Result of FASTA (omim) for pF1KE5454
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5454, 353 aa
  1>>>pF1KE5454     353 - 353 aa - 353 aa
Library: /omim/omim.rfq.tfa
  64092750 residues in 91774 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1574+/-0.000366; mu= 16.8465+/- 0.023
 mean_var=71.0436+/-14.486, 0's: 0 Z-trim(113.0): 143  B-trim: 205 in 1/49
 Lambda= 0.152164
 statistics sampled from 22878 (23031) to 22878 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.251), width:  16
 Scan time:  3.670

The best scores are:                                      opt bits E(91774)
XP_016866271 (OMIM: 138244,611092) glutamate recep ( 601) 2090 468.4  2e-131
XP_016866270 (OMIM: 138244,611092) glutamate recep ( 707) 2090 468.4 2.2e-131
NP_786944 (OMIM: 138244,611092) glutamate receptor ( 869) 2090 468.5 2.6e-131
XP_024302179 (OMIM: 138244,611092) glutamate recep ( 869) 2090 468.5 2.6e-131
NP_001159719 (OMIM: 138244,611092) glutamate recep ( 892) 2090 468.5 2.7e-131
XP_024302178 (OMIM: 138244,611092) glutamate recep ( 892) 2090 468.5 2.7e-131
XP_011534079 (OMIM: 138244,611092) glutamate recep ( 892) 2090 468.5 2.7e-131
XP_005267002 (OMIM: 138244,611092) glutamate recep ( 908) 2090 468.5 2.7e-131
NP_068775 (OMIM: 138244,611092) glutamate receptor ( 908) 2090 468.5 2.7e-131
XP_005267003 (OMIM: 138244,611092) glutamate recep ( 859) 1758 395.6 2.2e-109
NP_001307559 (OMIM: 138245) glutamate receptor ion ( 410) 1538 347.1 4.3e-95
XP_005261001 (OMIM: 138245) glutamate receptor ion ( 903) 1538 347.3 8.1e-95
NP_783300 (OMIM: 138245) glutamate receptor ionotr ( 905) 1538 347.3 8.1e-95
NP_000821 (OMIM: 138245) glutamate receptor ionotr ( 918) 1538 347.3 8.2e-95
NP_001307545 (OMIM: 138245) glutamate receptor ion ( 920) 1538 347.3 8.2e-95
NP_001317922 (OMIM: 138245) glutamate receptor ion ( 934) 1538 347.3 8.3e-95
NP_001317923 (OMIM: 138245) glutamate receptor ion ( 949) 1538 347.4 8.4e-95
NP_000822 (OMIM: 138243) glutamate receptor ionotr ( 919) 1535 346.7 1.3e-94
NP_001307547 (OMIM: 138245) glutamate receptor ion ( 781) 1233 280.3   1e-74
NP_001307550 (OMIM: 138245) glutamate receptor ion ( 763)  767 178.0 6.3e-44
NP_000819 (OMIM: 300699,305915) glutamate receptor ( 894)  436 105.4 5.4e-22
NP_015564 (OMIM: 300699,305915) glutamate receptor ( 894)  436 105.4 5.4e-22
NP_000817 (OMIM: 138247) glutamate receptor 2 isof ( 883)  400 97.5 1.3e-19
NP_001077088 (OMIM: 138247) glutamate receptor 2 i ( 883)  400 97.5 1.3e-19
NP_001077089 (OMIM: 138247) glutamate receptor 2 i ( 836)  391 95.5 4.8e-19
XP_016864881 (OMIM: 138248) glutamate receptor 1 i ( 846)  377 92.4 4.1e-18
NP_001351094 (OMIM: 138248) glutamate receptor 1 i ( 850)  377 92.4 4.1e-18
NP_001107655 (OMIM: 138248) glutamate receptor 1 i ( 906)  377 92.5 4.3e-18
NP_000818 (OMIM: 138248) glutamate receptor 1 isof ( 906)  377 92.5 4.3e-18
NP_001351095 (OMIM: 138248) glutamate receptor 1 i ( 915)  377 92.5 4.3e-18
NP_001244950 (OMIM: 138248) glutamate receptor 1 i ( 916)  377 92.5 4.3e-18
NP_001244951 (OMIM: 138248) glutamate receptor 1 i ( 916)  377 92.5 4.3e-18
XP_024304223 (OMIM: 138246,617864) glutamate recep ( 425)  367 90.0 1.1e-17
NP_001269402 (OMIM: 600282) glutamate receptor ion ( 765)  370 90.9 1.1e-17
XP_024304222 (OMIM: 138246,617864) glutamate recep ( 433)  367 90.0 1.1e-17
NP_001106283 (OMIM: 138246,617864) glutamate recep ( 433)  367 90.0 1.1e-17
NP_001070712 (OMIM: 138246,617864) glutamate recep ( 433)  367 90.0 1.1e-17
XP_016873111 (OMIM: 600282) glutamate receptor ion ( 888)  370 90.9 1.2e-17
XP_016873110 (OMIM: 600282) glutamate receptor ion ( 898)  370 90.9 1.2e-17
NP_055434 (OMIM: 600282) glutamate receptor ionotr ( 956)  370 90.9 1.3e-17
NP_001269399 (OMIM: 600282) glutamate receptor ion ( 956)  370 90.9 1.3e-17
XP_016873099 (OMIM: 138246,617864) glutamate recep ( 771)  367 90.2 1.7e-17
XP_016873098 (OMIM: 138246,617864) glutamate recep ( 814)  367 90.2 1.8e-17
NP_001070711 (OMIM: 138246,617864) glutamate recep ( 884)  367 90.3 1.9e-17
XP_011541077 (OMIM: 138246,617864) glutamate recep ( 884)  367 90.3 1.9e-17
NP_000820 (OMIM: 138246,617864) glutamate receptor ( 902)  367 90.3   2e-17
XP_005271575 (OMIM: 138246,617864) glutamate recep ( 902)  367 90.3   2e-17
XP_006718886 (OMIM: 138246,617864) glutamate recep ( 902)  367 90.3   2e-17
XP_011525173 (OMIM: 600283) glutamate receptor ion ( 496)  361 88.8   3e-17
XP_011525172 (OMIM: 600283) glutamate receptor ion ( 622)  361 88.8 3.6e-17


