Result of FASTA (omim) for pF1KB5834
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5834, 481 aa
  1>>>pF1KB5834 481 - 481 aa - 481 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.9378+/-0.000313; mu= 6.8578+/- 0.020
 mean_var=168.4242+/-34.841, 0's: 0 Z-trim(121.5): 50  B-trim: 297 in 1/56
 Lambda= 0.098826
 statistics sampled from 38256 (38308) to 38256 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.449), width:  16
 Scan time: 11.650

The best scores are:                                      opt bits E(85289)
NP_001372 (OMIM: 602919) docking protein 1 isoform ( 481) 3323 485.6 1.3e-136
NP_001305796 (OMIM: 602919) docking protein 1 isof ( 470) 3181 465.4 1.6e-130
NP_001305795 (OMIM: 602919) docking protein 1 isof ( 342) 2367 349.2 1.1e-95
NP_001184189 (OMIM: 602919) docking protein 1 isof ( 342) 2367 349.2 1.1e-95
NP_001305798 (OMIM: 602919) docking protein 1 isof ( 267) 1867 277.8 2.5e-74
XP_016859017 (OMIM: 602919) PREDICTED: docking pro ( 267) 1867 277.8 2.5e-74
NP_001305797 (OMIM: 602919) docking protein 1 isof ( 177) 1048 160.9 2.6e-39
XP_011532958 (OMIM: 611435) PREDICTED: docking pro ( 440)  675 108.1 5.4e-23
NP_001295165 (OMIM: 611435) docking protein 3 isof ( 440)  675 108.1 5.4e-23
NP_001295164 (OMIM: 611435) docking protein 3 isof ( 440)  675 108.1 5.4e-23
XP_011532957 (OMIM: 611435) PREDICTED: docking pro ( 440)  675 108.1 5.4e-23
XP_011532956 (OMIM: 611435) PREDICTED: docking pro ( 440)  675 108.1 5.4e-23
XP_005266042 (OMIM: 611435) PREDICTED: docking pro ( 440)  675 108.1 5.4e-23
NP_079148 (OMIM: 611435) docking protein 3 isoform ( 496)  675 108.1 5.9e-23
NP_003965 (OMIM: 604997) docking protein 2 isoform ( 412)  590 95.9 2.3e-19
NP_001138347 (OMIM: 611435) docking protein 3 isof ( 330)  504 83.6 9.4e-16
XP_005266044 (OMIM: 611435) PREDICTED: docking pro ( 330)  504 83.6 9.4e-16
XP_011532959 (OMIM: 611435) PREDICTED: docking pro ( 338)  375 65.2 3.3e-10
XP_016865372 (OMIM: 611435) PREDICTED: docking pro ( 395)  375 65.2 3.7e-10
XP_005273737 (OMIM: 604997) PREDICTED: docking pro ( 318)  362 63.3 1.1e-09
NP_958728 (OMIM: 604997) docking protein 2 isoform ( 258)  335 59.4 1.4e-08
NP_001304729 (OMIM: 604997) docking protein 2 isof ( 258)  335 59.4 1.4e-08
XP_011527206 (OMIM: 608334) PREDICTED: docking pro ( 198)  226 43.8 0.00054
NP_808874 (OMIM: 608334) docking protein 5 isoform ( 198)  226 43.8 0.00054
NP_060901 (OMIM: 608334) docking protein 5 isoform ( 306)  226 43.9 0.00075
NP_060580 (OMIM: 608333) docking protein 4 isoform ( 326)  222 43.4  0.0012
XP_005256100 (OMIM: 608333) PREDICTED: docking pro ( 326)  222 43.4  0.0012
NP_001317485 (OMIM: 608333) docking protein 4 isof ( 365)  222 43.4  0.0013
XP_016865682 (OMIM: 607744) PREDICTED: fibroblast  ( 455)  218 42.9  0.0023
XP_011512556 (OMIM: 607744) PREDICTED: fibroblast  ( 492)  218 42.9  0.0024
NP_006644 (OMIM: 607744) fibroblast growth factor  ( 492)  218 42.9  0.0024
XP_011512557 (OMIM: 607744) PREDICTED: fibroblast  ( 492)  218 42.9  0.0024
XP_016881099 (OMIM: 611402) PREDICTED: docking pro ( 223)  208 41.3  0.0035
XP_016881100 (OMIM: 611402) PREDICTED: docking pro ( 223)  208 41.3  0.0035
XP_011524177 (OMIM: 611402) PREDICTED: docking pro ( 289)  208 41.3  0.0043
NP_689934 (OMIM: 611402) docking protein 6 [Homo s ( 331)  208 41.4  0.0047
NP_001138348 (OMIM: 611435) docking protein 3 isof ( 228)  202 40.4  0.0064
XP_016865373 (OMIM: 611435) PREDICTED: docking pro ( 285)  202 40.5  0.0076


