GENSCAN 1.0	Date run:  8-Nov-116	Time: 01:54:15

Sequence gi568815592f:42464320_42717507 : 253188 bp : 40.94% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    398    393    6                               1.05
 1.03 Term -   2696   2602   95  0  2   85   52    69 0.246   0.01
 1.02 Intr -  19508  19431   78  0  0  102   95    49 0.815   5.60
 1.01 Init -  19761  19656  106  0  1   68   64    73 0.594   3.33
 1.00 Prom -  26745  26706   40                              -4.65

 2.00 Prom +  27806  27845   40                              -5.75
 2.01 Init +  34717  34726   10  0  1   73   93     2 0.454   0.01
 2.02 Term +  35359  35699  341  2  2   27   40   275 0.946  10.31
 2.03 PlyA +  36746  36751    6                               1.05

 3.00 Prom +  43246  43285   40                              -6.75
 3.01 Init +  46659  46689   31  2  1   85  107    30 0.545   4.55
 3.02 Term +  50609  50724  116  0  2   23   45   184 0.958   5.35
 3.03 PlyA +  50946  50951    6                               1.05

 4.00 Prom +  76740  76779   40                              -3.05
 4.01 Sngl +  83136  83702  567  2  0   50   34   384 0.490  25.10
 4.02 PlyA +  84410  84415    6                               1.05

 5.00 Prom +  87349  87388   40                              -4.55
 5.01 Init + 100001 100078   78  1  0   92   84   166 0.863  17.71
 5.02 Intr + 100120 100212   93  0  0   76   42    92 0.733   2.64
 5.03 Intr + 109415 109674  260  1  2   94   98   128 0.635   9.74
 5.04 Intr + 127832 127910   79  2  1   98   44    49 0.110   0.13
 5.05 Intr + 129872 129985  114  1  0   36   83   109 0.213   4.92
 5.06 Intr + 139269 139399  131  2  2  116   78   101 0.996  10.47
 5.07 Intr + 141402 141540  139  0  1   43   95   134 0.993   9.15
 5.08 Intr + 142270 142332   63  0  0   67  103    36 0.659   1.00
 5.09 Intr + 152921 153019   99  1  0   56  105    55 0.910   3.39
 5.10 Intr + 153090 153188   99  2  0   85   89   121 0.980  11.29
 5.11 Intr + 168233 168396  164  1  2   74  108   112 0.913   9.65
 5.12 Intr + 168486 168585  100  0  1  104   91    22 0.985   3.29
 5.13 Intr + 171099 171227  129  2  0   51   76    96 0.593   4.67
 5.14 Intr + 178097 178162   66  1  0   74   95    32 0.106   0.68
 5.15 Intr + 179964 180017   54  2  0   46  116    32 0.032   0.06
 5.16 Intr + 180154 180217   64  0  1   98  111    30 0.997   3.67
 5.17 Intr + 181147 181271  125  2  2   70   95    79 0.973   6.18
 5.18 Intr + 183799 183851   53  0  2   59   89    44 0.549  -1.61
 5.19 Intr + 185965 186067  103  1  1  106   86    60 0.532   6.86
 5.20 Intr + 193921 194001   81  0  0   80   60   106 0.931   5.92
 5.21 Intr + 194327 194505  179  1  2  -36   66   215 0.957   4.70
 5.22 Intr + 198939 199100  162  0  0   53  108   103 0.472   6.97
 5.23 Intr + 201090 201193  104  0  2   83   94    23 0.363   1.30
 5.24 Intr + 201848 201926   79  0  1   45   78    97 0.623   2.09
 5.25 Intr + 205773 205921  149  0  2   73   82    88 0.958   5.66
 5.26 Intr + 206341 206396   56  2  2   66  119    41 0.689   2.78
 5.27 Intr + 211737 211872  136  2  1   83   93    24 0.897   1.62
 5.28 Intr + 212464 212554   91  2  1   48  113   104 0.977   7.03
 5.29 Intr + 220475 220552   78  2  0  106   99    14 0.753   2.05
 5.30 Intr + 223897 224067  171  1  0   27   94    88 0.660   1.44
 5.31 Intr + 225250 225351  102  1  0   84  110    27 0.868   2.87
 5.32 Term + 226713 226854  142  0  1  116   32   103 0.921   3.92
 5.33 PlyA + 226940 226945    6                               1.05

