FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2654, 279 aa 1>>>pF1KE2654 279 - 279 aa - 279 aa Library: /omim/omim.rfq.tfa 60892289 residues in 85410 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6170+/-0.000408; mu= 18.4848+/- 0.025 mean_var=59.8911+/-12.267, 0's: 0 Z-trim(110.9): 43 B-trim: 0 in 0/53 Lambda= 0.165727 statistics sampled from 19313 (19356) to 19313 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.586), E-opt: 0.2 (0.227), width: 16 Scan time: 5.940 The best scores are: opt bits E(85410) NP_073732 (OMIM: 611813) elongation of very long c ( 279) 1930 470.0 2.1e-132 NP_001243328 (OMIM: 611813) elongation of very lon ( 279) 1930 470.0 2.1e-132 NP_001243331 (OMIM: 611813) elongation of very lon ( 198) 1407 344.9 7.2e-95 NP_001243330 (OMIM: 611813) elongation of very lon ( 252) 1235 303.8 2.1e-82 XP_011541953 (OMIM: 614451) PREDICTED: elongation ( 281) 1194 294.1 2e-79 XP_005248663 (OMIM: 614451) PREDICTED: elongation ( 281) 1194 294.1 2e-79 XP_016865374 (OMIM: 614451) PREDICTED: elongation ( 281) 1194 294.1 2e-79 XP_006714758 (OMIM: 614451) PREDICTED: elongation ( 281) 1194 294.1 2e-79 NP_079206 (OMIM: 614451) elongation of very long c ( 281) 1194 294.1 2e-79 NP_001098028 (OMIM: 614451) elongation of very lon ( 281) 1194 294.1 2e-79 XP_016865375 (OMIM: 614451) PREDICTED: elongation ( 268) 1158 285.4 7.6e-77 XP_016865376 (OMIM: 614451) PREDICTED: elongation ( 268) 1158 285.4 7.6e-77 XP_005248664 (OMIM: 614451) PREDICTED: elongation ( 268) 1158 285.4 7.6e-77 NP_001284546 (OMIM: 614451) elongation of very lon ( 268) 1158 285.4 7.6e-77 NP_001284547 (OMIM: 614451) elongation of very lon ( 194) 916 227.5 1.5e-59 NP_073563 (OMIM: 605512) elongation of very long c ( 314) 752 188.4 1.4e-47 NP_001288785 (OMIM: 611805,615957) elongation of v ( 299) 633 160.0 5e-39 NP_068586 (OMIM: 611805,615957) elongation of very ( 299) 633 160.0 5e-39 NP_060240 (OMIM: 611814) elongation of very long c ( 296) 599 151.8 1.4e-36 XP_011513019 (OMIM: 611814) PREDICTED: elongation ( 297) 599 151.8 1.4e-36 XP_011513018 (OMIM: 611814) PREDICTED: elongation ( 326) 599 151.9 1.5e-36 NP_001229757 (OMIM: 611805,615957) elongation of v ( 326) 479 123.2 6.5e-28 NP_001229759 (OMIM: 611805,615957) elongation of v ( 262) 386 100.9 2.7e-21 NP_689523 (OMIM: 611815) elongation of very long c ( 270) 296 79.3 8.4e-15 XP_011538547 (OMIM: 611815) PREDICTED: elongation ( 270) 296 79.3 8.4e-15 XP_011530536 (OMIM: 611546) PREDICTED: elongation ( 265) 269 72.9 7.2e-13 XP_011530535 (OMIM: 611546) PREDICTED: elongation ( 265) 269 72.9 7.2e-13 NP_001124193 (OMIM: 611546) elongation of very lon ( 265) 269 72.9 7.2e-13 NP_076995 (OMIM: 611546) elongation of very long c ( 265) 269 72.9 7.2e-13 XP_011530537 (OMIM: 611546) PREDICTED: elongation ( 181) 226 62.5 6.7e-10 XP_016866474 (OMIM: 611814) PREDICTED: elongation ( 150) 170 49.0 6.3e-06 >>NP_073732 (OMIM: 611813) elongation of very long chain (279 aa) initn: 1930 init1: 1930 opt: 1930 Z-score: 2498.0 bits: 470.0 E(85410): 2.1e-132 Smith-Waterman score: 1930; 100.0% identity (100.0% similar) in 279 aa overlap (1-279:1-279) 10 20 30 40 50 60 pF1KE2 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 FMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 FMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 ELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 ELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 YYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_073 YYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYG 190 200 210 220 230 240 250 260 270 pF1KE2 TIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN ::::::::::::::::::::::::::::::::::::::: NP_073 TIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN 250 260 270 >>NP_001243328 (OMIM: 611813) elongation of very long ch (279 aa) initn: 1930 init1: 1930 opt: 1930 Z-score: 2498.0 bits: 470.0 E(85410): 2.1e-132 Smith-Waterman score: 1930; 100.0% identity (100.0% similar) in 279 aa overlap (1-279:1-279) 10 20 30 40 50 60 pF1KE2 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 FMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 ELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 YYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYG 190 200 210 220 230 240 250 260 270 pF1KE2 TIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN ::::::::::::::::::::::::::::::::::::::: NP_001 TIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN 250 260 270 >>NP_001243331 (OMIM: 611813) elongation of very long ch (198 aa) initn: 1407 init1: 1407 opt: 1407 Z-score: 1824.2 bits: 344.9 E(85410): 7.2e-95 Smith-Waterman score: 1407; 100.0% identity (100.0% similar) in 198 aa overlap (82-279:1-198) 60 70 80 90 