>>NP_001372 (OMIM: 602919) docking protein 1 isoform a [  (481 aa)
 initn: 3323 init1: 3323 opt: 3323  Z-score: 2573.7  bits: 485.6 E(85289): 1.3e-136
Smith-Waterman score: 3323; 100.0% identity (100.0% similar) in 481 aa overlap (1-481:1-481)

               10        20        30        40        50        60
pF1KB5 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLHGSYVLRVEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLHGSYVLRVEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 ERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGND
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 IFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 IYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 LAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGS
              430       440       450       460       470       480

        
pF1KB5 T
       :
NP_001 T
        

>>NP_001305796 (OMIM: 602919) docking protein 1 isoform   (470 aa)
 initn: 3181 init1: 3181 opt: 3181  Z-score: 2464.4  bits: 465.4 E(85289): 1.6e-130
Smith-Waterman score: 3181; 100.0% identity (100.0% similar) in 460 aa overlap (22-481:11-470)

               10        20        30        40        50        60
pF1KB5 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
                            :::::::::::::::::::::::::::::::::::::::
NP_001            MPNLIRASSGWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
                          10        20        30        40         

               70        80        90       100       110       120
pF1KB5 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
      50        60        70        80        90       100         

              130       140       150       160       170       180
pF1KB5 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLHGSYVLRVEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLHGSYVLRVEA
     110       120       130       140       150       160         

              190       200       210       220       230       240
pF1KB5 ERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGND
     170       180       190       200       210       220         

              250       260       270       280       290       300
pF1KB5 IFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPL
     230       240       250       260       270       280         

              310       320       330       340       350       360
pF1KB5 DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDP
     290       300       310       320       330       340         

              370       380       390       400       410       420
pF1KB5 IYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPL
     350       360       370       380       390       400         

              430       440       450       460       470       480
pF1KB5 LAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGS
     410       420       430       440       450       460         

        
pF1KB5 T
       :
NP_001 T
     470

>>NP_001305795 (OMIM: 602919) docking protein 1 isoform   (342 aa)
 initn: 2367 init1: 2367 opt: 2367  Z-score: 1839.1  bits: 349.2 E(85289): 1.1e-95
Smith-Waterman score: 2367; 100.0% identity (100.0% similar) in 342 aa overlap (140-481:1-342)

     110       120       130       140       150       160         
pF1KB5 WVQTLCRNAFPKGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCG
                                     ::::::::::::::::::::::::::::::
NP_001                               MLENSLYSPTWEGSQFWVTVQRTEAAERCG
                                             10        20        30

     170       180       190       200       210       220         
pF1KB5 LHGSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHGSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPG
               40        50        60        70        80        90

     230       240       250       260       270       280         
pF1KB5 TFTFQTAQGNDIFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFTFQTAQGNDIFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELL
              100       110       120       130       140       150

     290       300       310       320       330       340         
pF1KB5 DSPPALYAEPLDSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPPALYAEPLDSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLL
              160       170       180       190       200       210

     350       360       370       380       390       400         
pF1KB5 KAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDY
              220       230       240       250       260       270

     410       420       430       440       450       460         
pF1KB5 AVPPPRSTKPLLAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVPPPRSTKPLLAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVG
              280       290       300       310       320       330