 6.07 PlyA - 226954 226949    6                               1.05
 6.06 Term - 233224 232760  465  1  0    5   47   227 0.535   4.33
 6.05 Intr - 234188 234024  165  2  0  100   44   216 0.890  17.64
 6.04 Intr - 240292 240046  247  0  1   51   80   267 0.510  18.74
 6.03 Intr - 240858 240702  157  1  1   64   67    67 0.151   0.35
 6.02 Intr - 244097 243842  256  2  1   75   40   189 0.318   8.89
 6.01 Init - 249124 248951  174  1  0   36   64   131 0.554   3.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  32978  32637  342  2  0   63   36   195 0.852   7.58


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:42464320_42717507|GENSCAN_predicted_peptide_1|92_aa
MDERRSGFDYIKQQWLKHKRLIHLQKRSLEEIVRECSRSVKAGEDKMSGLPEESAPLKQS
SYTATIRFLNLFPTLPPFLFHKTAIAIMTRSQ

>gi568815592f:42464320_42717507|GENSCAN_predicted_CDS_1|279_bp
atggacgagagaagaagtgggtttgactatattaaacaacaatggcttaaacataaaagg
cttattcatttacagaaaagaagtctagaggagatagtccgggaatgcagcaggagtgtg
aaagcaggagaggacaaaatgtccggccttcctgaagaatctgctccccttaagcaatct
tcctacacagcaaccatccgatttctcaatcttttccccacccttcccccttttctattc
cacaaaaccgccattgccatcatgacccgttctcaatga

>gi568815592f:42464320_42717507|GENSCAN_predicted_peptide_2|116_aa
MVEAFCANNAPANIVSVPKTQWIFCKKCGKHQPHKVTQYKKGKNCLYAQGKQPYDGKHSG
YDGQTKRIFQKKAKTTKKTVLRLERVEPNCISKRMLAIKICEHFELGGDKKKRGAK

>gi568815592f:42464320_42717507|GENSCAN_predicted_CDS_2|351_bp
atggtggaagctttctgtgccaataatgctcctgcaaacattgtgagtgttcctaaaact
cagtggattttctgtaagaagtgtggcaagcaccaaccccacaaagtgacacagtacaag
aagggcaagaattgtctatatgcccagggaaaacagccttatgatgggaagcatagtggc
tatgatggacagactaagcggattttccaaaaaaaggctaaaactacaaagaagacagtg
ctaaggcttgagcgcgttgagcccaactgcatatctaagagaatgctggctattaagata
tgcgagcattttgaactgggaggagataagaagaaaaggggggccaagtga

>gi568815592f:42464320_42717507|GENSCAN_predicted_peptide_3|48_aa
MDGGRPPDLGGSKEDEEEPANETETEHPEIQEENQVTMVSSKPDEGSY

>gi568815592f:42464320_42717507|GENSCAN_predicted_CDS_3|147_bp
atggatggaggaagacctcctgatttgggaggaagtaaggaagatgaagaggaaccagca
aatgagactgaaacagaacacccagaaatacaggaagaaaaccaggtgacaatggtgtct
tcaaagccagatgaaggaagttattaa

>gi568815592f:42464320_42717507|GENSCAN_predicted_peptide_4|188_aa
MKCVSLTADDRSLLGIPEGGEGLSLWLLVLRMLPLNVSYQLLMEAKTRDIKYFGVPSCIT
GIGHVQTKASSSAEEELQRSKSSAPRRLVPPPALRRPAWARAPPAGSRHRCRRSTVDSEL
PPVLWVALPPSLLKPPAVAVPLYPAWGGYLERRMRGFFPVGRTKGSTDDLKLGSREQTRL
SCIQIRRQ

