GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:27:37

Sequence gi568815586r:11033288_11234244 : 200957 bp : 36.24% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  15610  15822  213  0  0   97   36   127 0.224   6.39
 1.02 Intr +  30334  30447  114  0  0   80   76    42 0.057   1.92
 1.03 Intr +  38751  38823   73  2  1   51   99     4 0.008  -4.14
 1.04 Intr +  38876  39163  288  0  0   96   61    96 0.099   3.99
 1.05 Term +  56126  56310  185  0  2   77   36   127 0.545   3.12
 1.06 PlyA +  57466  57471    6                               1.05

 2.00 Prom +  58708  58747   40                              -5.35
 2.01 Init +  58941  59163  223  2  1   55   96   124 0.239   8.67
 2.02 Term +  72074  72276  203  0  2   45   44   128 0.270   0.67
 2.03 PlyA +  74090  74095    6                               1.05

 3.00 Prom +  74190  74229   40                              -8.05
 3.01 Sngl +  78333  79538 1206  2  0   62   43   428 0.992  31.27
 3.02 PlyA +  79775  79780    6                               1.05

 4.00 Prom +  80893  80932   40                              -3.45
 4.01 Init +  81020  81223  204  1  0   66   72    99 0.530   5.00
 4.02 Intr +  96287  96385   99  1  0   57   40    98 0.200   1.29
 4.03 Term + 101226 101414  189  2  0  112   38    68 0.361   0.67
 4.04 PlyA + 101685 101690    6                               1.05

 5.03 PlyA - 101772 101767    6                               1.05
 5.02 Term - 115032 114500  533  1  2   67   40   231 0.039   9.62
 5.01 Init - 138312 138135  178  0  1   94   90   350 0.966  35.27
 5.00 Prom - 142563 142524   40                              -4.95

 6.07 PlyA - 143541 143536    6                               1.05
 6.06 Term - 148655 148487  169  1  1   17   43   159 0.180   0.67
 6.05 Intr - 156557 156426  132  1  0   93   26    89 0.116   2.04
 6.04 Intr - 163084 162910  175  2  1   85   19    91 0.175  -0.02
 6.03 Intr - 173344 173193  152  0  2   93   88    12 0.197   0.59
 6.02 Intr - 176131 175964  168  0  0   75   91    65 0.236   3.64
 6.01 Init - 178898 178861   38  2  2   41   81    54 0.220  -0.47
 6.00 Prom - 179804 179765   40                              -3.65

 7.00 Prom + 181111 181150   40                              -6.15
 7.01 Init + 185257 185309   53  0  2   78   82    63 0.667   5.38
 7.02 Term + 188230 188752  523  1  1  -16   48   338 0.978  12.16
 7.03 PlyA + 189083 189088    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  44596  44694   99  0  0   83   50    98 0.839   2.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:11033288_11234244|GENSCAN_predicted_peptide_1|290_aa
VEKNKVGEIGSLEQMKYAEASNTQMLKCLVIAETLEPKILTSNLCEAKLNTVAYQCNNMT
QSKPTLDTTRAKNITDKSTLLNQECGKYVQPCCVRNSGAKSKNRWEIAKQLTRILFSGSR
EYPASSFCVTGTTVFVETSSHHVAQGGLELLASIDIPNCAYQSSGIASKSHHTKPALGVF
EGQMLPRFLTHVHPKVDLISLLLLPLPEHVIEMDKHGSWQDSHLLPDLQTLLEKVLEAKY
THLMTVMLSLSPHCEVAASRAIPDITTHCFTFLPVSISTRPCHFCLEFDF

