GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:28:57

Sequence gi568815597f:81736985_82091142 : 354158 bp : 35.81% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1604   1615   12  1  0   86   94    10 0.216   1.72
 1.02 Intr +  20071  20146   76  0  1   72   80    74 0.239   3.17
 1.03 Intr +  36511  36554   44  2  2   76   91    17 0.002  -2.16
 1.04 Term +  63010  63147  138  0  0  116   42   162 0.822  11.38
 1.05 PlyA +  63249  63254    6                               1.05

 2.04 PlyA -  64896  64891    6                              -0.45
 2.03 Term -  65750  65530  221  0  2   87   38   202 0.568  11.32
 2.02 Intr -  66075  65752  324  1  0   76   13   230 0.560   9.12
 2.01 Init -  71386  71326   61  1  1   79   84    26 0.933   2.76
 2.00 Prom -  72968  72929   40                              -1.35

 3.05 PlyA -  73198  73193    6                               1.05
 3.04 Term - 106984 106891   94  0  1   38   55   138 0.794   1.82
 3.03 Intr - 121725 121605  121  1  1   77   94   101 0.877   8.23
 3.02 Intr - 125804 125763   42  0  0   74  103    40 0.477   1.39
 3.01 Init - 134258 134111  148  2  1   87   23    87 0.461   2.40
 3.00 Prom - 134435 134396   40                              -3.65

 4.00 Prom + 152143 152182   40                              -7.05
 4.01 Init + 152547 152667  121  2  1   41   24   126 0.007   1.90
 4.02 Intr + 170033 170246  214  0  1   99   94   234 0.942  21.95
 4.03 Intr + 199744 199853  110  1  2   99   98    69 0.916   8.01
 4.04 Intr + 205985 206785  801  0  0   54  121   582 0.793  48.60
 4.05 Intr + 213205 213498  294  2  0   96   53   129 0.963   6.26
 4.06 Intr + 214034 214137  104  0  2   80   81    24 0.997  -0.13
 4.07 Intr + 214973 215158  186  1  0   54   75   210 0.999  15.26
 4.08 Intr + 218893 219076  184  0  1   34  111   182 0.999  13.54
 4.09 Intr + 229074 229199  126  1  0   87   91   161 0.999  16.03
 4.10 Intr + 229420 229625  206  2  2   90   95   116 0.998  10.50
 4.11 Intr + 231042 231215  174  2  0   82   92    60 0.928   5.01
 4.12 Intr + 232194 232403  210  2  0   88  103    89 0.986   8.59
 4.13 Intr + 233330 233550  221  1  2  106   94   121 0.699  10.68
 4.14 Intr + 243811 243855   45  1  0   59   82    75 0.567   0.61
 4.15 Intr + 244824 244992  169  0  1   86  106    17 0.935   2.33
 4.16 Intr + 247599 247727  129  2  0   53   92    72 0.855   4.07
 4.17 Intr + 248275 248371   97  0  1   45   86    24 0.955  -3.44
 4.18 Intr + 249917 250045  129  0  0  101   69    45 0.923   3.65
 4.19 Term + 253407 254161  755  1  2  147   37   695 0.999  62.91
 4.20 PlyA + 254202 254207    6                               1.05

 5.00 Prom + 283152 283191   40                              -3.75
 5.01 Init + 286639 286842  204  0  0   39   83   117 0.049   5.20
 5.02 Term + 309571 309762  192  0  0   77   38   198 0.731  10.14
 5.03 PlyA + 311277 311282    6                               1.05

 6.00 Prom + 331274 331313   40                              -6.05
 6.01 Init + 333751 333878  128  0  2   72  109   165 0.994  16.68
 6.02 Intr + 335165 335312  148  2  1   71   34    79 0.577   0.12
 6.03 Term + 335488 335562   75  0  0  117   54    70 0.706   3.36
 6.04 PlyA + 337114 337119    6                               1.05

 7.03 PlyA - 339135 339130    6                               1.05
 7.02 Term - 349086 349018   69  0  0   97   50    71 0.613   1.16
 7.01 Intr - 350053 349903  151  0  1   91   32   121 0.804   6.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  50098  49919  180  1  0   70   45   157 0.924   8.83
S.002 Init +  57394  57471   78  0  0   50   64    49 0.824  -0.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:81736985_82091142|GENSCAN_predicted_peptide_1|89_aa
MAVQLMFAITRDCVGVQPTKWNWLVKAFVEASRRKKDCPQLLLMLRSIVGSAWLFADIAN
REGQGSVFRGQEQRQFQCKEMRETDLTAL

