaccaaggatgggttgatctcctatcaagag
tttttggcatttgaatctgttttatgtgctccagattccatgttcatagtggctttccag
ttgtttgacaagagtggaaatggagaggtgacatttgaaaatgtcaaagaaatttttgga
cagactattattcatcatcatatcccttttaactgggattgtgaatttatccgactgcat
tttgggcataaccggaagaagcatcttaactacacagaattcacgcagtttctccaggag
ctgcaattggaacatgcaagacaagcctttgcactcaaagacaaaagcaaaagtggcatg
atttctggtctggatttcagtgacatcatggttaccattagatctcacatgcttactcct
tttgtggaggagaacttagtttcagcagctggaggaagtatctcacaccaggttagcttc
tcctacttcaatgcatttaactcgttactgaataacatggagcttgttcgtaagatatat
agcactctagctggcacaaggaaagatgttgaagtcacaaaggaggaatttgcccagagt
gccatacgctatggacaagtcacaccactagaaattgatattctatatcagcttgcagac
ttatataatgcttcagggcgcttgactttggcagatattgagagaatagccccattggct
gagggggccttaccttacaacctggcagaacttcagagacag

>gi568815596f:171825536_172083349|GENSCAN_predicted_peptide_2|120_aa
MSDCAVTSGPGARGLIRPSSAAGDRSSEMAGKLPGKVYQGEEAARSGIERRDGGDNARLE
LSGCSLGSRRPAWDRKRGTLSPAAPCWRRSAPPPPTAWGSAPSASNPAPTEGRRRQGKAS

>gi568815596f:171825536_172083349|GENSCAN_predicted_CDS_2|363_bp
atgtcagactgtgcggtcacttccggcccgggagcgcgcgggttgattcgtccttcctca
gccgcgggtgatcgtagctcggaaatggcgggtaagttaccgggaaaagtttaccaaggg
gaggaggcggccagatcggggatagaacgccgagacggtggtgacaatgcccgcctagaa
ctttcgggctgtagcctgggttccagaaggcctgcttgggaccggaagcgcggaactctc
agcccagcagctccttgttggcggcggtccgcgcccccgcccccaactgcttggggttct
gcgccttctgccagcaatccggcccctaccgagggccgaagacgccagggaaaagcgtca
tga

>gi568815596f:171825536_172083349|GENSCAN_predicted_peptide_3|151_aa
MRQQKTLRLPTKRKLHLKYQESYLNYGFTATGDSHSPSPLCIVHGDQLSNKATKPSKLLS
YIETKHPALKDKPLEFSKEKNMNMKNRSNLLKATTSSNASALRAPFLMANQIAKTKKPFT
TGEELILPAAKDICRELLGEARIQKVARVPP

>gi568815596f:171825536_172083349|GENSCAN_predicted_CDS_3|456_bp
atgagacagcagaagactctaagactgccaacaaaaagaaagctgcatttaaaataccaa
gagtcctacttaaattatgggttcactgcaacaggtgattcacattctccaagccctctg
tgtatagtacatggtgaccagctatccaacaaagccacaaaaccttcaaaactgcttagt
tacatcgagaccaagcaccctgcattaaaagacaagcctttggagttttcaaaagaaaaa
aacatgaacatgaagaacagaagcaatttattgaaggccaccacttcatcaaatgcgtct
gcactgagagctccattcttaatggctaaccaaattgctaaaactaagaagccctttact
actggtgaagagttaatcctgcctgctgctaaggacatttgtcgtgaacttttaggagag
gctcgaattcaaaaggtggcgcgtgttcctccttag

>gi568815596f:171825536_172083349|GENSCAN_predicted_peptide_4|398_aa
MGFHHVGQAGLELLTSVRFPEDLENDIRTFFPEYTHQLFGDDETAFGYKGLKILLYYIAG
SLSTMFRVEYASKVDENFDCVEADDVEGKIRQIIPPGFCTNTNDFLSLLEKEVDFKPFGT
LLHTYSVLSPTGGENFTFQIYKADMTCRGFREYHERLQTFLMWFIETASFIDVDDERWHY
FLVFEKYNKDGATLFATVGYMTVYNYYVYPDKTRPRVSQMLILTPFQGQGHGAQLLETVH
RYYTEFPTVLDITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQGFNEDMVIEAQQKF
KINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKKQRDLAKMRKCLRPEE
LTNQMNQIEISMQHEQLEESFQELVEDYRRVIERLAQE

>gi568815596f:171825536_172083349|GENSCAN_predicted_CDS_4|1197_bp
atggggtttcaccatgttggccaggctggtcttgaactcctgacctcagttcgttttcct
gaagatcttgaaaatgacattagaactttctttcctgagtatacccatcaactctttggg
gatgatgaaactgcttttggttacaagggtctaaagatcctgttatactatattgctggt
agcctgtcaacaatgttccgtgttgaatatgcatctaaagttgatgagaactttgactgt
gtagaggcagatgatgttgagggcaaaattagacaaatcattccacctggattttgcaca
aacacgaatgatttcctttctttactggaaaaggaagttgatttcaagccattcggaacc
ttacttcatacctactcagttctcagtccaacaggaggagaaaactttacctttcagata
tataaggctgacatgacatgtagaggctttcgagaatatcatgaaaggcttcagaccttt
ttgatgtggtttattgaaactgctagctttattgacgtggatgatgaaagatggcactac
tttctagtatttgagaagtataataaggatggagctacgctctttgcgaccgtaggctac
atgacagtctataattactatgtgtacccagacaaaacccggccacgtgtaagtcagatg
ctgattttgactccatttcaaggtcaaggccatggtgctcaacttcttgaaacagttcat
agatactacactgaatttcctacagttcttgatattacagcggaagatccatccaaaagc
tatgtgaaattacgagactttgtgcttgtgaagctttgtcaagatttgccctgtttttcc
cgggaaaaattaatgcaaggattcaatgaagatatggtgatagaggcacaacagaagttc
aaaataaataagcaacacgctagaagggtttatgaaattcttcgactactggtaactgac
atgagtgatgccgaacaatacagaagctacagactggatattaaaagaagactaattagc
ccatataagaaaaagcagagagatcttgctaagatgagaaaatgtctcagaccagaagaa
ctgacaaaccagatgaaccaaatagaaataagcatgcaacatgaacagctggaagagagt
tttcaggaactagtggaagattaccggcgtgttattgaacgacttgctcaagagtaa

