GENSCAN 1.0	Date run:  8-Nov-116	Time: 13:42:22

Sequence gi568815580f:74399974_74620065 : 220092 bp : 46.13% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   2643   2682   40                              -0.66
 1.01 Init +  12598  12733  136  0  1   85   83   147 0.744  12.32
 1.02 Term +  20167  20267  101  2  2  116   45    63 0.335   3.09
 1.03 PlyA +  20556  20561    6                               1.05

 2.00 Prom +  21626  21665   40                              -1.76
 2.01 Init +  30152  30187   36  1  0  114   98    19 0.766   5.51
 2.02 Intr +  34874  34962   89  1  2   97   86    60 0.796   5.47
 2.03 Term +  36869  36983  115  2  1  100   54   128 0.933   8.64
 2.04 PlyA +  38366  38371    6                               1.05

 3.04 PlyA -  39116  39111    6                               1.05
 3.03 Term -  42143  41973  171  2  0   91   54   103 0.542   5.03
 3.02 Intr -  47310  46633  678  0  0  127   98   800 0.781  76.71
 3.01 Init -  57286  57089  198  1  0   97   82   304 0.881  27.60
 3.00 Prom -  59266  59227   40                              -6.36

 4.05 PlyA -  59540  59535    6                               1.05
 4.04 Term -  61144  60899  246  1  0   48   52   189 0.288   7.09
 4.03 Intr -  78842  78681  162  2  0   23   94   132 0.722   7.47
 4.02 Intr -  87387  87301   87  0  0  129   51    91 0.144   9.67
 4.01 Init -  89895  89848   48  0  0   71   37    75 0.707   1.65
 4.00 Prom -  92002  91963   40                              -7.16

 5.00 Prom +  99223  99262   40                              -5.66
 5.01 Init + 100001 100060   60  1  0   86  116    64 0.856  10.25
 5.02 Intr + 101356 101499  144  0  0   72   97   135 0.850  13.28
 5.03 Intr + 105876 106038  163  2  1   50  101   262 0.968  23.25
 5.04 Intr + 108867 108955   89  1  2   77   85    79 0.990   6.19
 5.05 Intr + 110840 111040  201  1  0   89   77   227 0.900  21.18
 5.06 Intr + 112475 112559   85  1  1   79  106    64 0.978   6.69
 5.07 Intr + 113586 113746  161  1  2  107   47   430 0.933  40.51
 5.08 Intr + 116094 116192   99  2  0   34   97    43 0.495   0.11
 5.09 Intr + 116255 116423  169  1  1   90    6   228 0.677  14.32
 5.10 Intr + 117406 117545  140  2  2   -7   37    99 0.438  -4.52
 5.11 Intr + 118526 118667  142  1  1   64   47   153 0.914   8.73
 5.12 Intr + 118976 119123  148  0  1   86   94   178 0.998  17.49
 5.13 Term + 120026 120095   70  2  1   85   47   115 0.899   4.51
 5.14 PlyA + 121124 121129    6                               1.05

 6.06 PlyA - 123567 123562    6                               1.05
 6.05 Term - 131369 131140  230  0  2   94   41    94 0.309   2.09
 6.04 Intr - 132791 132653  139  2  1   55   64    45 0.275  -1.16
 6.03 Intr - 138755 138579  177  2  0   37   86   133 0.699   8.12
 6.02 Intr - 141241 141129  113  2  2  124   62    64 0.757   7.50
 6.01 Init - 144574 144526   49  1  1   86   58    58 0.375   1.71
 6.00 Prom - 153195 153156   40                              -3.66

