GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:19:00

Sequence gi568815577f:42793334_43009018 : 215685 bp : 48.42% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  25410  25663  254  2  2   76   90    88 0.128   4.64
 1.02 Intr +  42205  42286   82  1  1   33  105    51 0.050   0.94
 1.03 Intr +  45842  45905   64  1  1   96   86    33 0.053   2.19
 1.04 Intr +  49082  49291  210  0  0   76   82    65 0.325   3.58
 1.05 Term +  49768  49922  155  2  2   52   42   153 0.683   5.18
 1.06 PlyA +  52796  52801    6                               1.05

 2.15 PlyA -  54349  54344    6                               1.05
 2.14 Term -  56909  56716  194  0  2  104   43   231 0.987  17.78
 2.13 Intr -  58991  58922   70  2  1   76  100    90 0.959   7.75
 2.12 Intr -  60475  60236  240  1  0   47   94   296 0.804  23.85
 2.11 Intr -  61223  61058  166  1  1  -39   72   185 0.653   4.16
 2.10 Intr -  61293  61229   65  0  2  100  102    77 0.794   7.82
 2.09 Intr -  62447  62349   99  2  0   83   70    84 0.031   6.41
 2.08 Intr -  65532  65391  142  2  1   58   32    62 0.061  -2.04
 2.07 Intr -  66154  66027  128  1  2   78   75    84 0.401   5.58
 2.06 Intr -  66389  66329   61  1  1  136   98    31 0.958   7.64
 2.05 Intr -  69151  68949  203  1  2   35   70   216 0.583  12.58
 2.04 Intr -  70263  70107  157  2  1   81   66   140 0.830  11.11
 2.03 Intr -  80358  80218  141  2  0  129   80    28 0.422   5.57
 2.02 Intr -  83434  83369   66  0  0   92   76    66 0.697   3.82
 2.01 Init -  86162  86074   89  2  2   76   94   130 0.508  10.70
 2.00 Prom -  95734  95695   40                              -4.26

 3.00 Prom +  97033  97072   40                              -9.95
 3.01 Init + 100001 100048   48  1  0  107   98    86 0.838  10.61
 3.02 Intr + 100217 100369  153  1  0   19   64    95 0.131   0.47
 3.03 Intr + 103594 103714  121  0  1   49   69    78 0.229   2.07
 3.04 Intr + 109849 110943 1095  2  0   98   36   546 0.592  40.35
 3.05 Intr + 115124 115150   27  0  0   86   87    34 0.644   1.19
 3.06 Term + 115531 115688  158  2  2   94   55   110 0.977   6.40
 3.07 PlyA + 115746 115751    6                               1.05

 4.08 PlyA - 116362 116357    6                               1.05
 4.07 Term - 125958 125884   75  0  0   84   43    66 0.188  -0.46
 4.06 Intr - 126227 126026  202  1  1   34   73    58 0.138  -1.81
 4.05 Intr - 126925 126742  184  2  1  111   54   146 0.334  12.35
 4.04 Intr - 130031 129827  205  2  1   47  115    73 0.306   4.67
 4.03 Intr - 130470 130268  203  1  2   76   39    44 0.137  -2.70
 4.02 Intr - 132281 132013  269  1  2   86  119    36 0.471   3.68
 4.01 Init - 138480 138395   86  0  2   89   28   106 0.560   5.13
 4.00 Prom - 143782 143743   40                              -4.16

 5.06 PlyA - 145045 145040    6                               1.05
 5.05 Term - 160389 160228  162  0  0   76   48    93 0.355   2.04
 5.04 Intr - 161295 161195  101  1  2  110   28    33 0.513  -0.67
 5.03 Intr - 162238 162108  131  0  2   24   81   152 0.415   8.44
 5.02 Intr - 162462 162388   75  2  0   57   74    75 0.307   1.63
 5.01 Init - 171873 171770  104  0  2   65   94   111 0.567   9.11
 5.00 Prom - 178017 177978   40                              -4.66

 6.00 Prom + 180242 180281   40                              -6.06
 6.01 Init + 181899 181964   66  2  0  101   52   180 0.870  14.77
 6.02 Intr + 199078 199241  164  0  2   58   18    86 0.000  -2.63
 6.03 Intr + 209868 209985  118  0  1   77   53    84 0.040   4.27
 6.04 Term + 214158 214289  132  2  0  102   39   101 0.730   4.69
 6.05 PlyA + 215056 215061    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  62555  62349  207  2  0   78   70   202 0.885  16.22


