GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:41:42

Sequence gi568815594r:46828228_47093424 : 265197 bp : 36.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   3112   3321  210  0  0  104   37   148 0.862   5.57
 1.02 PlyA +   3850   3855    6                               1.05

 2.00 Prom +   5171   5210   40                              -6.45
 2.01 Init +   7258   7295   38  0  2   81   72    85 0.744   5.73
 2.02 Term +  59687  59963  277  2  1   66   54   217 0.385  10.05
 2.03 PlyA +  63056  63061    6                               1.05

 3.00 Prom +  76094  76133   40                              -3.15
 3.01 Init +  80878  81025  148  0  1   64   80   119 0.705   9.00
 3.02 Term +  81055  81101   47  2  2   59   47    87 0.883  -1.91
 3.03 PlyA +  81548  81553    6                               1.05

 4.06 PlyA -  82968  82963    6                               1.05
 4.05 Term - 100528  99998  531  1  0   76   28   385 0.324  24.56
 4.04 Intr - 137002 136743  260  2  2   64   68   326 0.431  24.46
 4.03 Intr - 146148 146005  144  1  0  126   80    87 0.661  11.03
 4.02 Intr - 164719 164577  143  0  2  102   36   123 0.501   7.58
 4.01 Init - 165197 165112   86  2  2   87   97   187 0.746  17.84
 4.00 Prom - 169529 169490   40                              -5.75

 5.03 PlyA - 169585 169580    6                               1.05
 5.02 Term - 189964 189771  194  2  2  -56   42   402 0.949  17.80
 5.01 Init - 190678 190675    4  1  1   76   57     0 0.545  -4.09
 5.00 Prom - 192845 192806   40                              -3.25

 6.00 Prom + 195368 195407   40                              -4.65
 6.01 Init + 203706 203778   73  2  1   71   82    84 0.819   7.38
 6.02 Term + 204190 204572  383  2  2   87   55   172 0.650   7.82
 6.03 PlyA + 204913 204918    6                               1.05

 7.03 PlyA - 205270 205265    6                               1.05
 7.02 Term - 217334 217189  146  0  2   86   47   214 0.985  14.19
 7.01 Init - 217917 217875   43  0  1   83   98    35 0.579   4.63
 7.00 Prom - 222214 222175   40                              -5.85

 8.04 PlyA - 223214 223209    6                               1.05
 8.03 Term - 224601 224494  108  0  0   91   49   126 0.534   6.53
 8.02 Intr - 226284 226221   64  2  1    8   98    52 0.020  -4.00
 8.01 Init - 241720 241614  107  1  2  101   68    48 0.207   3.84
 8.00 Prom - 246522 246483   40                              -4.65

 9.04 PlyA - 246976 246971    6                               1.05
 9.03 Term - 251211 250712  500  1  2   37   46   260 0.878  10.40
 9.02 Intr - 256573 256429  145  1  1   57   82   131 0.874   8.33
 9.01 Init - 258884 258489  396  2  0   49   84   172 0.876   9.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:46828228_47093424|GENSCAN_predicted_peptide_1|69_aa
MGSCAARASSTSATPGSTAPCPIDHPGAEECGRMARDWQAAPPVAPVRDPLGEASWAPES
SGDLENLYV

>gi568815594r:46828228_47093424|GENSCAN_predicted_CDS_1|210_bp
atgggctcctgtgcggcccgagcctcctcaacgagtgccacccccggctccacggcaccc
tgtcccatcgaccacccaggggctgaggagtgcgggcgcatggcacgggactggcaggca
gctccacctgtggccccagtgcgggatccactgggtgaagccagctgggctcctgagtct
agtggggacttggagaacctttatgtctag

>gi568815594r:46828228_47093424|GENSCAN_predicted_peptide_2|104_aa
MVEEESDGYILGQHGSLLFGAINQARTSRLPTPTEGIDTQMKDLLAVLTPLLMTQTSGKQ
HFTVMITTSLISNNSHGVYCALGAQQEKQSGVAFKVPQELSALL

>gi568815594r:46828228_47093424|GENSCAN_predicted_CDS_2|315_bp
atggtggaagaagagtctgacggctacattttgggacaacatggttcactcctatttgga
gccattaatcaagccagaaccagtaggctgccaacccctactgaaggtatagatacccaa
atgaaagacctgcttgctgtgctgacaccactcttaatgactcaaacatctggaaaacaa
catttcacagtgatgatcacaacttcactgataagcaataactcgcatggtgtgtactgt
gcattaggagctcaacaggagaagcaaagcggtgtcgctttcaaggtgccacaagaactc
agtgctctcctttga

