Result of FASTA (omim) for
pF1KE5152
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5152, 87 aa
1>>>pF1KE5152 87 - 87 aa - 87 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4329+/-0.000244; mu= 13.3978+/- 0.015
mean_var=53.5114+/-10.686, 0's: 0 Z-trim(122.0): 35 B-trim: 1069 in 1/56
Lambda= 0.175328
statistics sampled from 39387 (39422) to 39387 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.829), E-opt: 0.2 (0.462), width: 16
Scan time: 3.860
The best scores are: opt bits E(85289)
NP_005962 (OMIM: 604996) FXYD domain-containing io ( 87) 608 160.2 3.8e-40
XP_016882367 (OMIM: 604996) PREDICTED: FXYD domain ( 87) 608 160.2 3.8e-40
XP_016882366 (OMIM: 604996) PREDICTED: FXYD domain ( 87) 608 160.2 3.8e-40
NP_001129483 (OMIM: 604996) FXYD domain-containing ( 87) 608 160.2 3.8e-40
NP_001129479 (OMIM: 604996) FXYD domain-containing ( 144) 608 160.4 5.6e-40
NP_001129480 (OMIM: 604996) FXYD domain-containing ( 96) 412 110.7 3.4e-25
NP_001129484 (OMIM: 604996) FXYD domain-containing ( 113) 412 110.7 3.9e-25
NP_068710 (OMIM: 604996) FXYD domain-containing io ( 113) 412 110.7 3.9e-25
XP_005259053 (OMIM: 604996) PREDICTED: FXYD domain ( 113) 412 110.7 3.9e-25
XP_011525334 (OMIM: 604996) PREDICTED: FXYD domain ( 170) 412 110.9 5.3e-25
NP_775183 (OMIM: 616926) FXYD domain-containing io ( 89) 302 82.8 7.7e-17
NP_001171892 (OMIM: 616926) FXYD domain-containing ( 89) 302 82.8 7.7e-17
NP_001129481 (OMIM: 604996) FXYD domain-containing ( 61) 211 59.7 4.9e-10
NP_001129482 (OMIM: 604996) FXYD domain-containing ( 61) 211 59.7 4.9e-10
NP_001265647 (OMIM: 602359) phospholemman precurso ( 92) 211 59.8 6.7e-10
XP_016882363 (OMIM: 602359) PREDICTED: phospholemm ( 92) 211 59.8 6.7e-10
NP_001265646 (OMIM: 602359) phospholemman precurso ( 92) 211 59.8 6.7e-10
NP_005022 (OMIM: 602359) phospholemman precursor [ ( 92) 211 59.8 6.7e-10
NP_068702 (OMIM: 602359) phospholemman precursor [ ( 92) 211 59.8 6.7e-10
XP_016882364 (OMIM: 602359) PREDICTED: phospholemm ( 110) 211 59.9 7.7e-10
XP_016882365 (OMIM: 602359) PREDICTED: phospholemm ( 110) 211 59.9 7.7e-10
NP_001158304 (OMIM: 606683) FXYD domain-containing ( 95) 193 55.3 1.6e-08
NP_001158308 (OMIM: 606683) FXYD domain-containing ( 95) 193 55.3 1.6e-08
NP_001158303 (OMIM: 606683) FXYD domain-containing ( 95) 193 55.3 1.6e-08
NP_001158309 (OMIM: 606683) FXYD domain-containing ( 95) 193 55.3 1.6e-08
NP_071286 (OMIM: 606683) FXYD domain-containing io ( 95) 193 55.3 1.6e-08
NP_071289 (OMIM: 606684) FXYD domain-containing io ( 80) 135 40.6 0.00037
NP_067614 (OMIM: 154020,601814) sodium/potassium-t ( 64) 132 39.7 0.00052
NP_001671 (OMIM: 154020,601814) sodium/potassium-t ( 66) 129 39.0 0.00091
NP_001307842 (OMIM: 606669) FXYD domain-containing ( 147) 125 38.2 0.0034
NP_054883 (OMIM: 606669) FXYD domain-containing io ( 178) 125 38.3 0.0039
NP_659003 (OMIM: 606669) FXYD domain-containing io ( 178) 125 38.3 0.0039
NP_001158077 (OMIM: 606669) FXYD domain-containing ( 178) 125 38.3 0.0039
>>NP_005962 (OMIM: 604996) FXYD domain-containing ion tr (87 aa)
initn: 608 init1: 608 opt: 608 Z-score: 841.8 bits: 160.2 E(85289): 3.8e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 87 aa overlap (1-87:1-87)
10 20 30 40 50 60
pF1KE5 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK
10 20 30 40 50 60
70 80
pF1KE5 CKCKFGQKSGHHPGETPPLITPGSAQS
:::::::::::::::::::::::::::
NP_005 CKCKFGQKSGHHPGETPPLITPGSAQS
70 80
>>XP_016882367 (OMIM: 604996) PREDICTED: FXYD domain-con (87 aa)
initn: 608 init1: 608 opt: 608 Z-score: 841.8 bits: 160.2 E(85289): 3.8e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 87 aa overlap (1-87:1-87)
10 20 30 40 50 60
pF1KE5 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK
10 20 30 40 50 60
70 80
pF1KE5 CKCKFGQKSGHHPGETPPLITPGSAQS
:::::::::::::::::::::::::::
XP_016 CKCKFGQKSGHHPGETPPLITPGSAQS
70 80
>>XP_016882366 (OMIM: 604996) PREDICTED: FXYD domain-con (87 aa)
initn: 608 init1: 608 opt: 608 Z-score: 841.8 bits: 160.2 E(85289): 3.8e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 87 aa overlap (1-87:1-87)
10 20 30 40 50 60
pF1KE5 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK
10 20 30 40 50 60
70 80
pF1KE5 CKCKFGQKSGHHPGETPPLITPGSAQS
:::::::::::::::::::::::::::
XP_016 CKCKFGQKSGHHPGETPPLITPGSAQS
70 80
>>NP_001129483 (OMIM: 604996) FXYD domain-containing ion (87 aa)
initn: 608 init1: 608 opt: 608 Z-score: 841.8 bits: 160.2 E(85289): 3.8e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 87 aa overlap (1-87:1-87)
10 20 30 40 50 60
pF1KE5 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAK
10 20 30 40 50 60
70 80
pF1KE5 CKCKFGQKSGHHPGETPPLITPGSAQS
:::::::::::::::::::::::::::
NP_001 CKCKFGQKSGHHPGETPPLITPGSAQS
70 80
>>NP_001129479 (OMIM: 604996) FXYD domain-containing ion (144 aa)
initn: 608 init1: 608 opt: 608 Z-score: 838.7 bits: 160.4 E(85289): 5.6e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 87 aa overlap (1-87:58-144)
10 20 30
pF1KE5 MQKVTLGLLVFLAGFPVLDANDLEDKNSPF
::::::::::::::::::::::::::::::
NP_001 FTQSPLHGAAAAYLSAQRDASLPVPGQRSDMQKVTLGLLVFLAGFPVLDANDLEDKNSPF
30 40 50 60 70 80
40 50 60 70 80
pF1KE5 YYDWHSLQVGGLICAGVLCAMGIIIVMSAKCKCKFGQKSGHHPGETPPLITPGSAQS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YYDWHSLQVGGLICAGVLCAMGIIIVMSAKCKCKFGQKSGHHPGETPPLITPGSAQS
90 100 110 120 130 140
>>NP_001129480 (OMIM: 604996) FXYD domain-containing ion (96 aa)
initn: 470 init1: 393 opt: 412 Z-score: 573.3 bits: 110.7 E(85289): 3.4e-25
Smith-Waterman score: 422; 72.9% identity (72.9% similar) in 96 aa overlap (1-70:1-96)
10 20 30 40 50
pF1KE5 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW
10 20 30 40 50 60
60 70 80
pF1KE5 ------------------------AKCKCKFGQKSGHHPGETPPLITPGSAQS
::::::::::::
NP_001 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSG
70 80 90
>>NP_001129484 (OMIM: 604996) FXYD domain-containing ion (113 aa)
initn: 594 init1: 393 opt: 412 Z-score: 572.3 bits: 110.7 E(85289): 3.9e-25
Smith-Waterman score: 546; 77.0% identity (77.0% similar) in 113 aa overlap (1-87:1-113)
10 20 30 40 50
pF1KE5 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW
10 20 30 40 50 60
60 70 80
pF1KE5 ------------------------AKCKCKFGQKSGHHPGETPPLITPGSAQS
:::::::::::::::::::::::::::::
NP_001 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS
70 80 90 100 110
>>NP_068710 (OMIM: 604996) FXYD domain-containing ion tr (113 aa)
initn: 594 init1: 393 opt: 412 Z-score: 572.3 bits: 110.7 E(85289): 3.9e-25
Smith-Waterman score: 546; 77.0% identity (77.0% similar) in 113 aa overlap (1-87:1-113)
10 20 30 40 50
pF1KE5 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW
10 20 30 40 50 60
60 70 80
pF1KE5 ------------------------AKCKCKFGQKSGHHPGETPPLITPGSAQS
:::::::::::::::::::::::::::::
NP_068 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS
70 80 90 100 110
>>XP_005259053 (OMIM: 604996) PREDICTED: FXYD domain-con (113 aa)
initn: 594 init1: 393 opt: 412 Z-score: 572.3 bits: 110.7 E(85289): 3.9e-25
Smith-Waterman score: 546; 77.0% identity (77.0% similar) in 113 aa overlap (1-87:1-113)
10 20 30 40 50
pF1KE5 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMS--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSEW
10 20 30 40 50 60
60 70 80
pF1KE5 ------------------------AKCKCKFGQKSGHHPGETPPLITPGSAQS
:::::::::::::::::::::::::::::
XP_005 RSSGEQAGRGWGSPPLTTQLSPTGAKCKCKFGQKSGHHPGETPPLITPGSAQS
70 80 90 100 110
>>XP_011525334 (OMIM: 604996) PREDICTED: FXYD domain-con (170 aa)
initn: 594 init1: 393 opt: 412 Z-score: 569.8 bits: 110.9 E(85289): 5.3e-25
Smith-Waterman score: 546; 77.0% identity (77.0% similar) in 113 aa overlap (1-87:58-170)
10 20 30
pF1KE5 MQKVTLGLLVFLAGFPVLDANDLEDKNSPF
::::::::::::::::::::::::::::::
XP_011 FTQSPLHGAAAAYLSAQRDASLPVPGQRSDMQKVTLGLLVFLAGFPVLDANDLEDKNSPF
30 40 50 60 70 80
40 50 60
pF1KE5 YYDWHSLQVGGLICAGVLCAMGIIIVMS--------------------------AKCKCK
:::::::::::::::::::::::::::: ::::::
XP_011 YYDWHSLQVGGLICAGVLCAMGIIIVMSEWRSSGEQAGRGWGSPPLTTQLSPTGAKCKCK
90 100 110 120 130 140
70 80
pF1KE5 FGQKSGHHPGETPPLITPGSAQS
:::::::::::::::::::::::
XP_011 FGQKSGHHPGETPPLITPGSAQS
150 160 170
87 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 22:00:57 2016 done: Mon Nov 7 22:00:58 2016
Total Scan time: 3.860 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]