>gi568815592f:42464320_42717507|GENSCAN_predicted_CDS_4|567_bp
atgaagtgtgtctccttaactgctgatgaccggagccttctgggaattcctgagggaggg
gaaggacttagcctgtggcttctagtcctgaggatgctccctttgaatgtcagttaccag
ctgcttatggaagctaagacaagggacatcaagtacttcggggtcccaagctgtataaca
ggaatcggtcacgttcaaacaaaagctagctccagtgctgaagaggaactccagagatcg
aaaagctcagccccacggaggttggtccctcctccggcactgcggaggccagcctgggca
agggcgccccctgcaggctcccggcatcggtgccggagaagcacggtggactctgagctg
ccgccggttttgtgggtggctttgcctccctcacttctaaaacctccagcggtggcggtc
cccttataccctgcctgggggggatacttggagaggagaatgaggggcttcttcccagtg
ggcagaaccaaaggcagtaccgatgacttgaagctgggctctagagagcaaacaagactt
tcctgtattcaaattcgcaggcagtga

>gi568815592f:42464320_42717507|GENSCAN_predicted_peptide_5|1180_aa
MASELEPEVQAIDRSLLECSAEEIAGAAPVGRNRLLDVLEQPDPDLGKQLCRPSPCGKWL
QATDLTREVYQHLAHYVPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKL
EQANKPSHLCGRVFKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFC
DCGDTEAWKEGPYCQKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWE
KESELPADLEMVEKSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGR
RSVRYGDFQYCEQAKSVIVNYQQLQRDFMEDDHERAVSVTALSVQFFTAPTLNYERLQSD
YVTDDHDREFSVADLSVQIFTVPSLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFER
YTALQAFKFRRVQSLILDLKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGMDPITR
QVGQHIEMEPEWEAAFTLQMKLTHVISMMQDWCASDIYYYHNVKCRREMFDKDVVMLQIF
STPDYGKRFSSEITHKDVVQQNNTLIEEMLYLIIMLVGERFSPGVGQVNATDEIKREIIH
QLSIKPMAHSELVKSLPEDENKETGMESVIEAVAHFKKPGLTGRGMYELKPECAKEFNLY
FYHFSRAEQSKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRRE
KIMAQMSEMQRHFIDENKELFQQTLELDASTSAVLDHRYFDSVQAKEQRRQQRLRLHTSY
DVENGEFLCPLCECLSNTVIPLLLPPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFLR
KEESTPNNASTKNSENVDELQLPEGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVHP
NEEDPRVPIMCWGSCAYTIQSIERILSDEDKPLFGPLPCRLVGLVLAFPALQCQDFSGIS
LGTGDLHIFHLVTMAHIIQILLTSCTEENGMDQENPPCEEESAVLALYKTLHQYTGRYPR
ESNKLINLPEDYSSLINQASNFSCPKSGGDKSRAPTLCLVCGSLLCSQSYCCQTELEGED
VGACTAHTYSCGSGVGIFLRVRECQVLFLAGKTKGCFYSPPYLDDYGETDQGLRRGNPLH
LCKERFKKIQKLWHQHSVTEEIGHAQEANQTLVGIDWQHL

