GENSCAN 1.0	Date run:  8-Nov-116	Time: 01:01:00

Sequence gi568815586r:10961368_11162294 : 200927 bp : 35.92% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    792    787    6                               1.05
 1.03 Term -  13077  12911  167  1  2   94   38    95 0.786   2.20
 1.02 Intr -  13425  13381   45  1  0   91   94    39 0.672   2.26
 1.01 Init -  21746  21605  142  2  1   67   64    71 0.562   2.95
 1.00 Prom -  50975  50936   40                              -2.85

 2.00 Prom +  55633  55672   40                              -3.35
 2.01 Init +  56416  56442   27  0  0  107   94     6 0.665   2.33
 2.02 Intr +  65326  65424   99  0  0   53   40    92 0.016   0.29
 2.03 Intr +  87530  87742  213  1  0   97   36   127 0.223   6.39
 2.04 Intr + 102254 102367  114  1  0   80   76    42 0.057   1.92
 2.05 Intr + 110671 110743   73  0  1   51   99     4 0.008  -4.14
 2.06 Intr + 110796 111083  288  1  0   96   61    96 0.099   3.99
 2.07 Term + 128046 128230  185  1  2   77   36   127 0.545   3.12
 2.08 PlyA + 129386 129391    6                               1.05

 3.00 Prom + 130628 130667   40                              -5.35
 3.01 Init + 130861 131083  223  0  1   55   96   124 0.239   8.67
 3.02 Term + 143994 144196  203  1  2   45   44   128 0.270   0.67
 3.03 PlyA + 146010 146015    6                               1.05

 4.00 Prom + 146110 146149   40                              -8.05
 4.01 Sngl + 150253 151458 1206  0  0   62   43   428 0.992  31.27
 4.02 PlyA + 151695 151700    6                               1.05

 5.00 Prom + 152813 152852   40                              -3.45
 5.01 Init + 152940 153143  204  2  0   66   72    99 0.530   5.00
 5.02 Intr + 168207 168305   99  2  0   57   40    98 0.200   1.29
 5.03 Term + 173146 173334  189  0  0  112   38    68 0.361   0.67
 5.04 PlyA + 173605 173610    6                               1.05

 6.02 PlyA - 173692 173687    6                               1.05
 6.01 Term - 186952 186420  533  2  2   67   40   231 0.080   9.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 116516 116614   99  1  0   83   50    98 0.839   2.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10961368_11162294|GENSCAN_predicted_peptide_1|117_aa
MHACSNFEFCYIIWHNGQATWARLYICYRARFCFGFDLRQAALANSFTWSRTIAAELVWL
FGGWESAMLEGLLCSWIAGYDTLKDGASLSTLLGSGIVAHPCSHMPAASVVWQSTHS

>gi568815586r:10961368_11162294|GENSCAN_predicted_CDS_1|354_bp
atgcatgcctgtagcaactttgaattctgttacatcatctggcacaatggccaagcaact
tgggccagactctatatctgctatagagcccgtttttgtttcgggtttgacttgagacaa
gcagcccttgcaaactcctttacctggtcaagaaccattgctgctgaactagtgtggttg
tttggaggttgggaatctgctatgctggaagggctattgtgttcctggattgctggttac
gatactctgaaggatggtgccagcctaagcactttgttgggcagtggcattgtggctcat
ccttgttcacacatgccagcagcatcagtagtgtggcagagtacacactcgtag

>gi568815586r:10961368_11162294|GENSCAN_predicted_peptide_2|332_aa
MPSRNILFKTGYRMNADYQKLKSTLTNAFQDVLSSLSRAELLVEKNKVGEIGSLEQMKYA
EASNTQMLKCLVIAETLEPKILTSNLCEAKLNTVAYQCNNMTQSKPTLDTTRAKNITDKS
TLLNQECGKYVQPCCVRNSGAKSKNRWEIAKQLTRILFSGSREYPASSFCVTGTTVFVET
SSHHVAQGGLELLASIDIPNCAYQSSGIASKSHHTKPALGVFEGQMLPRFLTHVHPKVDL
ISLLLLPLPEHVIEMDKHGSWQDSHLLPDLQTLLEKVLEAKYTHLMTVMLSLSPHCEVAA
SRAIPDITTHCFTFLPVSISTRPCHFCLEFDF

