GENSCAN 1.0	Date run:  7-Nov-116	Time: 04:46:11

Sequence gi568815588f:96204498_96438221 : 233724 bp : 43.88% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 Intr -    119     35   85  2  1   65   63    92 0.123   3.79
 1.10 Intr -   3402   3375   28  2  1  113   98    31 0.051   4.72
 1.09 Intr -   5410   5341   70  2  1   50  114    11 0.093  -1.86
 1.08 Intr -  12237  12156   82  0  1   53  116    92 0.184   7.71
 1.07 Intr -  19492  19329  164  2  2   74   88    20 0.119   0.29
 1.06 Intr -  23069  22913  157  2  1   88   66   305 0.540  27.88
 1.05 Intr -  26337  26297   41  1  2  102   78    74 0.893   5.74
 1.04 Intr -  38287  38238   50  0  2  100  110    49 0.953   6.62
 1.03 Intr -  42552  42487   66  2  0   98  106    32 0.933   4.02
 1.02 Intr -  43383  43280  104  0  2   23   82   116 0.875   3.47
 1.01 Init -  45278  45171  108  2  0   80   72    50 0.806   3.12
 1.00 Prom -  51751  51712   40                              -5.56

 2.00 Prom +  58128  58167   40                              -5.66
 2.01 Init +  62778  62887  110  2  2   51  113    59 0.582   4.39
 2.02 Intr +  68280  68444  165  0  0   85   25   353 0.445  27.78
 2.03 Intr +  71748  71784   37  0  1   84   70    23 0.224  -1.64
 2.04 Intr +  72956  73038   83  1  2   70   91    65 0.111   3.44
 2.05 Intr +  99928 100203  276  1  0   18   91   185 0.025   8.43
 2.06 Intr + 113855 114029  175  2  1   73   81   173 0.998  15.04
 2.07 Intr + 114765 114893  129  2  0   42   49   111 0.918   3.49
 2.08 Intr + 116121 116291  171  2  0   92   94    61 0.899   7.24
 2.09 Intr + 118160 118231   72  1  0   53  106   100 0.995   7.90
 2.10 Intr + 119769 119892  124  2  1   73   99    42 0.991   3.96
 2.11 Intr + 122971 123103  133  2  1   58   84   111 0.925   7.40
 2.12 Intr + 124270 124333   64  1  1   44  100    59 0.734   1.42
 2.13 Intr + 127854 128099  246  2  0  118  114    92 0.921  12.46
 2.14 Intr + 131394 131477   84  2  0   68   87   100 0.856   7.92
 2.15 Term + 138918 139061  144  2  0   41   47    83 0.057  -2.59
 2.16 PlyA + 140225 140230    6                               1.05

 3.08 PlyA - 140748 140743    6                               1.05
 3.07 Term - 141790 141761   30  1  0  130   36    -6 0.127  -3.75
 3.06 Intr - 143848 143792   57  1  0   83   94    17 0.297   0.88
 3.05 Intr - 145329 145210  120  0  0  108   45    74 0.386   5.79
 3.04 Intr - 150793 150758   36  1  0   94   98    29 0.481   2.96
 3.03 Intr - 154769 154707   63  2  0   92   65    48 0.602   1.81
 3.02 Intr - 156055 155895  161  2  2   56   50   121 0.717   4.81
 3.01 Init - 157241 157193   49  2  1   86   58    65 0.833   2.41
 3.00 Prom - 158029 157990   40                              -5.56