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:42793334_43009018|GENSCAN_predicted_peptide_1|254_aa
MKVAVHKPGKEPLLGTRPGQHLDLRLLASRSPNAMRRYPRDLAPELSWCRVPDPKRDEES
LLMGTAVAHRVPGPEKSGQDIHVRSPGTNQFSKDCQFHTLENSARKRRSECKEFALQGFS
FRSLAEGVPVAFQGGIDVTCLVHSEPEATRPPPGDSLGKRPPDSQVPMKFCTGAAAVQEM
GGPCLHPVWKGSGASGPLGLPGIVKNLLHRLSSGKTYPISRGQITDAPRLTMELHPNKLI
VGRQIARKWSTDRT

>gi568815577f:42793334_43009018|GENSCAN_predicted_CDS_1|765_bp
atgaaggtagctgtccacaagccaggaaaggagcccttactgggaacccgaccaggccag
caccttgatctcagacttcttgcctccagaagccccaatgcaatgaggaggtatccacgg
gacctggccccagaattgtcctggtgcagagttccagatcccaaaagggatgaggagagt
ttacttatggggacagcagtggcccacagagtgccaggacccgagaagagtggtcaggac
atccatgttaggagtcctggaacaaaccagttctccaaggattgccagtttcatacgctg
gagaatagtgctagaaaacgaagatctgagtgcaaggaatttgctctccagggtttttca
ttccgctccttagcagaaggtgttcctgttgctttccaaggtggcattgacgtgacctgc
ctagtgcacagtgagcctgaggcaacacggccaccaccaggagactccctggggaagagg
cccccagacagccaggtgcccatgaagttctgcacaggggccgccgccgtccaggagatg
ggagggccctgtctgcaccctgtctggaaggggagtggggcgagcgggccacttggcctc
cctggtatagtcaaaaatttactacacagactcagtagcggaaaaacatatcccataagc
agaggacaaatcacagatgctcctcgacttacgatggagctacatccgaacaagctcatc
gtcggccgacagatcgcacgcaagtggtccacggatcgcacataa

>gi568815577f:42793334_43009018|GENSCAN_predicted_peptide_2|606_aa
MAGSVGLALCGQTLVVRGGSRFLATSIASSDDDSLFIYDCSAAEKKSQENKGEDAPLDQG
SGAILASTFSKSGSYFALTDDSKRLILFRTKPWQCLSVRTVARRCTALTFIASEEKVLVA
DKSGDVYSFSVLEPHGCGRLELGHLSMLLDVAAASLPSSMRDLIREDSGERLFLFWPLVM
QAVSPDDRFILTADRDEKIRVSWAAAPHSIESFCLGHTEFVSRISVVPTQPGLLLSSSGD
CVWGVRRCVCVRLWDELARVCGRLPSEGGCCIYDGIGDQDLRMADGPSGRFYVSSLIGLH
SQPPVPALQINTQPRDLREEEKCGHNLQRDGTLRLWEYRSGRQLHCCHLASLQELVDPQA
PQKFAASRIAFWCQENCVALLCDGCGGTSMASGSADLQGEELAGWPLAHVLNEEVLNGGG
IGLAPPSENVTFDDCCCMRSGARGPAVLVIMLSFFVASTPVVYIFQLDARRQQLVYRQQL
AFQHQVWDVAFEETQGLWVLQDCQEAPLVLYRPVGDQWQSVPESTVLKKVSGVLRGNWAM
LEGSAGADASFSSLYKATFDNVTSYLKKKEERLQQQLEKKQRRRSPPPGPDGHAKKMRPG
EATLSC