>gi568815586r:10961368_11162294|GENSCAN_predicted_CDS_2|999_bp
atgccgagcagaaacatcctgtttaagacgggttatagaatgaatgcagactaccagaaa
cttaaatcaacactcacaaatgctttccaggatgtgctgtcttcactaagcagagcagag
cttctggtggagaaaaataaggttggagaaattggcagtcttgagcaaatgaaatatgct
gaggctagtaacacccagatgctgaaatgcttggttattgctgagacattagaaccaaaa
attcttacttctaatctatgtgaagccaaattaaacacagttgcataccaatgtaataat
atgacccagagtaaaccaactctggacaccaccagagcaaaaaacataactgataaatca
actctgctaaaccaagagtgtgggaaatatgtacaaccttgttgtgtcaggaattcagga
gccaaaagcaaaaacagatgggaaattgcaaagcaactgactcgcatattgttttcaggt
tcaagggagtatcctgcctcatccttctgtgtaactgggactacagtttttgtagagaca
agctctcaccatgtagcccagggtggtctggaactcctggcctcaatagatattcccaac
tgtgcctaccaaagttccgggattgcaagcaagagccatcataccaagcctgcactggga
gtttttgaaggtcagatgctacctagatttttgactcatgtacatcccaaggtggatcta
atcagtttgctgttattacctcttcctgaacatgtaattgaaatggacaaacatggcagc
tggcaggactctcaccttcttcctgacctgcagacccttctggaaaaagtgctggaagcc
aagtacacgcatctgatgaccgtcatgctgtctctctcacctcactgtgaagtggctgcc
agcagagccataccagacatcaccacacattgtttcacatttcttcctgtctcaatttcc
acacgtccttgccatttttgtcttgaatttgacttctaa

>gi568815586r:10961368_11162294|GENSCAN_predicted_peptide_3|141_aa
MSEQTKKIFLNAGVVSGIGSCRWVRGLADFKREPLTFTVSVAALKDGVDPKSEQQQGLLR
REKGQSFHRVKGNPGLDLNIYVYLIPEFAGMSLFLFKFCDQCQTGKHLNMPVDEINAVFM
ENMMISKTAQINSYSNTTSLL

>gi568815586r:10961368_11162294|GENSCAN_predicted_CDS_3|426_bp
atgtctgaacagacaaaaaaaatttttttaaatgctggtgttgtgtccggaattggttcc
tgcaggtgggttcgtggtctcgctgacttcaaaagggagccactgaccttcacggtgagt
gttgctgctcttaaagatggtgtggacccaaagagtgagcaacagcaaggtttattgaga
agagagaaaggacaaagcttccacagagtgaaaggcaacccaggtcttgaccttaacatc
tatgtgtacctgattcctgaatttgcaggaatgtccttgttcctttttaaattctgtgac
caatgtcaaacaggaaagcatctcaatatgccagtggatgaaatcaatgctgtctttatg
gaaaacatgatgatttccaaaacagctcaaattaactcctattcaaacacaacgtccttg
ctgtaa

>gi568815586r:10961368_11162294|GENSCAN_predicted_peptide_4|401_aa
MYQNLWDTAKAVFRGKFIALNAHRRKWERSKVDTLASQLKELEKQEQTNLKASRRQEITK
VRAQLKEIETPKTLQKINESRSWFFEKFNKIERQLARLVKKKRENNPIDTIKNNKGDITT
DFREIQTIIREYYKHLYANTLENLEEMDKILDTYNIPSLNQEEVKSLNRPITSSETETVI
NSLATKKSPGTDIFTTKFYQRYKEEMVPFFLKLFKTLEKEGLLLNSFYEASIILIPKPDR
DTAKRENFRPISLMNIDAKILNKILASQIQQHIKRLIHQDQVVFNPGMQGWFNICKSINI
IHHINRTNDKNHMIISTDAEKAFDKIQHAFMLKTLKKLGTDGMYLKILSAIYDKPTANIL
NGQKREAFPLKIGTKQGCHLSPLLFNIVLEILARTIRKRKK