     470       480 
pF1KB5 TDKTGVKSEGST
       ::::::::::::
NP_001 TDKTGVKSEGST
              340  

>>NP_001184189 (OMIM: 602919) docking protein 1 isoform   (342 aa)
 initn: 2367 init1: 2367 opt: 2367  Z-score: 1839.1  bits: 349.2 E(85289): 1.1e-95
Smith-Waterman score: 2367; 100.0% identity (100.0% similar) in 342 aa overlap (140-481:1-342)

     110       120       130       140       150       160         
pF1KB5 WVQTLCRNAFPKGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCG
                                     ::::::::::::::::::::::::::::::
NP_001                               MLENSLYSPTWEGSQFWVTVQRTEAAERCG
                                             10        20        30

     170       180       190       200       210       220         
pF1KB5 LHGSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHGSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPG
               40        50        60        70        80        90

     230       240       250       260       270       280         
pF1KB5 TFTFQTAQGNDIFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFTFQTAQGNDIFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELL
              100       110       120       130       140       150

     290       300       310       320       330       340         
pF1KB5 DSPPALYAEPLDSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPPALYAEPLDSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLL
              160       170       180       190       200       210

     350       360       370       380       390       400         
pF1KB5 KAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDY
              220       230       240       250       260       270

     410       420       430       440       450       460         
pF1KB5 AVPPPRSTKPLLAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVPPPRSTKPLLAPKPQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVG
              280       290       300       310       320       330

     470       480 
pF1KB5 TDKTGVKSEGST
       ::::::::::::
NP_001 TDKTGVKSEGST
              340  

>>NP_001305798 (OMIM: 602919) docking protein 1 isoform   (267 aa)
 initn: 1867 init1: 1867 opt: 1867  Z-score: 1455.4  bits: 277.8 E(85289): 2.5e-74
Smith-Waterman score: 1867; 100.0% identity (100.0% similar) in 267 aa overlap (215-481:1-267)

          190       200       210       220       230       240    
pF1KB5 LLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGNDIFQA
                                     ::::::::::::::::::::::::::::::
NP_001                               MFSFEAGRRCPSGPGTFTFQTAQGNDIFQA
                                             10        20        30

          250       260       270       280       290       300    
pF1KB5 VETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPLDSLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPLDSLR
               40        50        60        70        80        90

          310       320       330       340       350       360    
pF1KB5 IAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDPIYDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDPIYDE
              100       110       120       130       140       150

          370       380       390       400       410       420    
pF1KB5 PEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPLLAPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPLLAPK
              160       170       180       190       200       210

          430       440       450       460       470       480 
pF1KB5 PQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGST
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGST
              220       230       240       250       260       

>>XP_016859017 (OMIM: 602919) PREDICTED: docking protein  (267 aa)
 initn: 1867 init1: 1867 opt: 1867  Z-score: 1455.4  bits: 277.8 E(85289): 2.5e-74
Smith-Waterman score: 1867; 100.0% identity (100.0% similar) in 267 aa overlap (215-481:1-267)

          190       200       210       220       230       240    
pF1KB5 LLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGNDIFQA
                                     ::::::::::::::::::::::::::::::
XP_016                               MFSFEAGRRCPSGPGTFTFQTAQGNDIFQA
                                             10        20        30

          250       260       270       280       290       300    
pF1KB5 VETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPLDSLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VETAIHRQKAQGKAGQGHDVLRADSHEGEVAEGKLPSPPGPQELLDSPPALYAEPLDSLR
               40        50        60        70        80        90

          310       320       330       340       350       360    
pF1KB5 IAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDPIYDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQLLKAKLTDPKEDPIYDE
              100       110       120       130       140       150

          370       380       390       400       410       420    
pF1KB5 PEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPLLAPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPATDDYAVPPPRSTKPLLAPK
              160       170       180       190       200       210

          430       440       450       460       470       480 
pF1KB5 PQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGST
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQGPAFPEPGTATGSGIKSHNSALYSQVQKSGASGSWDCGLSRVGTDKTGVKSEGST
              220       230       240       250       260       

>>NP_001305797 (OMIM: 602919) docking protein 1 isoform   (177 aa)
 initn: 1048 init1: 1048 opt: 1048  Z-score: 826.8  bits: 160.9 E(85289): 2.6e-39
Smith-Waterman score: 1048; 100.0% identity (100.0% similar) in 152 aa overlap (1-152:1-152)

