GENSCAN 1.0	Date run:  6-Nov-116	Time: 19:31:44

Sequence gi568815597r:10361493_10572458 : 210966 bp : 46.17% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    200    333  134  1  2   94   88   124 0.770  12.44
 1.02 Intr +   1791   1852   62  0  2   76  115     4 0.920   0.28
 1.03 Intr +   3608   3807  200  0  2   86    3   154 0.514   5.77
 1.04 Intr +   4049   4156  108  1  0   83   70   196 0.589  17.78
 1.05 Intr +   6975   7046   72  2  0  105  105    69 0.995   9.90
 1.06 Intr +   9649   9770  122  0  2   77  100    34 0.982   2.79
 1.07 Intr +  12824  12973  150  2  0   79  113    98 0.995  10.68
 1.08 Intr +  13362  13554  193  0  1   85   73   156 0.959  13.29
 1.09 Intr +  13763  13881  119  1  2   87  107   164 0.962  17.46
 1.10 Term +  15053  15095   43  2  1  130   42    29 0.828  -0.87
 1.11 PlyA +  15328  15333    6                              -0.45

 2.00 Prom +  19468  19507   40                              -2.86
 2.01 Init +  37482  37633  152  2  2   69   81    95 0.761   6.53
 2.02 Intr +  38137  38212   76  1  1  114   91   190 0.995  21.42
 2.03 Intr +  38901  39080  180  2  0  102   73   203 0.987  20.26
 2.04 Intr +  41579  41644   66  1  0   77   98    79 0.987   6.90
 2.05 Intr +  42669  42787  119  2  2   76   89    46 0.753   2.76
 2.06 Intr +  46579  46618   40  1  1  123    0    59 0.695  -1.17
 2.07 Intr +  49926  50060  135  2  0  107   94   247 0.993  27.96
 2.08 Intr +  51570  51759  190  2  1   76   23   240 0.973  15.46
 2.09 Intr +  55495  55625  131  2  2   75   81   160 0.977  14.41
 2.10 Intr +  55776  55859   84  2  0   62   44    70 0.502   0.02
 2.11 Intr +  55884  56017  134  2  2   45  115   127 0.991  10.54
 2.12 Intr +  57334  57433  100  1  1   75   91   140 0.997  13.11
 2.13 Intr +  57925  58047  123  0  0   90  115    59 0.999   9.58
 2.14 Term +  58138  58257  120  0  0  117   43   115 0.999   8.37
 2.15 PlyA +  58631  58636    6                               1.05

 3.00 Prom +  61626  61665   40                              -3.16
 3.01 Init +  64859  64966  108  1  0   82   35   205 0.908  12.83
 3.02 Intr +  69011  69076   66  1  0   61   92    66 0.247   3.40
 3.03 Intr +  72350  72473  124  1  1   73   48   154 0.911  10.06
 3.04 Intr +  73165  73198   34  2  1  121   98    37 0.722   5.28
 3.05 Term +  78740  78878  139  2  1   58   41    64 0.138  -3.86
 3.06 PlyA +  79598  79603    6                               1.05

 4.00 Prom +  80743  80782   40                              -5.16
 4.01 Init +  88732  88830   99  0  0   65  105   209 0.987  18.57
 4.02 Term +  92493  92525   33  2  0   82   55    19 0.273  -4.41
 4.03 PlyA +  96411  96416    6                               1.05

 5.08 PlyA -  98453  98448    6                               1.05
 5.07 Term - 100210  99998  213  1  0   53   43   231 0.994  12.33
 5.06 Intr - 101717 101566  152  0  2  118   64   143 0.999  14.78
 5.05 Intr - 102128 101939  190  2  1   53   97   139 0.982  10.46
 5.04 Intr - 105840 105698  143  1  2   63  103   138 0.995  12.87
 5.03 Intr - 107846 107685  162  0  0   61  110   152 0.997  14.65
 5.02 Intr - 110432 110373   60  0  0   69   92    71 0.949   4.31
 5.01 Init - 110966 110786  181  2  1   69   76   203 0.905  16.55
 5.00 Prom - 111567 111528   40                              -5.66