>gi568815577f:42793334_43009018|GENSCAN_predicted_CDS_2|1821_bp
atggcgggctctgtgggactggcgttgtgcgggcagacgttggtggtgcggggcggcagc
cgattcctggccacctccatagcaagcagtgatgatgacagcctcttcatctatgactgc
agtgctgcagaaaagaagtcacaagaaaataaaggggaggacgcgcccttggaccagggg
agcggtgcgattctggcgtccaccttctccaagtctggcagctattttgctttaaccgat
gacagtaagcgtctgattcttttccgtacaaaaccatggcaatgtctgagtgtcaggacc
gtggcaaggaggtgtacagccctgactttcatagcctcggaggagaaggtcttggtggcc
gacaagtctggagacgtctactccttttcggtgctggagccacacgggtgtggccgtcta
gagctggggcacctgtctatgctgttagatgtggctgcagcttccctgccttcttccatg
agggacttgattcgggaagactcaggtgagcggctttttcttttctggcccctggtgatg
caggctgtgagtcctgatgaccgcttcatcctcactgccgaccgggacgagaagatccga
gtcagctgggccgcggcgccccatagcatcgagtccttctgcttggggcacacagagttt
gtgagccgtatctccgtggtgccaactcagcccgggctgcttctgtcctcctctggggac
tgcgtgtggggtgtgcgtaggtgcgtgtgtgttcgcctgtgggatgaactagcacgggtg
tgtggaaggctcccttctgagggcggctgctgcatctacgatggtatcggggatcaggat
ctcaggatggctgatggaccttctggccgcttctatgtttcttctctgattgggcttcat
tcacagcctcctgttcctgctcttcaaattaacacacagccacgcgacctgagagaagaa
gaaaagtgtggccataatctccagagggacggcaccctgaggctctgggagtacaggagc
ggccgccagctgcactgctgtcacctggccagtctgcaggagctggtggacccccaggcc
ccccagaagtttgccgcgtccaggattgcattctggtgccaggagaactgcgtggcgctc
ctgtgcgacggctgcggcggcacctctatggcctccggttctgcagacctgcagggggaa
gagttagcgggttggccactggcccacgtcctcaatgaagaggtcctgaacggtggtggt
attggtctagcacctccctctgagaatgtcacttttgatgactgctgctgcatgaggagc
ggagcccgtgggcctgcagtcctagtaatcatgctctctttcttcgtggcaagcactcct
gtggtctacatcttccagctggacgcccgcagacagcagttggtgtacaggcagcagctg
gcgttccagcaccaagtgtgggacgtggctttcgaggagacccaggggctgtgggtgctc
caggactgccaggaagcccccctggtgctctacaggcctgtgggcgaccagtggcagtct
gttcctgagagcaccgtgttaaagaaagtctctggtgttcttcgtgggaactgggccatg
ctggaaggctctgccggcgcagacgccagcttcagcagtctctacaaggccacgttcgac
aacgtgacctcctacctgaagaagaaagaggagagactgcagcagcagctagagaagaag
cagcggcgccggagtcccccgcctgggcccgacgggcatgccaagaagatgagaccgggg
gaggcgacgctaagttgctga

>gi568815577f:42793334_43009018|GENSCAN_predicted_peptide_3|533_aa
MAAPCLLRQGRAGALKARMWPASVPRFPRAGPPPPLPEAQAEAGVPRADGRSRGLHAWAA
DSGGRSQTMLQEAQVFRGLASTVSLSAESGKSEKGQPQNSKKQSPPKNVVEPKERGKLLA
TQTAAELSKNLSSPSSYPPAVNKGRKVASPSPSGSVLFTDEGVPKFLSRKTLVEFPQKVL
SPFRKQGSDSEARQVGRKVTSPSSSSSSSSSDSESDDEADVSEVTPRVVSKGRGGLRKPE
ASHSFENRAPRVTVSAKEKTLLQKPHVDITDPEKPHQPKKKGSPAKPSEGRENARPKTTM
PRSQVDEEFLKQSLKEKQLQKTFRLNEIDKESQKPFEVKGPLPVHTKSGLSAPPKGSPAP
AVLAEEARAEGQLQASPPGAAEGHLEKPVPEPQRKAAPPLPRKETSGTQGIEGHLKGGQA
IVEDQIPPSNLETVPVENNHGFHEKTAALKLEAEGEAMEDAAAPGDDRGGTQDRVDEERL
VEPAPVPAEPFDNTTYKNLQHHDYSTYTFLDLNLELSKFRMPQPSSGRESPRH