100 110 pF1KE2 NRKPFQLRGFMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVA :::::::::::::::::::::::::::::: NP_001 MSGWLSTYTWRCDPVDYSNSPEALRMVRVA 10 20 30 120 130 140 150 160 170 pF1KE2 WLFLFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WLFLFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMIN 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE2 SSVHVIMYLYYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SSVHVIMYLYYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPV 100 110 120 130 140 150 240 250 260 270 pF1KE2 IIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN :::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IIHLIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN 160 170 180 190 >>NP_001243330 (OMIM: 611813) elongation of very long ch (252 aa) initn: 1220 init1: 1220 opt: 1235 Z-score: 1600.5 bits: 303.8 E(85410): 2.1e-82 Smith-Waterman score: 1666; 90.3% identity (90.3% similar) in 279 aa overlap (1-279:1-252) 10 20 30 40 50 60 pF1KE2 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRKPFQLRG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 FMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLFLFSKFI ::::::::::::::::::: :::::::::::::: NP_001 FMIVYNFSLVALSLYIVYE---------------------------MVRVAWLFLFSKFI 70 80 90 130 140 150 160 170 180 pF1KE2 ELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSVHVIMYL 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE2 YYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIHLIWMYG 160 170 180 190 200 210 250 260 270 pF1KE2 TIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN ::::::::::::::::::::::::::::::::::::::: NP_001 TIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN 220 230 240 250 >>XP_011541953 (OMIM: 614451) PREDICTED: elongation of v (281 aa) initn: 1231 init1: 1185 opt: 1194 Z-score: 1546.9 bits: 294.1 E(85410): 2e-79 Smith-Waterman score: 1194; 59.2% identity (86.8% similar) in 265 aa overlap (5-269:11-274) 10 20 30 40 50 pF1KE2 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK :.::.. .: ::::.. . ::.::: .: .: ::::: ::::..: ::: XP_011 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 PFQLRGFMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLF ::.:. ::.::: .: .:.:. :::.:::: :..::: :::: :: ::::.:. ::. XP_011 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 LFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSV :::::::.::..:.::::..::::::::::...::.::.:::.: ::.:.:::..:..: XP_011 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 HVIMYLYYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIH ::.:: ::::::.::. : ::::::..:..::.:::.:..::::..:: .:.::.::. XP_011 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC 190 200 210 220 230 240 240 250 260 270 pF1KE2 LIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN .: :. .:..:: .:::..::::.:::.... :: XP_011 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVK-NGTCKNKDN 250 260 270 280 >>XP_005248663 (OMIM: 614451) PREDICTED: elongation of v (281 aa) initn: 1231 init1: 1185 opt: 1194 Z-score: 1546.9 bits: 294.1 E(85410): 2e-79 Smith-Waterman score: 1194; 59.2% identity (86.8% similar) in 265 aa overlap (5-269:11-274) 10 20 30 40 50 pF1KE2 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK :.::.. .: ::::.. . ::.::: .: .: ::::: ::::..: ::: XP_005 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 PFQLRGFMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLF ::.:. ::.::: .: .:.:. :::.:::: :..::: :::: :: ::::.:. ::. XP_005 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 LFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSV :::::::.::..:.::::..::::::::::...::.::.:::.: ::.:.:::..:..: XP_005 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 HVIMYLYYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIH ::.:: ::::::.::. : ::::::..:..::.:::.:..::::..:: .:.::.::. XP_005 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC 190 200 210 220 230 240 240 250 260 270 pF1KE2 LIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN .: :. .:..:: .:::..::::.:::.... :: XP_005 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVK-NGTCKNKDN 250 260 270 280 >>XP_016865374 (OMIM: 614451) PREDICTED: elongation of v (281 aa) initn: 1231 init1: 1185 opt: 1194 Z-score: 1546.9 bits: 294.1 E(85410): 2e-79 Smith-Waterman score: 1194; 59.2% identity (86.8% similar) in 265 aa overlap (5-269:11-274) 10 20 30 40 50 pF1KE2 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK :.::.. .: ::::.. . ::.::: .: .: ::::: ::::..: ::: XP_016 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 PFQLRGFMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLF ::.:. ::.::: .: .:.:. :::.:::: :..::: :::: :: ::::.:. ::. XP_016 