 6.00 Prom + 111859 111898   40                              -6.36
 6.01 Init + 113475 113510   36  2  0   91  110    30 0.407   5.55
 6.02 Intr + 133782 133829   48  2  0  101  119    25 0.718   5.78
 6.03 Intr + 134197 134229   33  0  0   83  115     3 0.477   0.92
 6.04 Term + 134421 134432   12  2  0  129   41    17 0.579  -0.70
 6.05 PlyA + 135508 135513    6                               1.05

 7.05 PlyA - 135606 135601    6                               1.05
 7.04 Term - 146384 146046  339  2  0   57   37   125 0.106  -1.16
 7.03 Intr - 149610 149526   85  2  1   10   59   134 0.072   2.52
 7.02 Intr - 165422 165190  233  2  2    6  100   145 0.028   4.07
 7.01 Init - 172118 172026   93  2  0   88  103    30 0.485   4.88
 7.00 Prom - 178118 178079   40                              -3.26

 8.07 PlyA - 178823 178818    6                               1.05
 8.06 Term - 179857 179790   68  2  2  123   45    41 0.055   1.40
 8.05 Intr - 188085 188047   39  1  0  118  101     9 0.722   3.40
 8.04 Intr - 190014 189877  138  1  0    2  100   136 0.738   6.64
 8.03 Intr - 192398 192216  183  0  0   35   81    86 0.529   2.36
 8.02 Intr - 194374 194324   51  2  0   83   94    14 0.288   0.38
 8.01 Init - 199672 199633   40  1  1   82   72    61 0.444   4.25
 8.00 Prom - 206770 206731   40                              -2.96


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  85653  85549  105  0  0   31   56   125 0.807   3.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:10361493_10572458|GENSCAN_predicted_peptide_1|400_aa
LDHCIQPAVITKDVCMVFYSRDAKISPPRSLRSLFGSGYSKSPDSNRVTGIYELSLCKMS
DTGSPGMQRRRRKILDTSVAYVRGEENLAGWRPRGDSLILEHQWELEKLELLHEVSRGRV
VQMQELSDKIAKISTTTFESAITPSESSGYDSGDIESLVDREKELATKCLQLLTHTFNRE
FSQVHGSVSDCKLSDISPIGRDPSESSFSSATLTPSSTCPSLVDSRSNSLDQKTPEANSR
ASSPCPEFEQFQIVPAVETPYLARAGKNEFLNLVPDIEEIRPSSVVSKKGYLHFKEPLYS
NWAKHFVVVRRPYVFIYNSDKDPVERGIINLSTAQVEYSEDQQAMVKTPNTFAVCTKHRG
VLLQALNDKDMNDWLYAFNPLLAGTIRSKLSRRCPSQSKY

>gi568815597r:10361493_10572458|GENSCAN_predicted_CDS_1|1203_bp
ctggatcattgcatccagccggctgtcatcaccaaggatgtgtgcatggtcttctactcc
cgagatgccaagatctcaccaccacgctctctgcgtagcctctttggcagcggctactca
aagtcaccagattcgaatcgagtcactggcatttacgaactcagcttatgcaaaatgtca
gacacaggtagtccaggtatgcagagaaggagaagaaaaatcttagatacgtcagtggca
tatgtgcggggagaagagaacttagcaggctggcggccccgtggagacagcctcatcctt
gagcaccagtgggagctggagaagctggagctcctacatgaggtatccaggggcagggtt
gttcagatgcaagaactctcggacaagattgccaaaatctcaaccactacctttgaaagc
gccatcacacctagcgagagcagtggctatgattcaggagacatcgaaagcctggtggac
cgagagaaagagctggctaccaagtgcctgcaacttctcacccacactttcaacagagaa
ttcagccaggtgcacggcagcgtcagtgactgtaagttgtctgatatctctccaattgga
cgggatccctctgagtccagtttcagcagtgccaccctcactccctcctccacctgtccc
tctctggtagactctaggagcaactctctggatcagaagaccccagaagccaattcccgg
gcctctagtccctgcccagaatttgaacagtttcagattgtcccagctgtggaaacacca
tatttggcccgagcaggaaaaaacgaatttctcaatcttgttccagatattgaagaaatt
agaccaagctcagtggtctctaagaaaggataccttcatttcaaggagcctctttacagt
aactgggctaaacattttgttgtcgtccgtcggccttatgtcttcatctataacagtgac
aaagaccctgtggagcgtggaatcattaacctgtccacagcacaggtggagtacagtgag
gaccagcaggccatggtgaagacaccaaacacctttgctgtctgcacaaagcaccgtggg
gtccttttgcaggccctcaatgacaaagacatgaacgactggttgtatgccttcaaccca
cttctagctggcacaatacggtcaaagctttcccgcagatgcccgagccagtcgaaatac
taa