>gi568815597f:81736985_82091142|GENSCAN_predicted_CDS_1|270_bp
atggcagttcagctaatgtttgctatcaccagagactgtgttggagtacagccaaccaaa
tggaattggctagtaaaagcttttgtggaggcaagtcgaaggaaaaaggattgcccacag
ttacttcttatgcttaggtccatcgtaggctctgcctggctgtttgctgacattgccaac
cgagaggggcaaggaagtgtgttcagaggacaagagcaaaggcagtttcaatgtaaggaa
atgagggaaacagacctaacagctctgtga

>gi568815597f:81736985_82091142|GENSCAN_predicted_peptide_2|201_aa
MVTFDIIKQCRHCWRVPTNQGPTRPAAALSLRLREALCPPRGPPGPRPLHPPDPRGRPGS
SSPAAPNRSQSRRRPDHIWLRFTVILASPHHLTTDEKEQQPSKTRPSPPPPSTSPELAPA
AQPPRSTYMRDRRAKRAGRWGGPGPQRPEQISSAEDALHTPPPQAPSERTGGTLRPQAFM
KLKNAWLREPHPNPLASAPGN

>gi568815597f:81736985_82091142|GENSCAN_predicted_CDS_2|606_bp
atggtaacttttgatattattaagcaatgtagacactgctggcgagttcctacaaaccaa
ggcccaacgcggcccgctgctgccctctcactgcggctccgggaggctctctgccctccc
cgtggcccgccgggtccccggcccctgcaccctcccgacccacgaggccgccctggcagc
agcagccccgccgctcccaatcgtagccagtcccggcggcggcccgaccacatctggctg
cgctttactgtcatcctcgcctccccacaccacctaaccactgacgagaaggaacagcaa
ccctcaaaaactcgtccaagccctcccccaccgtccacttcccccgaactcgctccagcc
gctcagcctccccgctccacttacatgcgggaccggagggcaaagcgggcgggacgctgg
ggtggccccgggccccagcgcccggagcaaataagctccgccgaggacgcgcttcacact
cctcctccccaggcccccagtgaaaggacgggcggaaccttgcgaccccaagcttttatg
aaattaaaaaatgcatggctacgggagcctcatcctaacccccttgccagcgcccccggc
aactag

>gi568815597f:81736985_82091142|GENSCAN_predicted_peptide_3|134_aa
MDEAGNHHSQQTVTRTENQTPHVLTHRWELNSENTWTQDGEHHTTGPVGDVFQCMGDTGR
GESECAKFSQSLTEVLNPNSDTLRNNTKSNTDPVQSVEAEHLKRPTGESTKTVDKQSFST
NEKEAKEDGIKKKA

>gi568815597f:81736985_82091142|GENSCAN_predicted_CDS_3|405_bp
atggacgaagctggaaaccatcattctcagcaaactgtcacaaggacagaaaaccaaaca
ccgcatgttctcactcatagatgggaactgaacagtgagaacacttggacacaggatggg
gaacatcacacaacagggcctgttggggatgtgtttcagtgcatgggagacactggtaga
ggcgaaagtgagtgtgctaaattttcacagtccctgacggaagtactcaaccccaattct
gatactttaagaaataacaccaagtcaaatactgaccctgtgcagtcggtggaagctgaa
catctaaagagacctactggtgaatcaacgaagactgtggataaacaaagtttttccaca
aatgaaaaagaggcaaaagaggatggaatcaagaagaaagcatga