 4.21 PlyA - 159545 159540    6                               1.05
 4.20 Term - 163725 163591  135  0  0   94   39   258 0.982  19.52
 4.19 Intr - 165818 165568  251  0  2   91   98   534 0.999  51.86
 4.18 Intr - 169312 169099  214  1  1  128   82   263 0.974  27.99
 4.17 Intr - 172322 172195  128  0  2   90   80    84 0.998   8.20
 4.16 Intr - 174595 174470  126  2  0   37   72   187 0.972  12.65
 4.15 Intr - 180270 180090  181  0  1  102   85   304 0.975  30.94
 4.14 Intr - 181718 181558  161  0  2   62   52   139 0.999   7.41
 4.13 Intr - 182581 182456  126  2  0   96   81   187 0.993  19.45
 4.12 Intr - 184957 184927   31  1  1  134   85   -11 0.669   0.90
 4.11 Intr - 188469 188273  197  1  2   50   87    44 0.135  -0.37
 4.10 Intr - 190885 190690  196  1  1  103   55   313 0.536  28.49
 4.09 Intr - 191523 191378  146  1  2   85  105    82 0.955   9.60
 4.08 Intr - 192805 192689  117  2  0  114   76   203 0.964  22.14
 4.07 Intr - 200837 200735  103  2  1   88  106    10 0.797   2.55
 4.06 Intr - 205977 205862  116  1  2   56  100    66 0.961   4.77
 4.05 Intr - 208819 208695  125  0  2  115   93    83 0.999  11.73
 4.04 Intr - 216564 216459  106  1  1   49   58    99 0.624   2.27
 4.03 Intr - 218230 218052  179  0  2   63  110   101 0.832   9.36
 4.02 Intr - 224251 224134  118  2  1   74  106    27 0.343   2.62
 4.01 Intr - 228465 228310  156  1  0   53   65    88 0.288   2.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:96204498_96438221|GENSCAN_predicted_peptide_1|319_aa
MALAMAFLRAEAQTQPQIQGYHPLPSPKPPPLKIPQGFPIGYLVTSYVNEGVAHDQSDWL
QKVINQTLKLRQLQKMVHDIKNNEGGIMNKIKKLKVKAPPSVPRRDYASESPADEEEQWS
DDFDSDYENPDEHSDSEMYVMPAEENADDSYEPPPVEQETRPVHPALPFARGEYIDNRSS
QRHSPPFSKTLPSKPSWPSEKARLTSTLPALTALQKPQVPPKPKGLLEDEADYVVPVEDN
DENYIHPTESSSPPPEKGRNSGAWETKSPPPAAPSPLPRAGKKPTTPLKTKNLYLLNATE
GQVTDKKLCSHQCFLLPRX

>gi568815588f:96204498_96438221|GENSCAN_predicted_CDS_1|957_bp
atggctctggctatggcttttctcagagcagaggcccagacccagcctcagattcagggc
taccaccccctgccatcgcccaaacccccaccactgaaaatccctcaggggtttcccatt
ggttacttggttacatcctatgtaaatgaaggagtggcccacgaccagtctgattggttg
cagaaggtgatcaatcagacgctgaagttaaggcagcttcaaaagatggtccatgatatt
aaaaacaatgaaggtggaataatgaataaaatcaaaaagctaaaagtcaaagcacctcca
agtgttcctcgaagggactacgcttcagagagccctgctgacgaagaggagcagtggtcc
gatgactttgacagcgactatgaaaatccagatgagcactcggactcagagatgtacgtg
atgcccgccgaggagaacgctgatgacagctacgagccgcctccagtagagcaggaaacc
aggccggttcacccagccctgcccttcgccagaggcgagtatatagacaatcgatcaagc
cagaggcattccccacccttcagcaagacacttcccagtaagcccagctggccttcagag
aaagcaaggctcacctccaccctgccggccctgactgctttgcagaaacctcaagtccca
cccaaacccaaaggcctccttgaggatgaggctgattatgtggtccccgtggaagataat
gatgaaaactatattcatcccacagaaagcagttcacctccacctgaaaaaggtcgaaac
agtggggcctgggaaaccaagtcacctccaccagctgcaccatccccgttgccacgggcc
gggaaaaaaccaacgacaccactgaagacaaaaaacctatacctgctgaacgccaccgag
ggtcaagtcacagacaagaagctgtgcagtcaccagtgtttcctcctgcccagaann