>gi568815596f:171825536_172083349|GENSCAN_predicted_peptide_5|639_aa
MAAPSGVHLLVRRGKRVEESPLPAERPLPSMEAQGVFTNKNNSEKPKPQSPTNDLSRQIK
IGLQNPNHEKRHDFLHVIFTNGKQGNVFEVLSTELGTSKLLTVQLIVLAATSPKRVFGQR
RQLGLRRKEKEISGEVNCIALAISVNFSMTAQQPFCLQVITLPDHRAEWRQEHRLFGGDL
VDMTTEEIDALVHREIISHNAYPSPLGYGGFPKSVCTSVNNVLCHGIPDSRPLQDGDIIN
IDVTVYYNGYHGDTSETFLVGNVDECGKKLVEVARRCRDEAIAACRAGAPFSVIGNTISM
PVKSCRHTPTPHATVRVTSTFFQIRGVKFATTGHLDCLCEFGLKPYNQKDYSFGPMPSRI
AGHPAGPNPLWTKEPPPRQLKRFRLALLASGPALARCRSRKRQLFWKPRGSQREEIRAHL
RARAYLAGTEACELSSSSAGSSIPLQEQESKGPRSVCQGPFLPGAPSFPLRLLSGTSPTR
VFKQLMVVLTLVSTEAGFAKLTSLKDNLGFRKRQGNGTCSCQDRTKSQLIFVTFIIRETE
DQVARKRDEFQLLPNTGFSRRPPTPPARLLCVQGCRFLDRGVSDSTELAENLTQSHWDSS
QEWLRLTPPGPPGPEVTPVGSMRNPGPSGQMGEFCFLSE

>gi568815596f:171825536_172083349|GENSCAN_predicted_CDS_5|1920_bp
atggcggcgcccagtggcgtccacctgctcgtccgcagaggtaagcgcgtggaggagagc
cccttacctgctgaaagaccattaccaagcatggaggcccagggggtctttacaaacaag
aataattctgagaaacccaaaccacaaagcccaaccaatgacctctccaggcagataaaa
attggcctccagaaccctaaccatgaaaaaagacatgacttcctacatgtaatcttcacc
aatggcaagcagggtaatgtctttgaagtactcagcaccgagcttggcaccagtaagctc
ttgactgtccaactaatagttctggcagccacctccccaaagcgtgtgtttggtcagcga
aggcagcttggcttaagaagaaaagaaaaagaaatctctggtgaggtgaattgtattgct
ttagccatttcagtcaatttcagcatgacagcccaacagcccttctgcctgcaagttata
accttgccagatcacagagcagagtggagacaagaacacaggctctttgggggagacctg
gttgacatgacaactgaagagatagatgctcttgttcatcgggaaatcatcagtcataat
gcctatccctcacctctaggctatggaggttttccaaaatctgtttgtacctctgtaaac
aacgtgctctgtcatggtattcctgacagtcgacctcttcaggatggagatattatcaac
attgatgtcacagtctattacaatggctaccatggagacacctctgaaacatttttggtg
ggcaatgtggacgaatgtggtaaaaagttagtggaggttgccaggaggtgtagagatgaa
gcaattgcagcttgcagagcaggggctcccttctctgtaattggaaacacaatcagcatg
ccagtcaagagctgcagacatactccaactccccatgccacagttagggttaccagtact
ttctttcaaattagaggagtgaaatttgctactactggtcacttggattgtctctgtgaa
tttggacttaaaccctacaatcagaaggactactctttcggacccatgccctcgaggatc
gctggacacccagcaggtccaaaccctctttggaccaaagagcccccacctaggcagctc
aagaggttcagactggcccttctcgcatcgggacccgcgcttgcacgctgcaggagccgc
aaacgtcagctgttctggaaaccgagagggtcccagagagaggagatacgggcgcatttg
agagcaagggcctacttggccgggactgaagcttgcgagttgagctccagttcggccggc
agttccatcccgcttcaggaacaggaatccaagggcccacgctctgtctgccaagggcca
ttcctgcccggagcaccctcctttcccttgcgcttgctctccggaacaagtccaacgagg
gtgttcaagcagttaatggttgtgctaactcttgtttctactgaagcgggttttgcaaag
ctgacatcccttaaagataacttgggctttcggaagcggcaaggaaatggcacctgtagt
tgccaggacaggactaagagccagctcatctttgtaacattcataatacgggaaactgag
gaccaggtggctcggaaaagagatgagttccagcttttacctaacacagggttctctcgt
cgtcccccaacccctccagctcggcttctttgtgtccagggttgtagatttttggataga
ggtgtttctgattctactgaactggccgaaaacctcacccagagccactgggattccagc
caagagtggctgcggctaacaccaccaggacctcctggtcctgaggtgactccagtaggc
tccatgaggaatcccggaccctcaggacaaatgggagagttttgttttctctcagagtga