>gi568815592f:42464320_42717507|GENSCAN_predicted_CDS_5|3543_bp
atggcgtcggagctagagccagaggtgcaggccatcgaccggagcttgctggaatgttcg
gccgaggagattgcgggggccgcgcctgtggggaggaaccgactcctggacgtcctggag
cagcccgacccagacttggggaaacagctgtgccggccctcgccttgtgggaaatggctg
caagcaactgacctcactagagaagtgtaccagcatttagcccactatgtacccaaaatc
tactgcaggggtcccaacccttttccacagaaagaagacatgctggcacagcatgttttg
ttgggaccaatggaatggtacctttgtggtgaagatcctgcatttggatttccaaaactt
gagcaagcaaacaaaccttctcatctttgtggtcgtgtttttaaagtaggagagcctaca
tattcttgcagagactgtgcagttgatccaacttgtgttttgtgcatggagtgctttttg
ggaagtattcacagagatcatcgatataggatgacaacatcaggaggtggaggtttctgt
gactgtggtgatactgaagcctggaaagagggtccttactgtcaaaaacatgaacttaac
acctctgaaattgaggaagaagaggatcctcttgttcatttatcagaagatgtgatagca
agaacttataacatttttgctattacgtttcggtatgcagtagaaatattaacctgggaa
aaagaaagtgaattgccagcagatttagagatggtagagaagagtgacacctactattgc
atgctgtttaatgatgaggttcacacctatgaacaagttatttatactcttcagaaagct
gttaactgtacacaaaaagaagctattggttttgcaactacagtagatcgagatgggcgt
aggtctgttcgatatggagattttcagtattgtgagcaagcaaaatcagtaattgtgaat
taccagcagttgcagagagattttatggaggatgatcacgagcgagcagtgtcggtgact
gctctatctgtccagttcttcaccgcacctactctgaactatgagcgtttgcagagtgat
tatgtgacagatgaccacgacagagagttttcagtcgcagacctctcggttcagatattc
acggttccttcacttgctcgaatgctcatcacagaagaaaacttaatgagcattatcatt
aagacttttatggatcatttgagacatcgagatgcccagggcagatttcagtttgaacga
tacactgctttacaagccttcaaatttaggagagtacagagccttattttagatctcaag
tatgtgttaattagcaaaccaactgaatggtcagatgagctgaggcagaagttcctagaa
gggtttgatgcctttttggaattactaaaatgtatgcagggaatggatccaattacacgt
caagtaggacaacatattgaaatggaaccagagtgggaagcagccttcacactacaaatg
aaattaacacatgtcatttcaatgatgcaggactggtgtgcttcagatatttattactac
cataatgtgaaatgcagacgtgagatgtttgacaaggatgtagtaatgcttcagattttc
agtactccagactatggaaaaagatttagttctgagattacccataaggatgttgttcag
cagaacaatactctaatagaagaaatgctatacctcattataatgcttgttggagagaga
tttagtcctggagttggacaggtaaatgctacagatgaaatcaagcgagagattatccat
cagttgagtatcaagcctatggctcatagtgaattggtaaagtctttacctgaagatgag
aacaaggagactggcatggagagtgtaatcgaagcagttgcccatttcaagaaacctgga
ttaacaggacgaggcatgtatgaactgaaaccagaatgtgccaaagagttcaacttgtat
ttctatcacttttcaagggcagaacagtccaagacttttaatgctgttaaaaagatgagg
gagagttcacctaccagtcccgtggcagagacagaaggaaccataatggaagagagttca
agggacaaagacaaagctgagaggaagagaaaagcagagattgccagactgcgcagagaa
aagatcatggctcagatgtctgaaatgcagcggcattttattgatgaaaacaaagaactc
tttcagcagacattagaactggatgcctcaacctctgctgttcttgatcataggtatttt
gattccgttcaagctaaagaacagcgaaggcaacagagattacgcttacatacgagctat
gatgtagaaaacggagaattcctttgccccctttgtgaatgcttgagtaatactgttatt
cctctgctgcttcctccaagaaatatttttaacaacaggttaaatttttcagaccaacca
aatctgactcagtggattagaacaatatctcagcaaataaaagcattacagtttcttagg
aaagaagaaagtactcctaataatgcctctacaaagaattcagaaaatgtggatgaatta
cagctccctgaagggttcaggcctgattttcgtcctaagatcccttattctgagagcata
aaagaaatgctaacgacatttggaactgctacctacaaggtgggactaaaggttcatccc
aatgaagaggatcctcgtgttcccataatgtgttggggtagctgcgcgtacaccatccaa
agcatagaaagaattttgagtgatgaagataaaccattgtttggtcctttaccttgcaga
ctggtgggcttggtgcttgcatttcctgcgttgcagtgtcaggatttttcagggatcagc
cttggcactggagaccttcacattttccatctggttactatggcacacatcatacagatc
ttacttacctcatgtacagaagagaatggcatggatcaagaaaatcccccttgtgaagaa
gaatcagcagttcttgctttgtataaaacacttcaccagtatacgggaagatatccaaga
gaatctaacaaattaataaaccttccagaggattacagcagcctcattaatcaagcatcc
aatttctcgtgcccgaaatcaggtggtgataagagcagagccccaactctgtgccttgtg
tgcggatctctgctgtgctcccagagttactgctgccagactgaactggaaggggaggat
gtaggagcctgcacagctcacacctactcctgtggctctggagtgggcatcttcctgaga
gtacgggaatgtcaggtgctatttttagctggcaaaaccaaaggctgtttttattctcct
ccttaccttgatgactatggggagaccgaccagggactcagacggggaaatcctttacat
ttatgcaaagagcgattcaagaagattcagaagctctggcaccaacacagtgtcacagag
gaaattggacatgcacaggaagccaatcagacactggttggcattgactggcaacattta
taa