>gi568815588f:96204498_96438221|GENSCAN_predicted_peptide_2|670_aa
MLWKKRKEKPYMEEKSHKENLQGVVGEWVSAEVKRERPKIWLKTVGKEEKTEEEKEVEEE
EEEEEEEAEEEEEEEAEEEETEEEGEKEQRQWASLGKLPQEVGKSHGPAASQNHHPEVKK
QIHKALGNQESRRVAVSLPSGDTTRWASQRQQQPLPMDPPRASHLSPRKKRPRQTGALMA
SSPQDIKFQDLVVFILEKKMGTTRRAFLMELARRKGFRVENELSDSVTHIVAENNSGSDV
LEWLQAQKVQVSSQPELLDVSWLIECIRAGKPVEMTGKHQLVVRRDYSDSTNPGPPKTPP
IAVQKISQYACQRRTTLNNCNQIFTDAFDILAENCEFRENEDSCVTFMRAASVLKSLPFT
IISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAVLNDERYQSFKLFTSVFGVGLKTSE
KWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLVSCVTRAEAEAVSVLVKEAVWAFLP
DAFVTMTGGFRSPGSTEDEEQLLQKVMNLWEKKGLLLYYDLVESTFEKLRLPSRKVDALD
HFQKCFLIFKLPRQRVDSDQSSWQEGKTWKAIRVDLVLCPYERRAFALLGWTGSRQFERD
LRRYATHERKMILDNHALYDKTKLHGLVTCIFQSSLTTTPWAKRMEDENCCLHFTSTELR
LWMINNRPKG

>gi568815588f:96204498_96438221|GENSCAN_predicted_CDS_2|2013_bp
atgttgtggaagaaaaggaaagaaaagccatatatggaagagaagagccataaagaaaac
ctgcagggtgtggtaggtgagtgggtgtcagctgaggtgaagagggaaagacccaagatc
tggctgaagacagtggggaaagaggagaagacagaagaggagaaggaggtggaggaagag
gaggaggaggaggaggaagaagcggaggaggaggaggaagaagaagcggaggaggaggag
acagaggaggagggggagaaggaacagcggcagtgggccagtttaggcaaactgccacag
gaagttggcaagtcacatggcccagccgctagtcagaaccaccacccagaagtgaagaag
cagatacacaaggccttaggaaatcaggagtccaggagggtggcagtctccctcccttct
ggagacaccaccagatgggccagccagaggcagcagcagcctcttcccatggatccacca
cgagcgtcccacttgagccctcggaagaagagaccccggcagacgggtgccttgatggcc
tcctctcctcaagacatcaaatttcaagatttggtcgtcttcattttggagaagaaaatg
ggaaccacccgcagagcgttcctcatggagctggcccgcaggaaagggttcagggttgaa
aatgagctcagtgattctgtcacccacatcgtagcagagaacaactcgggttcggatgtt
ctggagtggcttcaagcacagaaagtacaagtcagctcacaaccagagctcctcgatgtc
tcctggctgatcgaatgcataagagcagggaaaccggtggaaatgacaggaaaacaccag
cttgttgtgagaagagactattcagatagcaccaacccaggccccccgaagactccacca
attgctgtacaaaagatctcccagtatgcgtgtcagagaagaaccactttaaacaactgt
aaccagatattcacggatgcctttgatatactggctgaaaactgtgagtttagagaaaat
gaagactcctgtgtgacatttatgagagcagcttctgtattgaaatctctgccattcaca
atcatcagtatgaaggacacagaaggaattccctgcctggggtccaaggtgaagggtatc
atagaggagattattgaagatggagaaagttctgaagttaaagctgtgttaaatgatgaa
cgatatcaatccttcaaactctttacttctgtatttggagtggggctgaagacttctgag
aagtggttcaggatgggtttcagaactctgagtaaagtaaggtcggacaaaagcctgaaa
tttacacgaatgcagaaagcaggatttctgtattatgaagaccttgtcagctgtgtgacc
agggcagaagcagaggccgtcagtgtgctggttaaagaggctgtctgggcatttcttccg
gatgctttcgtcaccatgacaggagggttccggagcccaggatcaacagaggatgaagag
caacttttacagaaagtgatgaacttatgggaaaagaagggattacttttatattatgac
cttgtggagtcaacatttgaaaagctcaggttgcctagcaggaaggttgatgctttggat
cattttcaaaagtgctttctgattttcaaattgcctcgtcaaagagtggacagtgaccag
tccagctggcaggaaggaaagacctggaaggccatccgtgtggatttagttctgtgcccc
tacgagcgtcgtgcctttgccctgttgggatggactggctcccggcagtttgagagagac
ctccggcgctatgccacacatgagcggaagatgattctggataaccatgctttatatgac
aagaccaagctacatggcttagtcacatgcatatttcaatccagccttacaaccacccca
tgggctaaaaggatggaggatgagaactgctgtctccactttacaagtacagaactgagg
ctctggatgatcaacaatcggcccaagggctga