>>XP_016866271 (OMIM: 138244,611092) glutamate receptor   (601 aa)
 initn: 2090 init1: 2090 opt: 2090  Z-score: 2481.3  bits: 468.4 E(91774): 2e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)

               10        20        30        40        50        60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
              250       260       270       280       290       300

              310       320       330       340       350          
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE       
       ::::::::::::::::: .                                         
XP_016 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
              310       320       330       340       350       360

>>XP_016866270 (OMIM: 138244,611092) glutamate receptor   (707 aa)
 initn: 2090 init1: 2090 opt: 2090  Z-score: 2480.3  bits: 468.4 E(91774): 2.2e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)

               10        20        30        40        50        60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
              250       260       270       280       290       300

              310       320       330       340       350          
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE       
       ::::::::::::::::: .                                         
XP_016 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
              310       320       330       340       350       360

>>NP_786944 (OMIM: 138244,611092) glutamate receptor ion  (869 aa)
 initn: 2090 init1: 2090 opt: 2090  Z-score: 2479.0  bits: 468.5 E(91774): 2.6e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)

               10        20        30        40        50        60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_786 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_786 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_786 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_786 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_786 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
              250       260       270       280       290       300

              310       320       330       340       350          
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE       
       ::::::::::::::::: .                                         
NP_786 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
              310       320       330       340       350       360

>>XP_024302179 (OMIM: 138244,611092) glutamate receptor   (869 aa)
 initn: 2090 init1: 2090 opt: 2090  Z-score: 2479.0  bits: 468.5 E(91774): 2.6e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)