>gi568815586r:10961368_11162294|GENSCAN_predicted_CDS_4|1206_bp
atgtaccagaatctctgggacacagctaaagcagtgtttagagggaaatttatagcacta
aatgcccacaggagaaagtgggaaagatctaaagttgacaccctagcatcacaattaaaa
gaactggagaagcaagagcaaacaaatttaaaagctagcagaagacaagagataactaag
gtcagagcacaactgaaggagatagaaacacctaaaacccttcagaaaatcaatgaatcc
aggagctggttttttgaaaagttcaacaaaatagaaagacagctagccagactagtaaag
aagaaaagagagaataatccaatagacacaataaaaaataataaaggagatattaccact
gacttcagagaaatacaaactatcatcagagaatactataaacacctctatgcaaatacg
ctagaaaatttagaagaaatggataaaatactggacacatacaacatcccaagtctaaac
caggaagaagtcaaatccctgaatagaccaataacaagttctgaaactgagacagtaatt
aatagcctagcaaccaaaaaaagtccaggaacagacatattcacaaccaaattctaccag
aggtacaaagaggagatggtaccattctttctgaaactattcaaaacactggaaaaagag
ggactactccttaactcattttatgaggccagcatcatcctgattccaaaacctgataga
gacacagcaaaaagagaaaattttaggccaatatccttgatgaacatcgatgcgaaaatc
ctcaataaaatactggcaagccaaatccagcagcatataaaaaggcttatccaccaagat
caagtcgtcttcaaccctgggatgcaaggctggttcaacatatgcaaatcaataaacata
atccatcacataaacagaaccaatgacaaaaaccacatgattatctcaacagatgcagaa
aaggcctttgataaaattcaacatgccttcatgctaaaaacactcaagaaactaggtact
gatggaatgtatctcaaaatattaagtgctatttatgacaaacccacagccaatatactg
aatgggcaaaaacgggaagcattccctttgaaaatcggcacaaaacaaggatgccatctc
tcaccactcctgttcaacatagtattggaaattctggccaggacaatcaggaagagaaag
aaataa

>gi568815586r:10961368_11162294|GENSCAN_predicted_peptide_5|163_aa
MEYYAAIKKDEFMSFAGTWMKLETIILSKLTQEQKTKHHIITHNWELNNENTWTQGGHRE
RHTTGPFRMGYRMNADYHKLKSTLTNAFQDVLSSLSRAELLAGIIHTEIDMKPEFSFASM
QTRTCSLPVFAIFPCVTSPSFVFSDFSCLGSFITRYVDRIVNV

>gi568815586r:10961368_11162294|GENSCAN_predicted_CDS_5|492_bp
atggaatactatgcagccataaaaaaggatgagttcatgtcctttgcagggacctggatg
aagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatt
atcactcataattgggagctaaacaatgagaacacatggacacagggaggacacagggaa
cgtcacacaactgggccttttaggatgggttatcgaatgaatgcagactaccataaactt
aaatcaacactcacaaatgctttccaggatgtgctatcttcactgagcagagcagagctt
ctggctggaattattcatactgaaattgacatgaaacctgaattctcatttgctagtatg
caaacaaggacatgttcacttccagtgtttgcaatttttccttgtgtaacctctccatca
tttgtctttagcgacttcagttgcttgggaagttttataacccgatatgtagatcgtata
gtaaatgtctaa

>gi568815586r:10961368_11162294|GENSCAN_predicted_peptide_6|177_aa
XLEVVTRAMRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLVKLISNFSKVSG
YKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGVQLTRDVKDLFKENYKPLLN
EIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLTMTFFTELENYFKVH

>gi568815586r:10961368_11162294|GENSCAN_predicted_CDS_6|534_bp
ntgttggaagttgtgaccagggcaatgaggcaggagaaggaaataaagggtattcaatta
ggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaat
cccattgtctcagcccaaaatctcgttaagctgataagcaacttcagcaaagtctcagga
tacaaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagacaaacagag
agccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctagga
gtccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaat
gaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatc
aatatcgtgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccatc
aagctaacaatgactttcttcacagaattggaaaactactttaaagttcactga