>gi568815597f:81736985_82091142|GENSCAN_predicted_peptide_4|1424_aa
MGLKERSHCSHNIEVGGKAASVDIEAAASYAEDLAKIIDGGFSRAALPFGLVRRELSCEG
YSIDLRCPGSDVIMIESANYGRTDDKICDADPFQMENTDCYLPDAFKIMTQRCNNRTQCI
VVTGSDVFPDPCPGTYKYLEVQYECVPYIFVCPGTLKAIVDSPCIYEAEQKAGAWCKDPL
QAADKIYFMPWTPYRTDTLIEYASLEDFQNSRQTTTYKLPNRVDGTGFVVYDGAVFFNKE
RTRNIVKFDLRTRIKSGEAIINYANYHDTSPYRWGGKTDIDLAVDENGLWVIYATEQNNG
MIVISQLNPYTLRFEATWETVYDKRAASNAFMICGVLYVVRSVYQDNESETGKNSIDYIY
NTRLNRGEYVDVPFPNQYQYIAAVDYNPRDNQLYVWNNNFILRYSLEFGPPDPAQVPTTA
VTITSSAELFKTIISTTSTTSQKGPMSTTVAGSQEGSKGTKPPPAVSTTKIPPITNIFPL
PERFCEALDSKGIKWPQTQRGMMVERPCPKGTRGTASYLCMISTGTWNPKGPDLSNCTSH
WVNQLAQKIRSGENAASLANELAKHTKGPVFAGDVSSSVRLMEQLVDILDAQLQELKPSE
KDSAGRSYNKAIVDTVDNLLRPEALESWKHMNSSEQAHTATMLLDTLEEGAFVLADNLLE
PTRVSMPTENIVLEVAVLSTEGQIQDFKFPLGIKGAGSSIQLSANTVKQNSRNGLAKLVF
IIYRSLGQFLSTENATIKLGADFIGRNSTIAVNSHVISVSINKESSRVYLTDPVLFTLPH
IDPDNYFNANCSFWNYSERTMMGYWSTQGCKLVDTNKTRTTCACSHLTNFAILMAHREIA
YKDGVHELLLTVITWVGIVISLVCLAICIFTFCFFRGLQSDRNTIHKNLCINLFIAEFIF
LIGIDKTKYAIACPIFAGLLHFFFLAAFAWMCLEGVQLYLMLVEVFESEYSRKKYYYVAG
YLFPATVVGVSAAIDYKSYGTEKANYRVCDGYYNTDLPGSWVLGAFALLCLLGLTWSFGL
LFINEETIVMAYLFTIFNAFQGVFIFIFHCALQKKVRKEYGKCFRHSYCCGGLPTESPHS
SVKASTTRTSARYSSGTQSRIRRMWNDTVRKQSESSFISGDINSTSTLNQGMTGNYLLTN
PLLRPHGTNNPYNTLLAETVVCNAPSAPVFNSPGHSLNNARDTSAMDTLPLNGNFNNSYS
LHKGDYNDSVQVVDCGLSLNDTAFEKMIISELVHNNLRGSSKTHNLELTLPVKPVIGGSS
SEDDAIVADASSLMHSDNPGLELHHKELEAPLIPQRTHSLLYQPQKKVKSEGTDSYVSQL
TAEAEDHLQSPNRDSLYTSMPNLRDSPYPESSPDMEEDLSPSRRSENEDIYYKSMPNLGA
GHQLQMCYQISRGNSDGYIIPINKEGCIPEGDVREGQMQLVTSL