>gi568815597r:10361493_10572458|GENSCAN_predicted_peptide_2|549_aa
MAPPPSIRLAGAEKPGVSGRSFWREPLRVFPSLVLRASPLFGSALSAAMAQADIALIGLA
VMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRII
LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGE
EGARYGPSLMPGGNKEAWPHIKTIFQGIAAKVGDEGAGHFVKMVHNGIEYGDMQLICEAY
HLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITANILKFQDTDGKHLLPKIRDSAGQKG
TGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQKFQFDGDKKSFLED
IRKNIGPSGISTADENKTGRHKAVTLLMAILALYASKIISYAQGFMLLRQAATEFGWTLN
YGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFFKSAVENCQDSWRRAVSTGV
QAGIPMPCFTTALSFYDGYRHEMLPASLIQAQRDYFGAHTYELLAKPGQFIHTNWTGHGG
TVSSSSYNA

>gi568815597r:10361493_10572458|GENSCAN_predicted_CDS_2|1650_bp
atggctccacccccttccattcgattggccggcgccgaaaagccgggcgtgagcggccgc
agtttctggagggagccgctgcgggtctttccctcactcgtcctccgcgcgtcgccgctc
ttcggttctgctctgtccgccgccatggcccaagctgacatcgcgctgatcggattggcc
gtcatgggccagaacttaattctgaacatgaatgaccacggctttgtggtctgtgctttt
aataggactgtctccaaagttgatgatttcttggccaatgaggcaaagggaaccaaagtg
gtgggtgcccagtccctgaaagagatggtctccaagctgaagaagccccggcggatcatc
ctcctggtgaaggctgggcaagctgtggatgatttcatcgagaaattggtaccattgttg
gatactggtgacatcatcattgacggaggaaattctgaatatagggacaccacaagacgg
tgccgagacctcaaggccaagggaattttatttgtggggagcggagtcagtggtggagag
gaaggggcccggtatggcccatcgctcatgccaggagggaacaaagaagcgtggccccac
atcaagaccatcttccaaggcattgctgcaaaagtgggagatgagggagcaggccacttc
gtgaagatggtgcacaacgggatagagtatggggacatgcagctgatctgtgaggcatac
cacctgatgaaagacgtgctgggcatggcgcaggacgagatggcccaggcctttgaggat
tggaataagacagagctagactcattcctgattgaaatcacagccaatattctcaagttc
caagacaccgatggcaaacacctgctgccaaagatcagggacagcgcggggcagaagggc
acagggaagtggaccgccatctccgccctggaatacggcgtacccgtcaccctcattgga
gaagctgtctttgctcggtgcttatcatctctgaaggatgagagaattcaagctagcaaa
aagctgaagggtccccagaagttccagtttgatggtgataagaaatcattcctggaggac
attcggaagaatattggcccttctgggatctccactgctgatgagaataagactggtaga
cataaggcggtcactctcctaatggcaatcctagcactctacgcttccaagatcatctct
tacgctcaaggctttatgctgctaaggcaggcagccaccgagtttggctggactctcaat
tatggtggcatcgccctgatgtggagagggggctgcatcattagaagtgtattcctagga
aagataaaggatgcatttgatcgaaacccggaacttcagaacctcctactggacgacttc
tttaagtcagctgttgaaaactgccaggactcctggcggcgggcagtcagcactggggtc
caggctggcattcccatgccctgttttaccactgccctctccttctatgacgggtacaga
catgagatgcttccagccagcctcatccaggctcagcgggattacttcggggctcacacc
tatgaactcttggccaaaccagggcagtttatccacaccaactggacaggccatggtggc
accgtgtcatcctcgtcatacaatgcctga