 7.00 Prom + 153456 153495   40                              -5.36
 7.01 Init + 155052 155125   74  2  2   62   86     1 0.365  -2.15
 7.02 Intr + 155429 155492   64  2  1  126   37    49 0.681   2.32
 7.03 Intr + 156365 156493  129  1  0   57   91   202 0.938  18.29
 7.04 Intr + 159350 159499  150  1  0   98   53   251 0.819  22.96
 7.05 Intr + 160883 161045  163  1  1   55   73   235 0.944  18.25
 7.06 Intr + 162074 162162   89  0  2   85   58    76 0.868   3.99
 7.07 Intr + 167260 167460  201  0  0   72   53   194 0.871  13.78
 7.08 Intr + 171815 171917  103  1  1   61  111     3 0.390  -0.35
 7.09 Intr + 172139 172222   84  0  0   63   70   153 0.915  10.79
 7.10 Intr + 176896 177056  161  2  2  112   86   141 0.996  16.01
 7.11 Intr + 180157 180298  142  0  1   78   75    88 0.979   6.43
 7.12 Intr + 183588 183735  148  1  1   93   76   218 0.953  20.39
 7.13 Intr + 197782 197908  127  1  1  -13  101   121 0.412   3.98
 7.14 Term + 198570 198689  120  2  0  121   42    57 0.405   2.87
 7.15 PlyA + 199360 199365    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 204903 204863   41  0  2   84  101    32 0.853   3.76


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:74399974_74620065|GENSCAN_predicted_peptide_1|78_aa
MDLDRLPLPLQQGARCACTAAVLTNSSLSKESEVKVREARPAGTQESMSSLGYPSRAEDD
SGLSALPSQPQPFILYAT

>gi568815580f:74399974_74620065|GENSCAN_predicted_CDS_1|237_bp
atggacttggatcggcttcccctgcccctgcagcagggagctcgctgtgcctgcactgct
gcagtactgacaaattcatccctgtccaaggagagtgaagtgaaggtccgtgaggcgaga
cctgctggcactcaggaatccatgtcctcacttgggtaccccagcagagcagaggatgac
agtggcctgagcgccctgccttctcagccccagcccttcattctctatgccacgtga

>gi568815580f:74399974_74620065|GENSCAN_predicted_peptide_2|79_aa
MPSLPVTLEEEKNTIAKRVFMSMMRRPSMELCVIWKIPSGDGEHTPETIRFGNMPSLLPL
KPFSTMNKRRLREEKPTSV

>gi568815580f:74399974_74620065|GENSCAN_predicted_CDS_2|240_bp
atgcccagcctgccagtgactttagaggaggaaaagaatacaattgcaaagcgagtcttc
atgtccatgatgaggaggccctctatggaactctgtgtcatttggaagatccccagtggt
gatggggagcacactccagagaccatccgatttggaaacatgccttcacttctgcccctt
aaacccttcagcaccatgaacaaaagacgcctccgagaggagaagccaacatctgtgtga

>gi568815580f:74399974_74620065|GENSCAN_predicted_peptide_3|348_aa
MARAAGARGPAGWCRRRGRCGRGTLLAFAAWTAGWVLAAALLLRAHPGVLSERCTDEKSR
RILAALCQDYQGGTLAGDLCEDLCVAGELLFQRCLHYNRGKKVLQADWRGRPVVLKSKEE
AFSSFPPLSLLEEEAGEGGQDMPEAELLLMVAGEVKSALGLELSNSSLGPWWPGRRGPRW
RGQLASLWALLQQEEYVYFSLLQDLSPHVLPVLGSCGHFYAVEFLAAGSPHHRALFPLDR
APGAPGGGQAKAISDIALSFLDMVNHFDSDFSHRLHLCDIKPENFAIRSDFTVVAIDVDM
AFFEPKMREILEQNCTGDEDCNFFDCFSRCDLRVNKCGAQRVNNNLQV