>gi568815597f:81736985_82091142|GENSCAN_predicted_CDS_4|4275_bp
atggggctgaaggaaagaagccattgttcccataacatagaagtgggaggtaaagcagca
agtgttgatatagaagctgcagcaagttatgcagaagatctagctaagatcattgatgga
ggtttcagcagagcagctttaccatttgggctggtgaggcgagaattatcctgtgaaggt
tattctatagatctgcgatgcccgggcagtgatgtcatcatgattgagagcgctaactat
ggtcggacggatgacaagatttgtgatgctgacccatttcagatggagaatacagactgc
tacctccccgatgccttcaaaattatgactcaaaggtgcaacaatcgaacacagtgtata
gtagttactgggtcagatgtgtttcctgatccatgtcctggaacatacaaataccttgaa
gtccaatatgaatgtgtcccttacatttttgtgtgtcctgggaccttgaaagcaattgtg
gactcaccatgtatatatgaagctgaacaaaaggcgggtgcttggtgcaaggaccctctt
caggctgcagataaaatttatttcatgccctggactccctatcgtaccgatactttaata
gaatatgcttctttagaagatttccaaaatagtcgccaaacaacaacatataaacttcca
aatcgagtagatggtactggatttgtggtgtatgatggtgctgtcttctttaacaaagaa
agaacgaggaatattgtgaaatttgacttgaggactagaattaagagtggcgaggccata
attaactatgccaactaccatgatacctcaccatacagatggggaggaaagactgatatc
gacctagcagttgatgaaaatggtttatgggtcatttacgccactgaacagaacaatgga
atgatagttattagccagctgaatccatacactcttcgatttgaagcaacgtgggagact
gtatacgacaaacgtgccgcatcaaatgcttttatgatatgcggagtcctctatgtggtt
aggtcagtttatcaagacaatgaaagtgaaacaggcaagaactcaattgattacatttat
aatacccgattaaaccgaggagaatatgtagatgttcccttccccaaccagtatcagtat
attgctgcagtggattacaatccaagagataaccaactttacgtgtggaacaataacttc
attttacgatattctctggagtttggtccacctgatcctgcccaagtgcctaccacagct
gtgacaataacttcttcagctgagctgttcaaaaccataatatcaaccacaagcactact
tcacagaaaggccccatgagcacaactgtagctggatcacaggaaggaagcaaagggaca
aaaccacctccagcagtttctacaaccaaaattccacctataacaaatatttttcccctg
ccagagagattctgtgaagcattagactccaaggggataaagtggcctcagacacaaagg
ggaatgatggttgaacgaccatgccctaagggaacaagaggaactgcctcatatctctgc
atgatttccactggaacatggaaccctaagggccccgatcttagcaactgtacctcacac
tgggtgaatcagctggctcagaagatcagaagcggagaaaatgctgctagtcttgccaat
gaactggctaaacataccaaagggccagtgtttgctggggatgtaagttcttcagtgaga
ttgatggagcagttggtggacatccttgatgcacagctgcaggaactgaaacctagtgaa
aaagattcagctggacggagttataacaaggcaattgttgacacagtggacaaccttctg
agacccgaagctttggaatcatggaaacatatgaattcttctgaacaagcacatactgca
acaatgttactcgatacattggaagaaggagcttttgtcctagctgacaatcttttagaa
ccaacaagggtctcaatgcccacagaaaatattgtcctggaagttgccgtactcagtaca
gaaggacagatccaagactttaaatttcctctgggcatcaaaggagcaggcagctcaatc
caactgtccgcaaataccgtcaaacagaacagcaggaatgggcttgcaaagttggtgttc
atcatttaccggagcctgggacagttccttagtacagaaaatgcaaccattaaactgggt
gctgattttattggtcgtaatagcaccattgcagtgaactctcacgtcatttcagtttca
atcaataaagagtccagccgagtatacctgactgatcctgtgctttttaccctgccacac
attgatcctgacaattatttcaatgcaaactgctccttctggaactactcagagagaact
atgatgggatattggtctacccagggctgcaagctggttgacactaataaaactcgaaca
acgtgtgcatgcagccacctaaccaattttgcaattctcatggcccacagggaaattgca
tataaagatggcgttcatgaattacttcttacagtcatcacctgggtgggaattgtcatt
tcccttgtttgcctggctatctgcatcttcaccttctgctttttccgtggcctacagagt
gaccgaaatactattcacaagaacctttgtatcaaccttttcattgctgaatttattttc
ctaataggcattgataagacaaaatatgcgattgcatgcccaatatttgcaggacttcta
cactttttctttttggcagcttttgcttggatgtgcctagaaggtgtgcagctctaccta
atgttagttgaagtttttgaaagtgaatattcaaggaaaaaatattactatgttgctggt
tacttgtttcctgccacagtggttggagtttcagctgctattgactataagagctatgga
acagaaaaagctaattaccgtgtttgtgatggctactataatacggacttacctgggtct
tgggtgcttggcgctttcgctcttctgtgtcttcttggcctcacctggtcctttgggttg
ctttttattaatgaggagactattgtgatggcatatctcttcactatatttaatgctttc
cagggagtgttcattttcatctttcactgtgctctccaaaagaaagtacgaaaagaatat
ggcaagtgcttcagacactcatactgctgtggaggcctcccaactgagagtccccacagt
tcagtgaaggcatcaaccaccagaaccagtgctcgctattcctctggcacacagagtcgt
ataagaagaatgtggaatgatactgtgagaaaacaatcagaatcttcttttatctcaggt
gacatcaatagcacttcaacacttaatcaaggaatgactggcaattacctactaacaaac
cctcttcttcgaccccacggcactaacaacccctataacacattgctcgctgaaacagtt
gtatgtaatgccccttcagctcctgtatttaactcaccaggacattcactgaacaatgcc
agggatacaagtgccatggatactctaccgctaaatggtaattttaacaacagctactcg
ctgcacaagggtgactataatgacagcgtgcaagttgtggactgtggactaagtctgaat
gatactgcttttgagaaaatgatcatttcagaattagtgcacaacaacttacggggcagc
agcaagactcacaacctcgagctcacgctaccagtcaaacctgtgattggaggtagcagc
agtgaagatgatgctattgtggcagatgcttcatctttaatgcacagcgacaacccaggg
ctggagctccatcacaaagaactcgaggcaccacttattcctcagcggactcactccctt
ctgtaccaaccccagaagaaagtgaagtccgagggaactgacagctatgtctcccaactg
acagcagaggctgaagatcacctacagtcccccaacagagactctctttatacaagcatg
cccaatcttagagactctccctatccggagagcagccctgacatggaagaagacctctct
ccctccaggaggagtgagaatgaggacatttactataaaagcatgccaaatcttggagct
ggccatcagcttcagatgtgctaccagatcagcaggggcaatagtgatggttatataatc
cccattaacaaagaagggtgtattccagaaggagatgttagagaaggacaaatgcagctg
gttacaagtctttaa

