Result of FASTA (omim) for pF1KE2560
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2560, 209 aa
  1>>>pF1KE2560     209 - 209 aa - 209 aa
Library: /omim/omim.rfq.tfa
  64092750 residues in 91774 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8495+/-0.00028; mu= 16.2396+/- 0.018
 mean_var=56.2093+/-11.197, 0's: 0 Z-trim(117.8): 24  B-trim: 1393 in 1/51
 Lambda= 0.171069
 statistics sampled from 31279 (31298) to 31279 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.727), E-opt: 0.2 (0.341), width:  16
 Scan time:  4.210

The best scores are:                                      opt bits E(91774)
NP_003174 (OMIM: 603639,614328) disintegrin and me ( 824) 1365 344.6 2.9e-94
XP_011508677 (OMIM: 603639,614328) disintegrin and ( 793) 1135 287.8 3.4e-77
NP_001307499 (OMIM: 602192,615537,615590) disinteg ( 717)  166 48.7 3.1e-05
NP_001101 (OMIM: 602192,615537,615590) disintegrin ( 748)  166 48.7 3.2e-05


>>NP_003174 (OMIM: 603639,614328) disintegrin and metall  (824 aa)
 initn: 1365 init1: 1365 opt: 1365  Z-score: 1814.0  bits: 344.6 E(91774): 2.9e-94
Smith-Waterman score: 1365; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)

               10        20        30        40        50        60
pF1KE2 MRQSLLFLTSVVPFVLAPRPPDDPGFGPHQRLEKLDSLLSDYDILSLSNIQQHSVRKRDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MRQSLLFLTSVVPFVLAPRPPDDPGFGPHQRLEKLDSLLSDYDILSLSNIQQHSVRKRDL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 QTSTHVETLLTFSALKRHFKLYLTSSTERFSQNFKVVVVDGKNESEYTVKWQDFFTGHVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QTSTHVETLLTFSALKRHFKLYLTSSTERFSQNFKVVVVDGKNESEYTVKWQDFFTGHVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 GEPDSRVLAHIRDDDVIIRINTDGAEYNIEPLWRFVNDTKDKRMLVYKSEDIKNVSRLQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GEPDSRVLAHIRDDDVIIRINTDGAEYNIEPLWRFVNDTKDKRMLVYKSEDIKNVSRLQS
              130       140       150       160       170       180

              190       200                                        
pF1KE2 PKVCGYLKVDNEELLPKGLVDREPPEGKT                               
       ::::::::::::::::::::::::::                                  
NP_003 PKVCGYLKVDNEELLPKGLVDREPPEELVHRVKRRADPDPMKNTCKLLVVADHRFYRYMG
              190       200       210       220       230       240

>>XP_011508677 (OMIM: 603639,614328) disintegrin and met  (793 aa)
 initn: 1135 init1: 1135 opt: 1135  Z-score: 1507.4  bits: 287.8 E(91774): 3.4e-77
Smith-Waterman score: 1135; 98.9% identity (100.0% similar) in 175 aa overlap (32-206:1-175)

              10        20        30        40        50        60 
pF1KE2 RQSLLFLTSVVPFVLAPRPPDDPGFGPHQRLEKLDSLLSDYDILSLSNIQQHSVRKRDLQ
                                     ..::::::::::::::::::::::::::::
XP_011                               MKKLDSLLSDYDILSLSNIQQHSVRKRDLQ
                                             10        20        30

              70        80        90       100       110       120 
pF1KE2 TSTHVETLLTFSALKRHFKLYLTSSTERFSQNFKVVVVDGKNESEYTVKWQDFFTGHVVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSTHVETLLTFSALKRHFKLYLTSSTERFSQNFKVVVVDGKNESEYTVKWQDFFTGHVVG
               40        50        60        70        80        90

             130       140       150       160       170       180 
pF1KE2 EPDSRVLAHIRDDDVIIRINTDGAEYNIEPLWRFVNDTKDKRMLVYKSEDIKNVSRLQSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPDSRVLAHIRDDDVIIRINTDGAEYNIEPLWRFVNDTKDKRMLVYKSEDIKNVSRLQSP
              100       110       120       130       140       150

             190       200                                         
pF1KE2 KVCGYLKVDNEELLPKGLVDREPPEGKT                                
       :::::::::::::::::::::::::                                   
XP_011 KVCGYLKVDNEELLPKGLVDREPPEELVHRVKRRADPDPMKNTCKLLVVADHRFYRYMGR
              160       170       180       190       200       210