>gi568815577f:42793334_43009018|GENSCAN_predicted_CDS_3|1602_bp
atggctgccccgtgtttgctgcggcaaggacgagccggggcgctgaaggcccggatgtgg
ccagcgagcgtcccgcggttcccccgagccggtccgccgccgccgctgcccgaggcccag
gccgaggctggcgtgccccgtgccgacgggcgctcccgagggctgcatgcctgggcggca
gactcgggtggacgttcccagactatgctccaggaagcccaggtgtttcgaggacttgct
tctacggtttctttgtctgcggaatcagggaagagtgaaaagggtcagccacagaattcc
aagaagcaaagtccaccaaaaaatgtagtggaaccaaaggagaggggcaagctcctagcc
acccagacagcagctgaattgtctaaaaacttatcttcacccagttcttacccgccagct
gtgaataagggcaggaaggtagctagtcccagtcccagtggcagcgtgctattcacagat
gaaggggttccgaaatttttgtcaagaaagactttggtagagtttccacagaaagttctg
tctccattcagaaaacagggctctgattcagaagctcgtcaggtgggtcggaaagtgacg
tcgccttcgtcttcatcctcttccagctcctctgattctgaatctgatgatgaggctgac
gtttcagaggtcactcctcgagtggtgagcaaaggcagaggggggcttcgaaaaccagag
gcctctcattcctttgaaaacagagccccccgagttacagtatcagcaaaagagaaaacc
ttgctgcagaagccgcatgtggacattactgatccagagaagccccaccagccaaagaag
aaagggtcccctgctaagccatcagaaggcagggaaaatgcgagaccaaaaaccacaatg
cccagatctcaagtagatgaagagtttttgaagcaaagtttaaaggaaaaacaattgcag
aaaacatttagattaaatgaaatagataaagaaagccaaaagccatttgaagttaaagga
cccttacctgtccacacaaaatcagggttgtctgcgccaccgaagggcagcccagcgcct
gctgtgttggcagaagaggccagagcagaggggcagctgcaagccagtcctcctggggcg
gcagaggggcatctggaaaaacccgtgccagagccccagcgcaaggcggcccctcccctg
cccagaaaggaaacctcagggacgcagggaatagaaggccacctgaagggtggacaggca
atcgtggaagatcagataccaccaagcaatttggagacagttcctgttgagaataaccac
ggtttccatgaaaagacagcagcgctgaagcttgaggccgagggcgaggccatggaagat
gcagccgcgccaggggacgaccgaggcggcacacaggatagggttgatgaagaacgcttg
gtagagccagccccagtgcctgctgagccgtttgacaacactacctacaagaacctgcag
catcatgactacagcacgtacaccttcttagacctcaacctcgaactctcaaaattcagg
atgcctcagccctcctcaggccgggagtcacctcgacactga

>gi568815577f:42793334_43009018|GENSCAN_predicted_peptide_4|407_aa
MGTDDPVVQEAALVALGSLQKDPAMRICGPQSVCIQVLIKTVCCSTPPRVVCWRALRVPT
NARALGLALKPARGFRPRPQWTYHPSIWESRPQQPDKGSSSASSRLSVHAHRSLISPTED
WDRIWTLAQAHADTIHHQAAAQPAGTEAVPSQDPHWDYQDGAFGCCHRDHMIVCLLAGLK
KCAHKAPSKPLIIVMKKVKGKNRQSFECLPPPSGGPAGPRGRSSTREPPSKPPAPGVCFK
CGNEGHRSRQCPNPEEKEDCQAQNLQKQGPRYVKEVRFAVLTLKQSLSSKASTTLSMSGT
NLSCNVSALSSFVLVGNLPVVYEKSPFRPHETLATPKAAFFYSPFEIMYGRTFVLEPPPL
TDSEPLRNYLPSLIQTRSFTREAAQTCLSAKLTLTKSYHRSGQAPTL