               10        20        30        40        50        60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
              250       260       270       280       290       300

              310       320       330       340       350          
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE       
       ::::::::::::::::: .                                         
XP_024 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
              310       320       330       340       350       360

>>NP_001159719 (OMIM: 138244,611092) glutamate receptor   (892 aa)
 initn: 2090 init1: 2090 opt: 2090  Z-score: 2478.8  bits: 468.5 E(91774): 2.7e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)

               10        20        30        40        50        60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
              250       260       270       280       290       300

              310       320       330       340       350          
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE       
       ::::::::::::::::: .                                         
NP_001 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
              310       320       330       340       350       360

>>XP_024302178 (OMIM: 138244,611092) glutamate receptor   (892 aa)
 initn: 2090 init1: 2090 opt: 2090  Z-score: 2478.8  bits: 468.5 E(91774): 2.7e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)

               10        20        30        40        50        60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
              250       260       270       280       290       300

              310       320       330       340       350          
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE       
       ::::::::::::::::: .                                         
XP_024 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
              310       320       330       340       350       360

>>XP_011534079 (OMIM: 138244,611092) glutamate receptor   (892 aa)
 initn: 2090 init1: 2090 opt: 2090  Z-score: 2478.8  bits: 468.5 E(91774): 2.7e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)

               10        20        30        40        50        60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
              250       260       270       280       290       300

              310       320       330       340       350          
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE       
       ::::::::::::::::: .                                         
XP_011 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
              310       320       330       340       350       360

>>XP_005267002 (OMIM: 138244,611092) glutamate receptor   (908 aa)
 initn: 2090 init1: 2090 opt: 2090  Z-score: 2478.7  bits: 468.5 E(91774): 2.7e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)

               10        20        30        40        50        60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
              250       260       270       280       290       300

              310       320       330       340       350          
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE       
       ::::::::::::::::: .                                         
XP_005 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
              310       320       330       340       350       360

>>NP_068775 (OMIM: 138244,611092) glutamate receptor ion  (908 aa)
 initn: 2090 init1: 2090 opt: 2090  Z-score: 2478.7  bits: 468.5 E(91774): 2.7e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)

               10        20        30        40        50        60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
              250       260       270       280       290       300

              310       320       330       340       350          
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE       
       ::::::::::::::::: .                                         
NP_068 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
              310       320       330       340       350       360

>>XP_005267003 (OMIM: 138244,611092) glutamate receptor   (859 aa)
 initn: 1758 init1: 1758 opt: 1758  Z-score: 2085.2  bits: 395.6 E(91774): 2.2e-109
Smith-Waterman score: 1758; 99.3% identity (99.6% similar) in 270 aa overlap (50-319:1-270)

      20        30        40        50        60        70         
pF1KE5 LLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFAVNTINRNRTLLPNTTLTYD
                                     ::::::::::::::::::::::::::::::
XP_005                               MGAEELAFRFAVNTINRNRTLLPNTTLTYD
                                             10        20        30

      80        90       100       110       120       130         
pF1KE5 TQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVS
               40        50        60        70        80        90

     140       150       160       170       180       190         
pF1KE5 DNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRL
              100       110       120       130       140       150

     200       210       220       230       240       250         
pF1KE5 KIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTL
              160       170       180       190       200       210

     260       270       280       290       300       310         
pF1KE5 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTME
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: .
XP_005 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD
              220       230       240       250       260       270

     320       330       340       350                             
pF1KE5 FHSCCPGWSAMARSHLTATSASWVQAILLPQPPE                          
                                                                   
XP_005 AALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK
              280       290       300       310       320       330




353 residues in 1 query   sequences
64092750 residues in 91774 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Jul 16 16:01:37 2019 done: Tue Jul 16 16:01:38 2019
 Total Scan time:  3.670 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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