>gi568815586r:11033288_11234244|GENSCAN_predicted_CDS_1|873_bp
gtggagaaaaataaggttggagaaattggcagtcttgagcaaatgaaatatgctgaggct
agtaacacccagatgctgaaatgcttggttattgctgagacattagaaccaaaaattctt
acttctaatctatgtgaagccaaattaaacacagttgcataccaatgtaataatatgacc
cagagtaaaccaactctggacaccaccagagcaaaaaacataactgataaatcaactctg
ctaaaccaagagtgtgggaaatatgtacaaccttgttgtgtcaggaattcaggagccaaa
agcaaaaacagatgggaaattgcaaagcaactgactcgcatattgttttcaggttcaagg
gagtatcctgcctcatccttctgtgtaactgggactacagtttttgtagagacaagctct
caccatgtagcccagggtggtctggaactcctggcctcaatagatattcccaactgtgcc
taccaaagttccgggattgcaagcaagagccatcataccaagcctgcactgggagttttt
gaaggtcagatgctacctagatttttgactcatgtacatcccaaggtggatctaatcagt
ttgctgttattacctcttcctgaacatgtaattgaaatggacaaacatggcagctggcag
gactctcaccttcttcctgacctgcagacccttctggaaaaagtgctggaagccaagtac
acgcatctgatgaccgtcatgctgtctctctcacctcactgtgaagtggctgccagcaga
gccataccagacatcaccacacattgtttcacatttcttcctgtctcaatttccacacgt
ccttgccatttttgtcttgaatttgacttctaa

>gi568815586r:11033288_11234244|GENSCAN_predicted_peptide_2|141_aa
MSEQTKKIFLNAGVVSGIGSCRWVRGLADFKREPLTFTVSVAALKDGVDPKSEQQQGLLR
REKGQSFHRVKGNPGLDLNIYVYLIPEFAGMSLFLFKFCDQCQTGKHLNMPVDEINAVFM
ENMMISKTAQINSYSNTTSLL

>gi568815586r:11033288_11234244|GENSCAN_predicted_CDS_2|426_bp
atgtctgaacagacaaaaaaaatttttttaaatgctggtgttgtgtccggaattggttcc
tgcaggtgggttcgtggtctcgctgacttcaaaagggagccactgaccttcacggtgagt
gttgctgctcttaaagatggtgtggacccaaagagtgagcaacagcaaggtttattgaga
agagagaaaggacaaagcttccacagagtgaaaggcaacccaggtcttgaccttaacatc
tatgtgtacctgattcctgaatttgcaggaatgtccttgttcctttttaaattctgtgac
caatgtcaaacaggaaagcatctcaatatgccagtggatgaaatcaatgctgtctttatg
gaaaacatgatgatttccaaaacagctcaaattaactcctattcaaacacaacgtccttg
ctgtaa

>gi568815586r:11033288_11234244|GENSCAN_predicted_peptide_3|401_aa
MYQNLWDTAKAVFRGKFIALNAHRRKWERSKVDTLASQLKELEKQEQTNLKASRRQEITK
VRAQLKEIETPKTLQKINESRSWFFEKFNKIERQLARLVKKKRENNPIDTIKNNKGDITT
DFREIQTIIREYYKHLYANTLENLEEMDKILDTYNIPSLNQEEVKSLNRPITSSETETVI
NSLATKKSPGTDIFTTKFYQRYKEEMVPFFLKLFKTLEKEGLLLNSFYEASIILIPKPDR
DTAKRENFRPISLMNIDAKILNKILASQIQQHIKRLIHQDQVVFNPGMQGWFNICKSINI
IHHINRTNDKNHMIISTDAEKAFDKIQHAFMLKTLKKLGTDGMYLKILSAIYDKPTANIL
NGQKREAFPLKIGTKQGCHLSPLLFNIVLEILARTIRKRKK