>gi568815580f:74399974_74620065|GENSCAN_predicted_CDS_3|1047_bp
atggcgcgggcggcgggcgcgcggggccctgccgggtggtgcaggaggcgcgggcgctgc
gggcggggcacgctcctcgccttcgccgcgtggaccgcgggctgggtgctggcggccgcg
ctgctgctccgcgcgcacccgggtgtcctctccgagcgctgcaccgacgagaagagccgg
cgcatcctggccgcgctgtgccaggactaccagggcggcacgctggccggggacctctgc
gaggacctgtgtgtggcgggagagctgctgttccaacgctgcctgcactacaacagaggc
aagaaggtgctgcaggccgactggcgcggccggcccgtggtcctcaagtccaaggaggag
gccttctccagcttcccgcccctcagcctgttggaagaggaggcaggggagggtggccag
gacatgcccgaggccgaactcctcctgatggtggctggggaggtcaagagcgctctgggc
ctggagttgtccaacagcagcctggggccgtggtggccgggcaggcggggcccacgctgg
cggggacagctggccagcctgtgggccctgctgcagcaggaggagtacgtctacttcagc
ctgctgcaggacctgagcccacacgtgctgcccgtgctgggttcctgcggccacttctac
gcggtggagttcctggccgcgggcagcccccaccacagggcactcttccccctggaccgg
gccccaggtgcccctgggggtggccaggccaaggccatcagtgacatcgcactcagcttc
ttggacatggtgaaccattttgacagtgacttttcccaccgcctccacctctgcgacatc
aagccggaaaactttgccatccggagcgacttcacagtggtggctattgatgtggacatg
gccttttttgaacctaaaatgagggaaatccttgagcaaaactgcacaggagatgaagac
tgcaatttctttgactgtttttcaagatgtgatttacgagtcaacaaatgcggagcgcag
cgcgtaaacaacaacctgcaggtatga

>gi568815580f:74399974_74620065|GENSCAN_predicted_peptide_4|180_aa
MKFVGTLMSDFPDSRTVDVKLMADASAAVYGQQVSFQFVCPQPQGDIDNLRELSRSMDNL
LGSFKEYSHIPSAPESLGDWSVVQQECQDAQAAGVSPSPFLCYGSHPSPSGDPYGHLECK
TSPVALGLAFVRAAAAAALALAKPHGAGIVEGTDSDGHAASPFAQNPLESCLMVSLTKEG

>gi568815580f:74399974_74620065|GENSCAN_predicted_CDS_4|543_bp
atgaaatttgtcggcaccttgatgtcggacttcccagattccagaactgttgatgtgaag
ctcatggctgatgccagtgctgctgtctatggacagcaggtgtcttttcaatttgtgtgt
ccccagccgcagggggatattgataaccttcgagaattatctcggtccatggacaatctc
ttgggaagctttaaagagtacagccatatccccagtgccccagaaagtctaggtgactgg
tctgtggtgcagcaagagtgtcaagatgctcaagccgctggggtgtctccaagcccgttc
ctctgctatggctctcacccgagtccttctggggatccttatggacatttggagtgcaag
acctcacccgtggccctgggactggccttcgtgagggcagcagcagcagcagccctggct
ctggcaaagccccatggggcagggatagtggaagggacagacagtgacggacacgcagca
tctccctttgcacagaacccactggagagctgcttgatggtctccctcaccaaggagggc
tga

>gi568815580f:74399974_74620065|GENSCAN_predicted_peptide_5|556_aa
MAALTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLGGSVE
LVDIGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVE
RDGKLYGRGSTDDKGPVAGWINALEAYQKTGQEIPVNVRFCLEGMEESGSEGLDELIFAR
KDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGSVHEAM
TDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHSH
KSHLHLDLLPVVVRLLGQALFHTAHFPDNIPSSSKDILMHRWRYPSLSLHGIEGAFSGSG
AKTVIPRKVVGKFSIRLVPNMTPEVVGEQASHLQVEELRCVLNHIAPAQMLHSSQATLSL
GVRAHVVKGHRGATTNAVTSYLTKKFAELRSPNEFKVYMGHGGKPWVSDFSHPHYLAGRR
AMKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEG
TKMLAAYLYEVSQLKD