>gi568815577f:42793334_43009018|GENSCAN_predicted_CDS_4|1224_bp
atgggaacagacgacccagtggtgcaggaagctgctcttgtggccctggggagcctccag
aaggatcctgccatgcggatctgtgggcctcagtctgtctgcatccaggtgcttattaaa
acagtgtgttgctccacaccgcctcgtgttgtctgttggcgcgctctccgggttccaacc
aatgcaagagccttggggctggccctgaaacctgcgaggggcttccgtccacgtccccag
tggacctaccacccctccatctgggaaagcaggccacagcagccggacaaaggaagctcc
tcagcctctagtcgcctctctgtgcatgcacatcggtcactgatctcgcctactgaagac
tgggaccgtatctggaccctagctcaggcacatgctgatacaattcatcaccaagctgcc
gcccagcctgctggcacagaggcagtccccagccaggacccccactgggattatcaagat
ggggcctttggatgctgccatcgagaccacatgattgtgtgtctccttgcaggactcaaa
aagtgtgcccataaagcgccctcaaagcctttaataattgtgatgaagaaagtgaaaggc
aaaaacaggcagagtttcgaatgcttgcctccgccatcgggaggccctgcaggcccacgg
ggccgcagctccacacgggagcctcctagcaagccacctgcacctggcgtctgtttcaag
tgtggcaatgaaggccaccggtccaggcaatgcccaaacccagaagaaaaggaggactgc
caagcccaaaaccttcaaaaacaaggaccacggtatgtcaaggaagtgcgcttcgctgtc
ctcactctcaaacaatccctgtcctccaaagcctccacaactctttccatgtcgggtaca
aacctgtcctgcaacgtctctgccctatcctcatttgtcctcgtcggaaatctgccagtc
gtgtacgagaagtctccctttcgccctcatgagactctggcaacaccaaaggcagccttt
ttttatagtccctttgagatcatgtatggccgaacttttgtcttagagcctccaccctta
acagactctgagccactcaggaattacctcccctccttaatccagacacggtctttcact
cgtgaagcagcacagacgtgtttatcggccaaactgaccctcacaaaaagctaccaccga
agtggacaggcccctacactgtga

>gi568815577f:42793334_43009018|GENSCAN_predicted_peptide_5|190_aa
MEETKALGSLDGDSKRRLRVPDGQRLHLSQVCSDSVMRGKCQPFRPAYKLMEQPPLKISR
LGLPLRISSDNGPAFVADSTEDGKGIGDHMETACRLLVSEFRKDIRKNVTGDVNTPAILG
EVSSSPPLDIRNNITGEAIRNNITEGVYTPCDIGGNIILCPPEYYQQYQTEVVYTSCDIG
SNIILSTPGY

>gi568815577f:42793334_43009018|GENSCAN_predicted_CDS_5|573_bp
atggaagagaccaaagccttggggagcctggatggagacagcaagagaaggctccgggtc
cctgatggacaacggctgcacctgagccaggtgtgctcagacagcgtaatgcgaggcaag
tgccagccgttccgcccggcatacaagcttatggagcagccccctttgaagatctccaga
ttgggactgcccttacggatcagctcagataacgggcctgcgtttgtggctgacagtaca
gaagatggcaaaggtatcggggatcacatggaaaccgcatgccgcctcctggtctcagag
ttccggaaagatattaggaaaaatgtaactggggatgtgaacacccctgcgatattggga
gaagtatcatcctctcccccgttggatattaggaacaatatcacaggggaggccattagg
aacaatatcacagagggtgtttacacaccctgcgatattggaggtaatatcatcctctgc
cccccggaatattaccaacaatatcaaacagaggttgtgtacacttcctgtgatattggg
agtaatatcattctctccacccccggatattaa

>gi568815577f:42793334_43009018|GENSCAN_predicted_peptide_6|159_aa
MAAATPAPASAVASGWVGVLGASSLVTASVNPPVTLLVAKNHFIMWTNSVDQEYGEEVAV
SPPGCLSPQLGRLSGWGAAQTLNVCDLHQQQQGHAGRGPARLLSPTLQCFSTPMLQMQVV
TELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYR

>gi568815577f:42793334_43009018|GENSCAN_predicted_CDS_6|480_bp
atggcggccgcgaccccggccccggcctcggccgtggcgagcgggtgggtcggggtcctg
ggggcgagtagtctggtcacagctagtgtgaaccccccggtcacactgttagtggcaaaa
aaccattttattatgtggacaaattctgtggaccaggaatatggagaggaagtggccgtc
tctcctccaggatgtctgagtcctcagctgggacgactcagcggctggggggcagcccag
actctaaatgtctgtgacctgcaccagcagcagcaaggccatgccggccgtggtccagcc
cggctgctctcccccactctgcagtgtttttccacacccatgctgcagatgcaagtagta
acagagttaaagacagaacaagatccaaactgctctgaacccgatgcagaaggagtgagc
cctccccctgtggagtctcagaccccgatggatgtggacaagcaggccatttataggtag