>gi568815586r:11033288_11234244|GENSCAN_predicted_CDS_3|1206_bp
atgtaccagaatctctgggacacagctaaagcagtgtttagagggaaatttatagcacta
aatgcccacaggagaaagtgggaaagatctaaagttgacaccctagcatcacaattaaaa
gaactggagaagcaagagcaaacaaatttaaaagctagcagaagacaagagataactaag
gtcagagcacaactgaaggagatagaaacacctaaaacccttcagaaaatcaatgaatcc
aggagctggttttttgaaaagttcaacaaaatagaaagacagctagccagactagtaaag
aagaaaagagagaataatccaatagacacaataaaaaataataaaggagatattaccact
gacttcagagaaatacaaactatcatcagagaatactataaacacctctatgcaaatacg
ctagaaaatttagaagaaatggataaaatactggacacatacaacatcccaagtctaaac
caggaagaagtcaaatccctgaatagaccaataacaagttctgaaactgagacagtaatt
aatagcctagcaaccaaaaaaagtccaggaacagacatattcacaaccaaattctaccag
aggtacaaagaggagatggtaccattctttctgaaactattcaaaacactggaaaaagag
ggactactccttaactcattttatgaggccagcatcatcctgattccaaaacctgataga
gacacagcaaaaagagaaaattttaggccaatatccttgatgaacatcgatgcgaaaatc
ctcaataaaatactggcaagccaaatccagcagcatataaaaaggcttatccaccaagat
caagtcgtcttcaaccctgggatgcaaggctggttcaacatatgcaaatcaataaacata
atccatcacataaacagaaccaatgacaaaaaccacatgattatctcaacagatgcagaa
aaggcctttgataaaattcaacatgccttcatgctaaaaacactcaagaaactaggtact
gatggaatgtatctcaaaatattaagtgctatttatgacaaacccacagccaatatactg
aatgggcaaaaacgggaagcattccctttgaaaatcggcacaaaacaaggatgccatctc
tcaccactcctgttcaacatagtattggaaattctggccaggacaatcaggaagagaaag
aaataa

>gi568815586r:11033288_11234244|GENSCAN_predicted_peptide_4|163_aa
MEYYAAIKKDEFMSFAGTWMKLETIILSKLTQEQKTKHHIITHNWELNNENTWTQGGHRE
RHTTGPFRMGYRMNADYHKLKSTLTNAFQDVLSSLSRAELLAGIIHTEIDMKPEFSFASM
QTRTCSLPVFAIFPCVTSPSFVFSDFSCLGSFITRYVDRIVNV

>gi568815586r:11033288_11234244|GENSCAN_predicted_CDS_4|492_bp
atggaatactatgcagccataaaaaaggatgagttcatgtcctttgcagggacctggatg
aagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatt
atcactcataattgggagctaaacaatgagaacacatggacacagggaggacacagggaa
cgtcacacaactgggccttttaggatgggttatcgaatgaatgcagactaccataaactt
aaatcaacactcacaaatgctttccaggatgtgctatcttcactgagcagagcagagctt
ctggctggaattattcatactgaaattgacatgaaacctgaattctcatttgctagtatg
caaacaaggacatgttcacttccagtgtttgcaatttttccttgtgtaacctctccatca
tttgtctttagcgacttcagttgcttgggaagttttataacccgatatgtagatcgtata
gtaaatgtctaa

>gi568815586r:11033288_11234244|GENSCAN_predicted_peptide_5|236_aa
MLAPEAVSLVMALNMYLQSDVEDHRARDVEVREVHAQLPGQLEEGEQGAGEPLAEDAVRV
LEVVTRAMRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLVKLISNFSKVSGY
KINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGVQLTRDVKDLFKENYKPLLNE
IKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLTMTFFTELENYFKVH

>gi568815586r:11033288_11234244|GENSCAN_predicted_CDS_5|711_bp
atgctggccccggaggccgttagcttagtcatggctctaaatatgtacctgcaatcggat
gttgaggatcaccgagcccgcgacgtagaagtacgggaagttcatgcgcagctgccaggc
cagctcgaagaaggcgagcagggtgcgggagagccccttgcagaagacgccgtacgagtg
ttggaagttgtgaccagggcaatgaggcaggagaaggaaataaagggtattcaattagga
aaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaatccc
attgtctcagcccaaaatctcgttaagctgataagcaacttcagcaaagtctcaggatac
aaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagacaaacagagagc
caaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggagtc
caacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaa
ataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaat
atcgtgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaag
ctaacaatgactttcttcacagaattggaaaactactttaaagttcactga