>gi568815580f:74399974_74620065|GENSCAN_predicted_CDS_5|1671_bp
atggcggccctcactaccctgtttaagtacatagatgaaaatcaggatcgctacattaag
aaactcgcaaaatgggtggctatccagagtgtgtctgcgtggccggagaagagaggcgaa
atcaggaggatgatggaagttgctgctgcagatgttaagcagttggggggctctgtggaa
ctggtggatatcggaaaacaaaagctccctgatggctcggagatcccgctccctcctatt
ctgctcggcaggctgggctccgacccacagaagaagaccgtgtgcatttacgggcacctg
gatgtgcagcctgcagccctggaggacggctgggacagcgagcccttcaccctggtggag
cgagacggcaagctgtatgggagaggttcgactgatgataagggcccggtggccggctgg
ataaacgccctggaagcgtatcagaaaacaggccaggagattcctgtcaacgtccgattc
tgcctcgaaggcatggaggagtcaggctctgagggcctagacgagctgatttttgcccgg
aaagacacattctttaaggatgtggactatgtctgcatttctgacaattactggctggga
aagaagaagccctgcatcacctacggcctcaggggcatttgctactttttcatcgaggtg
gagtgcagcaacaaagacctccattctggggtgtacgggggctcggtgcatgaggccatg
actgatctcattttgctgatgggctctttggtggacaagagggggaacatcctgatcccc
ggcattaacgaggccgtggccgccgtcacggaagaggagcacaagctgtacgacgacatc
gactttgacatagaggagtttgccaaggatgtgggggcgcagatcctcctgcacagccac
aagtcgcacctgcacctggacctcctgcctgtggttgtcaggctcctgggccaggccctg
tttcataccgctcatttcccagacaacattcccagctcctcgaaagacatcctcatgcac
cgatggcggtacccgtctctgtccctccatggcatcgaaggcgccttctctgggtctggg
gccaagaccgtgattcccaggaaggtggttggcaagttctccatcaggctcgtgccgaac
atgactcctgaagtcgtcggcgagcaggcatctcatctgcaggtggaggagcttcggtgc
gtgctgaatcacatcgcacctgctcagatgttacattccagccaagccacactgagcctc
ggtgtaagagcacatgtggtcaaaggtcacagaggcgcaaccactaatgcggtcacaagc
tacctaactaagaagtttgctgaactacgcagccccaatgagttcaaggtgtacatgggc
cacggtgggaagccctgggtctccgacttcagtcaccctcattacctggctgggagaaga
gccatgaagacagtttttggtgttgagccagacttgaccagggaaggcggcagtattccc
gtgaccttgacctttcaggaggccacgggcaagaacgtcatgctgctgcctgtggggtca
gcggatgacggagcccactcccagaatgaaaagctcaacaggtataactacatagaggga
accaagatgctggccgcgtacctgtatgaggtctcccagctgaaggactag

>gi568815580f:74399974_74620065|GENSCAN_predicted_peptide_6|235_aa
MGFHHVGLAGLELLTSGASAEPMTEAALTVSPQRVMAPNCSPISPSTFRTYKFPRMPGIT
KSDNKCFEDVEKLEPSHTASEDAKWCSQHGKQSGSSSDTDPRSYCINRQFHSQAGLLELQ
AQHSSSQEVGLALLPKAKLLGSYSEFRGLERKERVRLGPVWHLSVSGVAQARSALQSHPV
EREMDLRQPVLPGGRERSATSAVFTSFHFLLFLNHLDQATATKDLCNDAPRCRSV

>gi568815580f:74399974_74620065|GENSCAN_predicted_CDS_6|708_bp
atggggtttcaccatgttggcctggctggtctcgaactcctgacctcaggtgcgtcagca
gagcccatgaccgaggctgcactcactgtgagcccccagcgggtgatggctcccaactgc
agccccatttccccctccactttcagaacctacaagtttccgaggatgccgggaatcaca
aagtcagataacaagtgttttgaggatgtggagaaattggagccctcacacactgctagt
gaggatgcaaaatggtgcagccagcatggaaagcagtctggcagttcctcagacactgat
ccacggagctactgtatcaaccggcaattccactcccaggccgggctccttgagctccag
gcccagcacagcagctcccaggaagtgggcctggcccttcttccgaaggccaagttgctg
ggatcatactcagaattccgagggctggaaaggaaggagagggtgaggctgggcccagtg
tggcatctttctgtatctggtgtagcacaagcacgtagcgccctgcagtcacacccagtg
gagagagaaatggacctcaggcagcctgtactcccaggagggagggaaagatctgctacc
tcagcggtattcaccagcttccattttctcctcttcctcaaccatctagaccaagctact
gccaccaaggatctgtgtaatgacgcaccacgatgccgatcagtctga