>gi568815592f:42464320_42717507|GENSCAN_predicted_peptide_6|487_aa
MGLSLGFNLPHLPPLAWWSWVGQEEGDTLPATLGGGSQREEPSPGMLSPSLTLSFQSKPG
AQRGAAEGQLSKTQFLPSPRTWLEWGFEWWAGSASGQVLRVRPTMEGGPHDPALKELTAS
LPQLVEPARPTPQGGLSHDMIWRGESGAPTWLGVESSEGKDCACLGSPSPASAQALGLSR
PSGNTWLERALATSDLRIKSNVDGRYLVDGVPFSCCNPSSPRPCIQYQITNNSAHYSYDH
QTEELNLWVRGCRAALLSYYSSLMNSMGVVTLLIWLFEVTITIGLRYLQTSLDGVSNPEE
SESESQGWLLERSVPETWKAFLESVKKLGKGNQHHTTPKVPGDLLWLIGGSSGVGCCPAV
EEEQQSDMSPPFGDQASALGGPRDTHTGGHHSPMDNTNCPQQRARNPLGASSVSSPQIPI
LKNTISGMLLHQRRFFEIAHLPELANTGVFTFFRKEKLSGEGENDFADFPSPGDQTKAGP
SIIPPVG

>gi568815592f:42464320_42717507|GENSCAN_predicted_CDS_6|1464_bp
atggggctgtcactgggcttcaacctcccacatctccctcccctggcctggtggtcctgg
gtgggccaggaagagggggacacacttcctgctacacttggaggaggctctcagagggag
gagccaagtccaggaatgctgtctccctcactgactctgtcttttcagagcaagcccggt
gcccagagaggggctgcagaaggacagctgagcaagacacagtttctgccttccccacgc
acatggctggagtggggctttgagtggtgggcaggcagtgccagcgggcaggtgctccgt
gtcaggcccaccatggagggtggcccgcacgatcctgccctcaaggagctgacagcttct
ttgccacagctggtagaacctgcacggccaactccccagggagggctctcccatgatatg
atatggcgtggtgagtcaggagctcccacctggctgggggtggagtcctccgagggcaag
gactgtgcctgcctcgggtctccatcccctgcctctgcacaggccctgggactgagcagg
ccttctggaaacacctggctggaaagggccttggccaccagtgaccttcgaatcaagagc
aacgtggatgggcggtacctggtggacggcgtccctttcagctgctgcaatcctagctcg
ccacggccctgcatccagtatcagatcaccaacaactcagcacactacagttacgaccac
cagacggaggagctcaacctgtgggtgcgtggctgcagggctgccctgctgagctactac
agcagcctcatgaactccatgggtgtcgtcacgctcctcatttggctcttcgaggtgacc
attacaattgggctgcgctacctacagacgtcgctggatggtgtgtccaaccccgaggaa
tctgagagcgagagccagggctggctgctggagaggagcgtgccggagacctggaaggcc
tttctggagagtgtgaagaagctgggcaagggcaaccagcaccacaccacccctaaagtg
ccaggtgatctcctgtggctcatcggtggaagcagtggggtaggctgctgccctgctgtg
gaagaggagcaacaatcagacatgagtccaccctttggagaccaggcctcagctcttggt
gggcccagggacacccacacaggtggccatcacagccccatggacaacactaattgtcca
cagcaaagggcaaggaatcctctgggagcttcttccgtttcttccccccagatacccatc
ttgaaaaacactatttctggaatgcttctgcatcaaaggagattctttgagatagcccat
cttcctgagctagcaaatacaggagttttcactttctttaggaaagagaagctttcaggg
gaaggagagaatgattttgctgacttcccaagccctggtgaccagaccaaggcagggccc
agcataattcctccagttggatga