>gi568815588f:96204498_96438221|GENSCAN_predicted_peptide_3|171_aa
MGFRHVGQAVLELLTSAVLALCPVYLLMHTGGFKTIHRPATPKRMSSAPDPLYPVAYLAP
TLGQPLGYSGGCRLQKPPSSQASCGFFAEMESFSLNFTLPANTDCGPSLGLAAGIPLLVA
TALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISEDHCPSLPVV

>gi568815588f:96204498_96438221|GENSCAN_predicted_CDS_3|516_bp
atggggtttcgccatgttggccaggctgttctcgaactcctgacctcagctgtcctggcc
ctctgccctgtctacctgctcatgcacaccgggggctttaaaaccatccacaggccggcc
actcccaaacggatgtcttcagccccagatcccctttatccagtcgcctacttggcaccc
acacttggacagcccctaggctactcaggtggctgcaggctgcagaagcccccaagctct
caggccagctgtggcttctttgctgagatggagagtttttcactgaacttcaccctgccg
gcgaacacagactgtgggccctctcttggattagcggcgggcataccattgctggtggcc
acagccctgctggtggctttactatttactttgattcaccgaagaagaagcagcattgag
gccatggaggaaagtgacagaccatgtgaaatttcagaaattgatgacaatcccaagata
tctgaggaccattgtccctccttgcctgttgtctag

>gi568815588f:96204498_96438221|GENSCAN_predicted_peptide_4|970_aa
XGRENTTLLHSPGTLHAAAKTFSPRVRRATTSRTERIWPGGVIPYVIGGNFTGSQRAIFK
QAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRRGGGPQAISIGKNCDKFGIVA
HELGHVVGFWHEHTRPDRDQHVTIIRENIQPGQEYNFLKMEAGEVSSLGETYDFDSIMHY
ARNTFSRGVFLDTILPRQDDNGVRPTIGQRVRLSQGDIAQARKLYKCPACGETLQDTTGN
FSAPGFPNGYPSYSHCVWRISVTPGEKIVLNFTSMDLFKSRLCWYDYVEVRDGYWRKAPL
LGRFCGDKIPEPLVSTDSRLWVEFRSSSNILGKGFFAAYEATCGGDMNKDAGQIQSPNYP
DDYRPSKECVWRITVSEGFHVGLTFQAFEIERHDSCAYDYLEVRDGPTEESALIGHFCGY
EKPEDVKSSSNRLWMKFVSDGSINKAGFAANFFKAHLLLLTLTSFHLFALHGPGVDIEPT
QIIQENLLISKILHLTTPAESFFHLIKILNLTTLAESYIKACTAPLPPGPEVDECSWPDH
GGCEHRCVNTLGSYKCACDPGYELAADKKMCEVACGGFITKLNGTITSPGWPKEYPTNKN
CVWQVVAPAQYRISLQFEVFELEGNDVCKYDFVEVRSGLSPDAKLHGRFCGSETPEVITS
QSNNMRVEFKSDNTVSKRGFRAHFFSDKDECAKDNGGCQHECVNTFGSYLCRCRNGYWLH
ENGHDCKEAGCAHKISSVEGTLASPNWPDKYPSRRECTWNISSTAGHRVKLTFNEFEIEQ
HQECAYDHLEMYDGPDSLAPILGRFCGSKKPDPTVASGSSMFLRFYSDASVQRKGFQAVH
STECGGRLKAEVQTKELYSHAQFGDNNYPSEARCDWVIVAEDGYGVELTFRTFEVEEEAD
CGYDYMEAYDGYDSSAPRLGRFCGSGPLEEIYSAGDSLMIRFRTDDTINKKGFHARYTST
KFQDALHMKK