>gi568815594r:46828228_47093424|GENSCAN_predicted_peptide_3|64_aa
MSYNCQLTDNEPQNETNLPRTSQVTGKKRRRRGKFRTFPFYSLEGSGKTGERKRRSHEGL
RVPN

>gi568815594r:46828228_47093424|GENSCAN_predicted_CDS_3|195_bp
atgtcttataactgtcagcttactgacaacgaaccccagaatgagacaaacttaccaagg
acgtcacaggtaacaggcaaaaaaagacggcgcagaggcaaattccgaacctttccgttt
tacagcctggaggggtcgggtaaaacaggtgaaaggaagaggcggtcacatgaaggactg
cgcgttccaaactga

>gi568815594r:46828228_47093424|GENSCAN_predicted_peptide_4|387_aa
MVSAKKVPAIALSAGVSFALLRFLCLAVCLNESPGQNQKEEKLCTENFTRILDSLLDGYD
NRLRPGFGGMNDFKRANAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETI
KSITGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQ
MEKAKRKTSKPPQEVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVG
NHSSKSSTVVQESSKGTPRSYLASSPNPFSRANAAETISAARALPSASPTSIRTGYMPRK
ASVGSASTRHVFGSRLQRIKTTVNTIGATGKLSATPPPSAPPPSGSGTSKIDKYARILFP
VTFGAFNMVYWVVYLSKDTMEKSESLM

>gi568815594r:46828228_47093424|GENSCAN_predicted_CDS_4|1164_bp
atggtttctgccaagaaggtacccgcgatcgctctgtccgccggggtcagtttcgccctc
ctgcgcttcctgtgcctggcggtttgtttaaacgaatccccaggacagaaccaaaaggag
gagaaattgtgcacagaaaatttcacccgcatcctggacagtttgctcgatggttatgac
aacaggctgcgtcctggatttgggggtatgaacgatttcaaacgcgcaaatgcctatcca
aagagtgagatgatctatacctggacaaaaggtcctgagaaatcagttgaagttccgaag
gagtcttccagcttagttcaatatgatttgattgggcaaaccgtatcaagtgaaaccatc
aaatcaattacgggaataacaactgtcctcaccatgaccacactaagcatcagtgcacga
cattctttgcccaaagtgtcctatgctaccgccatggactggttcatagctgtctgcttt
gcttttgtattttcggcccttatcgagtttgctgctgtcaactatttcaccaatattcaa
atggaaaaagccaaaaggaagacatcaaagccccctcaggaagttcccgctgctccagtg
cagagagagaagcatcctgaagcccctctgcagaatacaaatgccaatttgaacatgaga
aaaagaacaaatgctttggttcactctgaatctgatgttggcaacagaactgaggtggga
aaccattcaagcaaatcttccacagttgttcaagaatcttctaaaggcacacctcggtct
tacttagcttccagtccaaacccattcagccgtgcaaatgcagctgaaaccatatctgca
gcaagagcacttccatctgcttctcctacttctatccgaactggatatatgcctcgaaag
gcttcagttggatctgcttctactcgtcacgtgtttggatcaagactgcagaggataaag
accacagttaataccataggggctactgggaagttgtcagctactcctcctccatcggct
ccaccaccttctggatctggcacaagtaaaatagacaaatatgcccgtattctctttcca
gtcacatttggggcatttaacatggtttattgggttgtttatttatctaaggacactatg
gagaaatcagaaagtctaatgtaa

>gi568815594r:46828228_47093424|GENSCAN_predicted_peptide_5|65_aa
MERRRREEEKGGGGGKRKKKEEEDEEEKKRRQRRKREKKKEEEEEEEEEEDDDKEEERRR
KENLF

>gi568815594r:46828228_47093424|GENSCAN_predicted_CDS_5|198_bp
atggaaagaagaagaagagaagaagaaaaaggaggaggaggaggaaaaaggaagaagaaa
gaggaggaggatgaggaggagaagaagaggaggcagaggaggaagagggagaagaagaag
gaggaggaggaagaagaggaggaggaggaagatgacgacaaagaagaagaaagaagaaga
aaagaaaacttattttaa

>gi568815594r:46828228_47093424|GENSCAN_predicted_peptide_6|151_aa
MSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMVSGLPRGPAVRLT
QMGNGQVPLPSAFHWRSPRPWPLRSHSAPAPRSGTHTRSPLVCNFDTHGLLRCSRGNVLG
TILGRTSDCCAVDLLGRSLSVTLAGFPCVFG