>gi568815586r:11033288_11234244|GENSCAN_predicted_peptide_6|277_aa
MTKIQNTDNTKRWSEQSKVPADIKIWRHRVEIQFTDSGLPDCAGIGLLDLTQSTMGMWHL
GHRGRLFPSISLFCIPKKNQELACAFTAIGLKSAIFPGIPRSFGIYLECRMLFRKQYLGG
ETLYSCSDRRLAPETQDRGLCESHEHYDCFLLPPSLQFGNFPFIHQLLSMQEENSGTRSS
IAKDTNGNSLGKENAKRVTISVCVCIIVKEKLSCYPSPHMEKLMNNNKKVAYVVVKRVGG
QFASQRQNWLNEKHIVREQGRQNPVLSLQNHRFAAFG

>gi568815586r:11033288_11234244|GENSCAN_predicted_CDS_6|834_bp
atgaccaaaatccagaacactgacaacacaaaacgctggagtgaacaaagcaaagtgcca
gcagacatcaagatctggaggcacagagtagaaatccagttcactgactctggcttgcct
gattgtgcagggattggtctattagatctgacacaaagcacaatgggaatgtggcattta
ggacacagagggcgcctgttccccagtatatccttattttgcatcccaaaaaagaatcaa
gaattagcttgtgcttttactgccataggcctgaaatcagctatttttccagggatccct
agatcctttgggatctatttagagtgcagaatgctatttcgaaaacagtatctgggaggg
gaaacactgtacagctgtagtgataggcgactggctccagagacccaggacagaggccta
tgtgagagccatgaacattatgattgctttcttcttccaccttctctacagtttgggaac
ttccctttcatccatcagctactttctatgcaagaggaaaatagtggcactagatcttcc
atagctaaagatacaaatggaaattcattaggcaaagaaaatgcaaaaagagtaacaata
tcggtctgtgtttgcataatagtgaaggagaaactctcttgttacccatcaccccacatg
gaaaaactaatgaacaacaacaaaaaagtcgcttatgtggttgttaagagagttggtggc
cagtttgccagtcagcgtcaaaattggctgaatgagaaacacattgttagagaacaaggc
aggcaaaatcctgtcctgtccttgcagaatcatagatttgcagcttttgggtag

>gi568815586r:11033288_11234244|GENSCAN_predicted_peptide_7|191_aa
MDPNKKEIRDLPEKEFKRKISIQGSYLNVVKAIYDKPTTKLILNEEKLKAFSLRTGTRQG
YPLSPLLFNIVLEVLARAIRQEKEIKGIQIGKEQHKLSLFADDMIVYLENPKDSSKKLLD
LINEFSKVSGYKINVCKPVAFLYPNSDQTENQIKNSTPFTIAADVYRNIPNQGDKRPLQG
KLQNTAERNHR

>gi568815586r:11033288_11234244|GENSCAN_predicted_CDS_7|576_bp
atggatccaaacaaaaaagaaatccgtgatttacctgaaaaagaattcaaaagaaaaatc
agcatacaaggatcgtacctcaatgtagtaaaagccatctatgacaaacccacaaccaag
ttaatactgaatgaggaaaaattgaaagcattctctctgagaactggaacaagacaagga
tacccactttcaccacttttattcaatatagtactggaagttttagccagagcaattaga
caagagaaagaaataaagggcatccagattggtaaagaacaacacaaactgtcactgttt
gctgatgatatgattgtatacctagaaaaccctaaagactcctccaaaaagctcctagat
ctcataaatgaattcagcaaagtttcaggatacaaaattaatgtgtgcaaaccagtagcc
ttcctataccccaacagcgaccaaactgagaatcaaatcaagaactcaactccttttaca
atagctgcagatgtatataggaatatacctaatcaaggagataaaagacctctacaagga
aaactacaaaacaccgctgaaagaaatcatagatga