>gi568815588f:96204498_96438221|GENSCAN_predicted_CDS_4|2913_bp
natggccgggagaataccacactcctgcacagccctgggaccttgcatgccgcagccaag
accttctctccccgggtccgaagagccacaacctcaaggacagagaggatatggcctgga
ggagtcatcccctacgtcattggagggaacttcactgggagccagagggccatttttaag
caggccatgagacactgggagaagcacacctgtgtgaccttcatagaaaggacggatgag
gaaagctttattgtattcagttacagaacctgtggctgttgctcctatgttgggcgccga
ggaggaggcccacaggccatatccattgggaagaactgtgacaagtttggcattgtggct
cacgagctgggccatgtggttgggttttggcatgaacacacccggccagacagagaccaa
catgtcaccatcatcagggaaaacatccagccaggtcaggagtataatttcttaaaaatg
gaagctggggaagtgagctctctgggagagacatacgactttgacagcatcatgcactac
gcccggaacaccttctcaagaggagttttcttagacaccatccttccccgtcaagatgac
aatggcgtcaggccaaccattggccagcgcgtgcggctcagtcagggagacatagctcaa
gcccggaagctgtacaaatgcccagcgtgtggggagaccctgcaggacacaacgggaaac
ttttctgcacctggtttcccaaatgggtacccatcttactcccactgcgtctggaggatc
tcggtcaccccaggggaaaagatcgtattaaacttcacatccatggatttgtttaaaagc
cgactgtgctggtatgattacgtggaggtccgggatggttactggagaaaagcccccctt
ttgggcaggttttgtggcgataagatcccggagcccctcgtctccacggacagccggctc
tgggtggagttccgcagcagcagcaacatcttgggcaagggcttctttgcagcgtacgaa
gctacctgcgggggagacatgaacaaagatgccggtcagattcaatctcccaactatccg
gatgactacagaccttccaaggaatgtgtctggaggattacggtttcagaggggtttcac
gtgggacttaccttccaagcttttgagattgaaaggcacgacagctgtgcatatgactac
ctggaagtccgggatggccccacggaagagagtgccctgatcggccacttttgtggctat
gagaagccggaggatgtgaaatcgagctccaacagactgtggatgaagtttgtgtccgat
ggctctatcaataaagcgggctttgcagccaattttttcaaggcacatctcctccttctg
accctaacttccttccacctctttgccttacacggacctggtgttgacattgagcccacc
cagataatccaggagaatctcctcatctccaagatccttcatttaaccacacctgcagag
tccttctttcacctaattaagatccttaatttaaccacacttgcagaatcttacattaag
gcctgcactgctccactcccacctggtccagaggtggatgagtgttcctggccagatcac
ggcgggtgcgagcatcgctgtgtgaacacgctgggcagctacaagtgtgcctgtgaccct
ggctacgagctggccgccgataagaagatgtgtgaagtggcctgtggcggtttcattacc
aagctgaatggaaccatcaccagccctgggtggccgaaggagtatcccacaaacaaaaac
tgtgtctggcaggtggtggcccccgctcagtaccggatctcccttcagtttgaagtgttt
gaactggaaggcaatgacgtctgtaagtacgactttgtagaggtgcgcagcggcctgtcc
cccgacgccaagctgcacggcaggttctgcggctctgagacgccggaggtcatcacctcg
cagagcaacaacatgcgcgtggagttcaagtccgacaacaccgtctccaagcgcggcttc
agggcccacttcttctcagataaggacgagtgtgccaaggacaacggcgggtgtcagcat
gagtgcgtcaacaccttcgggagctacctgtgcaggtgcagaaacggctactggctccac
gagaatgggcatgactgcaaagaggctggctgtgcacacaagatcagcagtgtggagggg
accctggcgagccccaactggcctgacaaataccccagccggagggagtgtacctggaac
atctcttcgactgcaggccacagagtgaaactcacctttaatgagtttgagatcgagcag
caccaggaatgtgcctatgaccacctggaaatgtatgacgggccggacagcctggccccc
attctgggccgtttctgcggcagcaagaaaccagaccccacggtggcttccggcagcagt
atgtttctcaggttttattcggatgcctcagtgcagaggaaaggcttccaggcagtgcac
agcacagagtgcgggggcaggctgaaggctgaagtgcagaccaaagagctctattcccac
gcccagtttggggacaacaactacccgagcgaggcccgctgtgactgggtgatcgtggca
gaggacggctacggcgtggagctgacattccggacctttgaggttgaggaggaggccgac
tgcggctacgactacatggaagcctacgacggctacgacagctcagcgcccaggctcggc
cgcttctgtggctctgggccattagaagaaatctactctgcaggtgattccctgatgatt
cgattccgcacagatgacaccatcaacaagaaaggctttcatgcccgatacaccagcacc
aagttccaggatgccctgcacatgaagaaatag