>gi568815597r:10361493_10572458|GENSCAN_predicted_peptide_3|156_aa
MRPHSPALGWSMGLGAVEQGATLIGEARATQEPTEWGRPAVMEEEAETEEQQRFSYQQRL
KAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARMGYLEIPAS
LKSDRELLCFIKTLNNTKHFGDLLLPFLQTCEKNHN

>gi568815597r:10361493_10572458|GENSCAN_predicted_CDS_3|471_bp
atgcgcccacactccccagcccttgggtggtcgatgggactgggcgccgtggagcagggg
gccacgctcatcggggaggctcgggccacacaggagcccacggagtggggtcggcccgca
gtgatggaggaggaggcggagaccgaggagcagcagcgattctcttaccaacagaggcta
aaggcagcagttcactatactgtgggttgtctttgcgaggaagttgcattggacaaagag
atgcagttcagcaaacagaccattgcggccatttcggagctgactttccgacagtgtgaa
aattttgccaaagaccttgaaatgtttgcaaggatgggctacttagagatccctgctagt
ttgaagtctgaccgtgaacttctgtgtttcatcaaaactttaaataataccaaacatttt
ggtgacttgcttctgccctttctgcagacatgcgaaaagaaccacaattaa

>gi568815597r:10361493_10572458|GENSCAN_predicted_peptide_4|43_aa
MPLSPGLLLLLLSGATATAALPLEGGPTGRDSEDLAPEQLPNC

>gi568815597r:10361493_10572458|GENSCAN_predicted_CDS_4|132_bp
atgccattgtcccccggcctcctgctgctgctgctctccggggccacggccaccgctgcc
ctgcccctggagggtggccccaccggccgagacagcgaggatttggcaccagaacagctc
cctaactgctga

>gi568815597r:10361493_10572458|GENSCAN_predicted_peptide_5|366_aa
MEVTGDAGVPESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSKGWLGTPGEGVGEPGP
GTYAGKRELLLTISGGPDKEPCDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSNTKF
VALASNEKWAYNNSDGGTAWISQESFDVDETDSGAGLKWKNVARQLKEDLSSIILLSEED
LQMLVDAPCSDLAQELRQSCATVQRLQHTLQQVLDQREEVRQSKQLLQLYLQALEKEGSL
LSKQEESKAAFGEEVDAVDTGISRETSSDVALASHILTALREKQAPELSLSSQDLELVTK
EDPKALAVALNWDIKKTETVQEACERELALRLQQTQSLHSLRSISASKASPPGDLQNPKR
ARQDPT

>gi568815597r:10361493_10572458|GENSCAN_predicted_CDS_5|1101_bp
atggaggtgaccggggacgccggggtaccagaatctggcgagatccggactctaaagccg
tgtctgctgcgccgcaactacagccgcgaacagcacggcgtggccgcctcctgcctcgaa
gacctgaggagcaagggttggctcgggaccccgggcgagggtgtgggggagccagggccg
ggaacctatgcaggaaagagggagctgctactgaccatttctggaggtccagacaaggaa
ccctgtgacattctggccattgataagtccctgacaccagtcaccctggtcctggcagag
gatggcaccatagtggatgatgacgattactttctgtgtctaccttccaatactaagttt
gtggcattggctagtaatgagaaatgggcatacaacaattcagatggaggtacagcttgg
atttcccaagagtcctttgatgtagatgaaacagacagcggggcagggttgaagtggaag
aatgtggccaggcagctgaaagaagatctgtccagcatcatcctcctatcagaggaggac
ctccagatgcttgttgacgctccctgctcagacctggctcaggaactacgtcagagttgt
gccaccgtccagcggctgcagcacacactccaacaggtgcttgaccaaagagaggaagtg
cgtcagtccaagcagctcctgcagctgtacctccaggctttggagaaagagggcagcctc
ttgtcaaagcaggaagagtccaaagctgcctttggtgaggaggtggatgcagtagacacg
ggtatcagcagagagacctcctcggacgttgcgctggcgagccacatccttactgcactg
agggagaagcaggctccagagctgagcttatctagtcaggatttggagttggttaccaag
gaagaccccaaagcactggctgttgccttgaactgggacataaagaagacggagactgtt
caggaggcctgtgagcgggagctcgccctgcgcctgcagcagacgcagagcttgcattct
ctccggagcatctcagcaagcaaggcctcaccacctggtgacctgcagaatcctaagcga
gccagacaggatcccacatag