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 LFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSV :::::::.::..:.::::..::::::::::...::.::.:::.: ::.:.:::..:..: XP_016 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 HVIMYLYYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIH ::.:: ::::::.::. : ::::::..:..::.:::.:..::::..:: .:.::.::. XP_016 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC 190 200 210 220 230 240 240 250 260 270 pF1KE2 LIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN .: :. .:..:: .:::..::::.:::.... :: XP_016 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVK-NGTCKNKDN 250 260 270 280 >>XP_006714758 (OMIM: 614451) PREDICTED: elongation of v (281 aa) initn: 1231 init1: 1185 opt: 1194 Z-score: 1546.9 bits: 294.1 E(85410): 2e-79 Smith-Waterman score: 1194; 59.2% identity (86.8% similar) in 265 aa overlap (5-269:11-274) 10 20 30 40 50 pF1KE2 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK :.::.. .: ::::.. . ::.::: .: .: ::::: ::::..: ::: XP_006 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 PFQLRGFMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLF ::.:. ::.::: .: .:.:. :::.:::: :..::: :::: :: ::::.:. ::. XP_006 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 LFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSV :::::::.::..:.::::..::::::::::...::.::.:::.: ::.:.:::..:..: XP_006 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 HVIMYLYYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIH ::.:: ::::::.::. : ::::::..:..::.:::.:..::::..:: .:.::.::. XP_006 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC 190 200 210 220 230 240 240 250 260 270 pF1KE2 LIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN .: :. .:..:: .:::..::::.:::.... :: XP_006 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVK-NGTCKNKDN 250 260 270 280 >>NP_079206 (OMIM: 614451) elongation of very long chain (281 aa) initn: 1231 init1: 1185 opt: 1194 Z-score: 1546.9 bits: 294.1 E(85410): 2e-79 Smith-Waterman score: 1194; 59.2% identity (86.8% similar) in 265 aa overlap (5-269:11-274) 10 20 30 40 50 pF1KE2 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK :.::.. .: ::::.. . ::.::: .: .: ::::: ::::..: ::: NP_079 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 PFQLRGFMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLF ::.:. ::.::: .: .:.:. :::.:::: :..::: :::: :: ::::.:. ::. NP_079 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 LFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSV :::::::.::..:.::::..::::::::::...::.::.:::.: ::.:.:::..:..: NP_079 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 HVIMYLYYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIH ::.:: ::::::.::. : ::::::..:..::.:::.:..::::..:: .:.::.::. NP_079 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC 190 200 210 220 230 240 240 250 260 270 pF1KE2 LIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN .: :. .:..:: .:::..::::.:::.... :: NP_079 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVK-NGTCKNKDN 250 260 270 280 >>NP_001098028 (OMIM: 614451) elongation of very long ch (281 aa) initn: 1231 init1: 1185 opt: 1194 Z-score: 1546.9 bits: 294.1 E(85410): 2e-79 Smith-Waterman score: 1194; 59.2% identity (86.8% similar) in 265 aa overlap (5-269:11-274) 10 20 30 40 50 pF1KE2 MEAVVNLYQEVMKHADPRIQGYPLMGSPLLMTSILLTYVYFVLSLGPRIMANRK :.::.. .: ::::.. . ::.::: .: .: ::::: ::::..: ::: NP_001 MAFSDLTSRTVHLYDNWIKDADPRVEDWLLMSSPLPQTILLGFYVYFVTSLGPKLMENRK 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 PFQLRGFMIVYNFSLVALSLYIVYEFLMSGWLSTYTWRCDPVDYSNSPEALRMVRVAWLF ::.:. ::.::: .: .:.:. :::.:::: :..::: :::: :: ::::.:. ::. NP_001 PFELKKAMITYNFFIVLFSVYMCYEFVMSGWGIGYSFRCDIVDYSRSPTALRMARTCWLY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 LFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSWWWGVKIAPGGMGSFHAMINSSV :::::::.::..:.::::..::::::::::...::.::.:::.: ::.:.:::..:..: NP_001 YFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPWTWWFGVKFAAGGLGTFHALLNTAV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 HVIMYLYYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLVSLHISQYYFMSSCNYQYPVIIH ::.:: ::::::.::. : ::::::..:..::.:::.:..::::..:: .:.::.::. NP_001 HVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFVIVAIHISQFFFMEDCKYQFPVFAC 190 200 210 220 230 240 240 250 260 270 pF1KE2 LIWMYGTIFFMLFSNFWYHSYTKGKRLPRALQQNGAPGIAKVKAN .: :. .:..:: .:::..::::.:::.... :: NP_001 IIMSYSFMFLLLFLHFWYRAYTKGQRLPKTVK-NGTCKNKDN 250 260 270 280 279 residues in 1 query sequences 60892289 residues in 85410 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Dec 1 15:09:57 2016 done: Thu Dec 1 15:09:58 2016 Total Scan time: 5.940 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]