>>NP_001307499 (OMIM: 602192,615537,615590) disintegrin   (717 aa)
 initn: 162 init1:  87 opt: 166  Z-score: 215.6  bits: 48.7 E(91774): 3.1e-05
Smith-Waterman score: 166; 27.8% identity (56.8% similar) in 162 aa overlap (25-182:16-170)

               10        20        30        40        50        60
pF1KE2 MRQSLLFLTSVVPFVLAPRPPDDPGFGPHQRLEKLDSLLSDYDILSLSNIQQHSVRKRDL
                               :.:  :  . :.. .  :. :: .  . :. ..:  
NP_001          MVLLRVLILLLSWAAGMGG-QYGNPLNKYIRHYEGLSYNVDSLHQKHQRAK
                        10         20        30        40        50

               70          80        90       100        110       
pF1KE2 QTSTHVETLLT--FSALKRHFKLYLTSSTERFSQNFKVVVVDGKNES-EYTVKWQDFFTG
       .. .: . .:   : :  :::.: .  .:  ::..::   :. .:.  .: ..   ..::
NP_001 RAVSHEDQFLRLDFHAHGRHFNLRMKRDTSLFSDEFK---VETSNKVLDYDTS--HIYTG
               60        70        80           90       100       

       120       130       140       150        160       170      
pF1KE2 HVVGEPDSRVLAHIRDDDVIIRINTDGAEYNIEPLWRFVND-TKDKRMLVYKSEDIKNVS
       :. ::  :   . . :      :.: :. . .::  :...: :   . ..:. .:: :  
NP_001 HIYGEEGSFSHGSVIDGRFEGFIQTRGGTFYVEPAERYIKDRTLPFHSVIYHEDDI-NYP
         110       120       130       140       150       160     

        180       190       200                                    
pF1KE2 RLQSPKVCGYLKVDNEELLPKGLVDREPPEGKT                           
       .  .:.                                                      
NP_001 HKYGPQGGCADHSVFERMRKYQMTGVEEVTQIPQEEHAANGPELLRKKRTTSAEKNTCQL
          170       180       190       200       210       220    

>>NP_001101 (OMIM: 602192,615537,615590) disintegrin and  (748 aa)
 initn: 162 init1:  87 opt: 166  Z-score: 215.3  bits: 48.7 E(91774): 3.2e-05
Smith-Waterman score: 166; 27.8% identity (56.8% similar) in 162 aa overlap (25-182:16-170)

               10        20        30        40        50        60
pF1KE2 MRQSLLFLTSVVPFVLAPRPPDDPGFGPHQRLEKLDSLLSDYDILSLSNIQQHSVRKRDL
                               :.:  :  . :.. .  :. :: .  . :. ..:  
NP_001          MVLLRVLILLLSWAAGMGG-QYGNPLNKYIRHYEGLSYNVDSLHQKHQRAK
                        10         20        30        40        50

               70          80        90       100        110       
pF1KE2 QTSTHVETLLT--FSALKRHFKLYLTSSTERFSQNFKVVVVDGKNES-EYTVKWQDFFTG
       .. .: . .:   : :  :::.: .  .:  ::..::   :. .:.  .: ..   ..::
NP_001 RAVSHEDQFLRLDFHAHGRHFNLRMKRDTSLFSDEFK---VETSNKVLDYDTS--HIYTG
               60        70        80           90       100       

       120       130       140       150        160       170      
pF1KE2 HVVGEPDSRVLAHIRDDDVIIRINTDGAEYNIEPLWRFVND-TKDKRMLVYKSEDIKNVS
       :. ::  :   . . :      :.: :. . .::  :...: :   . ..:. .:: :  
NP_001 HIYGEEGSFSHGSVIDGRFEGFIQTRGGTFYVEPAERYIKDRTLPFHSVIYHEDDI-NYP
         110       120       130       140       150       160     

        180       190       200                                    
pF1KE2 RLQSPKVCGYLKVDNEELLPKGLVDREPPEGKT                           
       .  .:.                                                      
NP_001 HKYGPQGGCADHSVFERMRKYQMTGVEEVTQIPQEEHAANGPELLRKKRTTSAEKNTCQL
          170       180       190       200       210       220    




209 residues in 1 query   sequences
64092750 residues in 91774 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Jul 16 16:01:02 2019 done: Tue Jul 16 16:01:03 2019
 Total Scan time:  4.210 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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