               10        20        30        40        50        60
pF1KB5 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHKGSSSGGGRGSSRRL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQTLCRNAFP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLHGSYVLRVEA
       ::::::::::::::::::::::::::::::::                            
NP_001 KGSWTLAPTDNPPKLSALEMLENSLYSPTWEGHVLFRGRPPLPLRPWNLHLPDGTGK   
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KB5 ERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTFTFQTAQGND

>>XP_011532958 (OMIM: 611435) PREDICTED: docking protein  (440 aa)
 initn: 574 init1: 214 opt: 675  Z-score: 533.8  bits: 108.1 E(85289): 5.4e-23
Smith-Waterman score: 675; 37.8% identity (59.3% similar) in 386 aa overlap (1-375:4-379)

                  10        20        30        40          50     
pF1KB5    MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHK--GSSSGGGR-
          ..  . .: :. :  .:: : :::.::.:: ..: :::::: .. .  : ...: : 
XP_011 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB5 -GSSRRLDCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQT
        : .:: . .:::::.:::: :.  :. :.  . :: : :..:::::::.     ::.  
XP_011 AGPGRRGERRVIRLADCVSVLPADGESCPRD-TGAFLLTTTERSHLLAAQ--HRQAWMGP
               70        80        90        100         110       

           120        130        140       150       160       170 
pF1KB5 LCRNAFP-KGSWTLAPTD-NPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLH
       .:. :::  :  . . :: . :: . . : :::.::   : ..: :.::::::: :: :.
XP_011 ICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLK
       120       130       140       150       160       170       

             180       190       200       210       220       230 
pF1KB5 GSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTF
       :  .: .  . . :     ...  . : :::: .::..: :: .::::::::: :: : :
XP_011 GPALLVLGPDAIQL----REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLF
       180       190           200       210       220       230   

             240       250          260       270        280       
pF1KB5 TFQTAQGNDIFQAVETAIHRQKAQGKA---GQGHDVLRADSHEGEVAEGKL-PSPPGPQE
       .:.:  . :. .::  :: ::. .       :   . :: :  .  . :.:   ::::. 
XP_011 AFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEP
           240       250       260       270       280       290   

       290       300        310       320       330       340      
pF1KB5 LLDSPPALYAEPL-DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQ
         .    : :::  .:: .   :  ..: :    :.  .:. :   .. :: .:     .
XP_011 PTSRKMHL-AEPGPQSLPLLLGPEPNDLASGLYASVCKRAS-GPPGNEHLYENLCVLEAS
           300        310       320       330        340       350 

        350       360       370       380       390       400      
pF1KB5 QLLKAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPAT
         :..   .:.: :    :   .:.  .:                               
XP_011 PTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLSWPGPANDSTLEAQYRRLLELDQVEGTG
             360       370        380       390       400       410

>>NP_001295165 (OMIM: 611435) docking protein 3 isoform   (440 aa)
 initn: 574 init1: 214 opt: 675  Z-score: 533.8  bits: 108.1 E(85289): 5.4e-23
Smith-Waterman score: 675; 37.8% identity (59.3% similar) in 386 aa overlap (1-375:4-379)

                  10        20        30        40          50     
pF1KB5    MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHK--GSSSGGGR-
          ..  . .: :. :  .:: : :::.::.:: ..: :::::: .. .  : ...: : 
NP_001 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB5 -GSSRRLDCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQT
        : .:: . .:::::.:::: :.  :. :.  . :: : :..:::::::.     ::.  
NP_001 AGPGRRGERRVIRLADCVSVLPADGESCPRD-TGAFLLTTTERSHLLAAQ--HRQAWMGP
               70        80        90        100         110       

           120        130        140       150       160       170 
pF1KB5 LCRNAFP-KGSWTLAPTD-NPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLH
       .:. :::  :  . . :: . :: . . : :::.::   : ..: :.::::::: :: :.
NP_001 ICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLK
       120       130       140       150       160       170       

             180       190       200       210       220       230 
pF1KB5 GSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTF
       :  .: .  . . :     ...  . : :::: .::..: :: .::::::::: :: : :
NP_001 GPALLVLGPDAIQL----REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLF
       180       190           200       210       220       230   