>gi568815597f:81736985_82091142|GENSCAN_predicted_peptide_5|131_aa
MRSSWIIPVGSKSNDKCRYKRHRRDAQRRAGHMKTEAETGVMQPQTKECFQPSEAGRGKE
GYPLRAFEVVTSFFYSTSILSTDKVLGSEIDVGKSKMNKADPQLPQDTLTDIDVENETRE
TSNSFKAFLSG

>gi568815597f:81736985_82091142|GENSCAN_predicted_CDS_5|396_bp
atgagatcatcctggattatcccagtgggctctaaatccaatgacaagtgtcgttataag
agacacaggagagatgcacagagaagagcaggccacatgaagacggaggccgagactgga
gtgatgcagccacagaccaaggaatgcttccagccatcagaagctggaaggggcaaggaa
ggatatccccttagagccttcgaggttgtgacttcattcttttattctacaagcatcctg
agcactgacaaagttttgggctctgagatagatgttggaaagtcaaagatgaataaggct
gatcctcaacttccacaagatacactcacagacatagatgtagaaaatgagactcgagag
acgagcaactcgttcaaggctttcttaagtggctaa

>gi568815597f:81736985_82091142|GENSCAN_predicted_peptide_6|116_aa
MVYGASEAIGQHQSLAAKPRRSGKESVREPWARVPGALGMAARKAGLAAKGEGEGVEGYL
PLPQESREGVETRREGVEVLAPSPEKRDLPLRKMKEIEIKRRERLKSGKDKVVEGQ

>gi568815597f:81736985_82091142|GENSCAN_predicted_CDS_6|351_bp
atggtctacggggcttccgaggcgatcgggcagcatcagtctttagccgctaagccgaga
agatctgggaaggagtcagtcagagagccttgggccagagttccaggggctctgggaatg
gctgccaggaaagcgggacttgccgctaagggtgaaggagaaggggttgaggggtacttg
cccctgccccaggaaagcagagaaggggtagagacaaggagagaaggggttgaggtactt
gccccttccccagaaaagcgggacttgccgctaaggaaaatgaaagaaattgaaattaag
agaagggagagattgaagagtggaaaggataaagtggttgagggacagtga

>gi568815597f:81736985_82091142|GENSCAN_predicted_peptide_7|73_aa
XKIIFHNDSLTVLPLIIISEAFRDRICGVLSSDANRMTKQQPHELIESQGEVKTGAKPLA
PLALQLADLSCRL

>gi568815597f:81736985_82091142|GENSCAN_predicted_CDS_7|222_bp
nnaaaaatcattttccacaatgactcactgacagttctccctctaatcatcatttctgaa
gcatttagggacaggatctgtggtgtcctctcctcagatgccaacagaatgacaaagcag
cagccacatgagctgatagagtcacaaggagaggttaagactggagctaaaccattggct
cccctggctctccagcttgctgacttatcctgcagactttga