>gi568815580f:74399974_74620065|GENSCAN_predicted_peptide_7|584_aa
MALRLHQPSSPCSPRNPCSPPPTESPPLMARAALGEMLLMAPPDVQAASLLAVLLLLLER
GMFSSPSPPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAA
DTLQRLGARVASVDMGPQQLPDGQSLPIPPVILAELGSDPTKGTVCFYGHLDVQPADRGD
GWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAG
SVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVETGPSADQPAP
CSMWVLGVGDQVCPCSATDHLYDLGCCGPEWHSDADEFPDCPGAVLDFPWIAGSLVDSSG
HILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKVTRHLEDVFSKRNS
SNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVHK
SVVLIPLGAVDDGEHSQNEKINSSKILFFGCGVRRCIHYGVALEATGSPSTEKQDVPPLP
PKGKTVPWLRRCYSRLLPLSDAGVGGRRAHKCGGRKHRGGSEGS

>gi568815580f:74399974_74620065|GENSCAN_predicted_CDS_7|1755_bp
atggcactgagacttcaccagcctagttccccttgttctccccgcaacccctgctcacct
ccacctacggaaagcccgcctctgatggctcgggctgcactgggggagatgttgctgatg
gcccctccagatgtgcaggctgcgtccctgctggctgtgctgctgctgctgctggagcgc
ggcatgttctcctcaccctccccgcccccggcgctgttagagaaagtcttccagtacatt
gacctccatcaggatgaatttgtgcagacgctgaaggagtgggtggccatcgagagcgac
tctgtccagcctgtgcctcgcttcagacaagagctcttcagaatgatggccgtggctgcg
gacacgctgcagcgcctgggggcccgtgtggcctcggtggacatgggtcctcagcagctg
cccgatggtcagagtcttccaatacctcccgtcatcctggccgaactggggagcgatccc
acgaaaggcaccgtgtgcttctacggccacttggacgtgcagcctgctgaccggggcgat
gggtggctcacggacccctatgtgctgacggaggtagacgggaaactttatggacgagga
gcgaccgacaacaaaggccctgtcttggcttggatcaatgctgtgagcgccttcagagcc
ctggagcaagatcttcctgtgaatatcaaattcatcattgaggggatggaagaggctggc
tctgttgccctggaggaacttgtggaaaaagaaaaggaccgattcttctctggtgtggac
tacattgtaatttcagataacctgtggatcagccaaaggaagccagcaatcacttacgga
acccgggggaacagctacttcatggtggagactggcccttccgcagaccagcctgcacct
tgtagcatgtgggttctgggtgtgggtgaccaggtatgtccttgctctgccacagaccac
ctgtacgaccttggttgctgtggccccgagtggcacagcgacgccgacgagttccccgat
tgtcctggtgctgtccttgatttcccatggattgctggtagcctggtagactcgtctggt
catatcctggtccctggaatctatgatgaagtggttcctcttacagaagaggaaataaat
acatacaaagccatccatctagacctagaagaataccggaatagcagccgggttgagaaa
tttctgttcgatactaaggtgacacgacatcttgaagatgtgttctccaaaagaaatagt
tccaacaagatggttgtttccatgactctaggactacacccgtggattgcaaatattgat
gacacccagtatctcgcagcaaaaagagcgatcagaacagtgtttggaacagaaccagat
atgatccgggatggatccaccattccaattgccaaaatgttccaggagatcgtccacaag
agcgtggtgctaattccgctgggagctgttgatgatggagaacattcgcagaatgagaaa
atcaacagttccaagattctgtttttcggctgtggcgtccggcgctgcatccactacgga
gtcgccttggaagccaccggaagtccttcgacggagaaacaggatgtcccgcctcttcct
cccaaagggaagacggtgccctggctgcgccgctgctactcgcgccttcttccgttaagc
gacgctggtgtgggcgggcggagggcacacaagtgcggtggccgaaagcaccgcggtggc
agcgaagggtcctag