>gi568815597r:10361493_10572458|GENSCAN_predicted_peptide_6|42_aa
MASSEQAEQPSQPSSTPGSENVLPREPLGASASVVFKEQGLL

>gi568815597r:10361493_10572458|GENSCAN_predicted_CDS_6|129_bp
atggcgtcctcggagcaggcagagcagccgagccagccaagctctactccaggaagtgaa
aatgtgctgcctcgagagccgctgggtgcgagcgcctcagtggtctttaaagaacagggc
ctgctgtaa

>gi568815597r:10361493_10572458|GENSCAN_predicted_peptide_7|249_aa
MECSVISNSFKKNVGDIAKNSINERIQFKHQTHQKTEESQQSRSATNGMPPSPRSCYRMS
IPNLKIQNPKCSKIQNFLSANMTVKGHAQRKCSLEHFGFGIFRFEMLNQQTSSSAACTFN
DAYRCTTATEQDVENEEVNFAALTLTMRNLWMLIETQIKDLPEGAEKVEIKDPGYCIFFT
YADSSDSLETCRHHFKSWSPEQIAQLSNLLPASKRQNNKRLLPPRSYQGHSTLLYRHHMK
RSYYLLSIP

>gi568815597r:10361493_10572458|GENSCAN_predicted_CDS_7|750_bp
atggagtgctctgtcattagtaattcatttaagaagaacgtgggggatatagcaaagaac
agcataaacgagcgaatccaatttaaacatcagacccaccagaaaacagaagaaagtcaa
caatcaagatctgctactaacgggatgccaccaagtcctagatcctgctacaggatgagc
atccctaatctgaaaatccaaaatccaaaatgctccaaaatccagaactttttgagtgcc
aacatgacagtcaaaggtcatgcacaaaggaaatgctcactggagcatttcggatttggg
attttcagatttgagatgctcaaccaacaaaccagcagctctgctgcctgcacatttaac
gatgcctatcggtgcaccacagctacggaacaggatgtggagaacgaggaggtgaacttt
gctgccttaactctgacaatgaggaatttgtggatgttgatagaaacacagataaaggat
ttacctgagggggcagagaaagtagaaataaaagatcctggatattgtattttctttact
tatgcggattccagtgactccctggagacctgcaggcaccactttaagagctggagtcca
gagcaaattgctcaattgtccaaccttctccccgccagcaagagacagaacaacaagcgg
ctgctgccccctagaagctaccaggggcatagcaccttgctatatagacatcacatgaaa
agatcctattatctcctctccatcccataa

>gi568815597r:10361493_10572458|GENSCAN_predicted_peptide_8|172_aa
MAVSEEVYAEVITEGQNEASSAVMMQRPATGVQGSPENCRGQISKQVDCHKQISGNTCRY
NREGQTQGRADEETDDKGVKRSFLEAEFSVEESPSRIRAAGIKLPNAPASSALCNDIHAN
GDELGFMEVRLLRMDLKGLPKGEPLIGKKKCSKTKPVLSPLVALTPEKGFYR

>gi568815597r:10361493_10572458|GENSCAN_predicted_CDS_8|519_bp
atggccgtatctgaggaggtatatgctgaagtaattacagagggccagaatgaagcaagt
tctgctgttatgatgcaacgcccggccacaggtgtgcagggaagccctgaaaattgccga
ggccagatcagcaaacaggttgactgtcacaagcagatcagtggaaacacatgcagatat
aacagagaaggacaaactcagggaagagcagatgaggaaacagatgacaaaggagtgaag
aggagctttctggaagctgagttttcagtggaagaatctccaagccgaatccgtgctgct
gggataaagctgcctaatgcaccagcctccagcgcgctgtgtaatgacatccacgctaat
ggagatgagctcggcttcatggaggttcgactcctgagaatggatcttaaaggactgcct
aaaggagagcctttgattgggaaaaaaaaatgttccaaaaccaaacccgttttgtctccc
ctggtagctctcactcctgagaaaggcttttaccgctaa