>gi568815594r:46828228_47093424|GENSCAN_predicted_CDS_6|456_bp
atgtcatacgtgaaagagacagtggacagattgctcaaaggatatgacattcgcttgcgg
ccggacttcggagggccccccgtcgacgttgggatgcggatcgatgtcgccagcatagac
atggtctccgaagtgaatatggtgagtggcctcccgaggggcccggcggttcggcttacg
cagatgggaaatggacaggtccctttgccctctgcgtttcattggcggtcacctcgcccc
tggcccctgaggtcccactccgcacccgctccccgctccggcacacacacccggtcgccc
ctggtttgtaatttcgacacacacgggctactgcggtgttccaggggaaacgtgctcggc
actattttgggaaggacgagtgactgttgcgccgtggatctgctggggcggagtctgagc
gttactttagctgggtttccctgcgtgtttggatga

>gi568815594r:46828228_47093424|GENSCAN_predicted_peptide_7|62_aa
MAEGTSSQSGRREKELRDKCLLFISFPVCDTLLYQLKWTDDDDDDDDDDDDDDDKGEYYA
LK

>gi568815594r:46828228_47093424|GENSCAN_predicted_CDS_7|189_bp
atggcagagggcacctcttcacagagtggccggagagagaaggaactgagagataaatgt
ctcttgtttataagctttccagtctgtgatactctgttatatcagctgaaatggactgat
gatgatgatgatgatgatgatgatgatgatgatgatgatgataaaggagaatactatgct
ttaaaatga

>gi568815594r:46828228_47093424|GENSCAN_predicted_peptide_8|92_aa
MGVFIDPDMRCSGGVPETEANFSGLERKCMERNWRLQALPIDLHRSPSVQHLLLFMKFLD
PLDASEADPQSDGYIDRKMHNATVGEENERTE

>gi568815594r:46828228_47093424|GENSCAN_predicted_CDS_8|279_bp
atgggggtctttattgatcctgacatgaggtgttctggtggagtaccggaaacggaggct
aatttcagtgggcttgaaaggaaatgcatggaaagaaattggagattgcaggcattaccc
attgatcttcatcgcagtccttcagtccaacacctgctgctattcatgaagtttttagat
ccattggatgcttcagaagctgatccgcaaagcgatggatacattgacaggaagatgcat
aatgctacagtcggggaggaaaatgagagaactgaatag

>gi568815594r:46828228_47093424|GENSCAN_predicted_peptide_9|346_aa
MQAEIEGTLEIHEAFCETLVIPRWSPSGKMWHEMGKSSVSPLHHGTQHGSPHCEDKREYS
NIVTLCSRIRRMSVTTPMEVSEAVLRYHAPAALSHCTASSKRAVLEEMRALCEKSSETCF
WAPSHSLTQVERGPVPGSDEEHYGYLGYPVYDLQITCKSYKDFVYDLQIQPERWEAQNQV
EIQTTIREYYKHLYANKLENLVEMEKFLDTYTLPRLNQEEIESLNRPITGSEIEAIINSL
PTKKSPGPDGFTSEFYQRYKKELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRNTT
KKENFRPISLMNIDTRILKKILANRIQQHIKKLIHHDQVGFIPGMQ

>gi568815594r:46828228_47093424|GENSCAN_predicted_CDS_9|1041_bp
atgcaggcagagattgaagggactttggaaatccacgaagcattttgtgagacgttggtt
atacccaggtggagcccaagtggaaaaatgtggcatgaaatgggaaaaagcagtgtttcc
ccacttcaccatggaacacagcatggttctccacactgtgaggataaaagggaatacagt
aacattgtgacactttgcagcagaattaggagaatgagtgtgaccactcccatggaggta
tcagaagcagtactgaggtaccacgctccagcagcccttagccactgcacagcaagcagt
aagagggctgtcttggaagaaatgagagctctatgtgagaaatcaagtgagacatgcttt
tgggctccaagccattctctgacacaggtggagaggggtcctgttcctggctctgatgag
gaacactatgggtacctgggctaccctgtttatgacttacaaataacttgtaagtcttac
aaagactttgtttatgacttacaaatacaacctgagagatgggaagctcagaatcaggta
gaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaat
ctagtagaaatggagaaattccttgacacatacaccctcccaagattaaaccaggaagaa
attgaatctctgaatagaccaataacaggctctgaaattgaggcaataattaatagctta
ccaaccaaaaaaagtccaggaccagatggattcacatccgaattctaccagaggtacaag
aaggagctggtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctc
cctaactcattttatgaggccagcatcatcctgataccaaagcctggcagaaacacaaca
aaaaaagagaattttagaccaatatccctgatgaacatcgacacaagaatcctcaagaaa
atactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggc
ttcatccctgggatgcaatga