             240       250          260       270        280       
pF1KB5 TFQTAQGNDIFQAVETAIHRQKAQGKA---GQGHDVLRADSHEGEVAEGKL-PSPPGPQE
       .:.:  . :. .::  :: ::. .       :   . :: :  .  . :.:   ::::. 
NP_001 AFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEP
           240       250       260       270       280       290   

       290       300        310       320       330       340      
pF1KB5 LLDSPPALYAEPL-DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQ
         .    : :::  .:: .   :  ..: :    :.  .:. :   .. :: .:     .
NP_001 PTSRKMHL-AEPGPQSLPLLLGPEPNDLASGLYASVCKRAS-GPPGNEHLYENLCVLEAS
           300        310       320       330        340       350 

        350       360       370       380       390       400      
pF1KB5 QLLKAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPAT
         :..   .:.: :    :   .:.  .:                               
NP_001 PTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLSWPGPANDSTLEAQYRRLLELDQVEGTG
             360       370        380       390       400       410

>>NP_001295164 (OMIM: 611435) docking protein 3 isoform   (440 aa)
 initn: 574 init1: 214 opt: 675  Z-score: 533.8  bits: 108.1 E(85289): 5.4e-23
Smith-Waterman score: 675; 37.8% identity (59.3% similar) in 386 aa overlap (1-375:4-379)

                  10        20        30        40          50     
pF1KB5    MDGAVMEGPLFLQSQRFGTKRWRKTWAVLYPASPHGVARLEFFDHK--GSSSGGGR-
          ..  . .: :. :  .:: : :::.::.:: ..: :::::: .. .  : ...: : 
NP_001 MDPLETPIKDGILYQQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDRS
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB5 -GSSRRLDCKVIRLAECVSVAPVTVETPPEPGATAFRLDTAQRSHLLAADAPSSAAWVQT
        : .:: . .:::::.:::: :.  :. :.  . :: : :..:::::::.     ::.  
NP_001 AGPGRRGERRVIRLADCVSVLPADGESCPRD-TGAFLLTTTERSHLLAAQ--HRQAWMGP
               70        80        90        100         110       

           120        130        140       150       160       170 
pF1KB5 LCRNAFP-KGSWTLAPTD-NPPKLSALEMLENSLYSPTWEGSQFWVTVQRTEAAERCGLH
       .:. :::  :  . . :: . :: . . : :::.::   : ..: :.::::::: :: :.
NP_001 ICQLAFPGTGEASSGSTDAQSPKRGLVPMEENSIYSSWQEVGEFPVVVQRTEAATRCQLK
       120       130       140       150       160       170       

             180       190       200       210       220       230 
pF1KB5 GSYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTF
       :  .: .  . . :     ...  . : :::: .::..: :: .::::::::: :: : :
NP_001 GPALLVLGPDAIQL----REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGEGLF
       180       190           200       210       220       230   

             240       250          260       270        280       
pF1KB5 TFQTAQGNDIFQAVETAIHRQKAQGKA---GQGHDVLRADSHEGEVAEGKL-PSPPGPQE
       .:.:  . :. .::  :: ::. .       :   . :: :  .  . :.:   ::::. 
NP_001 AFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEP
           240       250       260       270       280       290   

       290       300        310       320       330       340      
pF1KB5 LLDSPPALYAEPL-DSLRIAPCPSQDSLYSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQ
         .    : :::  .:: .   :  ..: :    :.  .:. :   .. :: .:     .
NP_001 PTSRKMHL-AEPGPQSLPLLLGPEPNDLASGLYASVCKRAS-GPPGNEHLYENLCVLEAS
           300        310       320       330        340       350 

        350       360       370       380       390       400      
pF1KB5 QLLKAKLTDPKEDPIYDEPEGLAPVPPQGLYDLPREPKDAWWCQARVKEEGYELPYNPAT
         :..   .:.: :    :   .:.  .:                               
NP_001 PTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLSWPGPANDSTLEAQYRRLLELDQVEGTG
             360       370        380       390       400       410




481 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 23:20:04 2016 done: Sat Nov  5 23:20:06 2016
 Total Scan time: 11.650 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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