GENSCAN 1.0	Date run:  3-Oct-119	Time: 17:24:40

Sequence gi568815582r:74614193_74816623 : 202431 bp : 45.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -    320    315    6                               1.05
 1.11 Term -   9879   9736  144  0  0  129   42   152 0.993  12.61
 1.10 Intr -  12362  12151  212  0  2   93   93   138 0.979  13.43
 1.09 Intr -  14474  14260  215  1  2   72  119     3 0.571   0.16
 1.08 Intr -  16765  16589  177  0  0   62   91   100 0.980   6.73
 1.07 Intr -  18481  18331  151  2  1  104  109    95 0.998  12.42
 1.06 Intr -  22385  22154  232  2  1   67  103    53 0.532   2.05
 1.05 Intr -  23778  23664  115  2  1   98   98    39 0.877   6.35
 1.04 Intr -  30261  30170   92  0  2   65  100   113 0.999   8.99
 1.03 Intr -  30543  30349  195  0  0   72  110   130 0.854  13.21
 1.02 Intr -  37930  37711  220  0  1   86   36    95 0.236   2.40
 1.01 Init -  47257  46740  518  1  2   68   99   192 0.427  12.66
 1.00 Prom -  48090  48051   40                              -3.06

 2.00 Prom +  49372  49411   40                              -7.66
 2.01 Init +  51417  51471   55  2  1   59   59    70 0.307   0.65
 2.02 Term +  53312  53577  266  0  2   17   33   245 0.969   7.57
 2.03 PlyA +  54627  54632    6                               1.05

 3.12 PlyA -  54682  54677    6                               1.05
 3.11 Term -  58764  58733   32  1  2   79   48    38 0.397  -3.08
 3.10 Intr -  60908  60768  141  0  0   62   54   253 0.574  19.62
 3.09 Intr -  62478  62343  136  0  1   92   58   -16 0.278  -4.06
 3.08 Intr -  64788  64707   82  2  1   61  113    44 0.142   3.84
 3.07 Intr -  68594  68459  136  0  1   69  111    52 0.368   5.23
 3.06 Intr -  71391  71294   98  2  2   92  110    87 0.948  10.95
 3.05 Intr -  77276  77085  192  1  0  -22   85   145 0.308   1.81
 3.04 Intr -  81529  81090  440  1  2   27   36   439 0.097  24.91
 3.03 Intr -  81940  81860   81  1  0   75   42   108 0.203   4.73
 3.02 Intr -  86490  86261  230  1  2   53  105    73 0.230   3.09
 3.01 Init -  94347  94287   61  0  1   76   69    75 0.486   5.81
 3.00 Prom -  96908  96869   40                              -6.76

 4.11 PlyA -  96974  96969    6                               1.05
 4.10 Term -  99813  99683  131  1  2   58   49   128 0.932   4.24
 4.09 Intr - 102407 102155  253  2  1  104   94   430 0.743  42.21
 4.08 Intr - 104968 104796  173  2  2   96  105   316 0.991  33.76
 4.07 Intr - 112139 112033  107  1  2   94   95   146 0.861  15.76
 4.06 Intr - 113194 113052  143  1  2   97   93   175 0.977  18.05
 4.05 Intr - 115705 115519  187  0  1   81  -10   147 0.083   3.89
 4.04 Intr - 123105 123095   11  0  2  113   94     6 0.036  -3.24
 4.03 Intr - 125923 125831   93  1  0  120   77    83 0.087  10.56
 4.02 Intr - 153861 153766   96  0  0   44   49    91 0.254   1.01
 4.01 Init - 160563 160294  270  0  0  103   92   490 0.993  45.87
 4.00 Prom - 164944 164905   40                              -3.16

 5.00 Prom + 192440 192479   40                              -4.56
 5.01 Sngl + 192926 193285  360  1  0   49   42   172 0.672   4.98
 5.02 PlyA + 194221 194226    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 114482 114417   66  2  0   66   37    95 0.829   3.27
S.002 Intr + 135190 135309  120  2  0  103   89    92 0.979  11.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:74614193_74816623|GENSCAN_predicted_peptide_1|756_aa
MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV
ISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSM
TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA
YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE
GQYFTQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDHRLSALRCGHLFGYRCIST
WLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKSSLLKEQMLRKQAELESAQ
CRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAWVLSCSPSSQGQHKHKYHF
QKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVKMLSTANMKSSQYIPMHGK
QIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGRPVWSCCWCLDEANYIYAG
LANGSILVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASAAFPYGGVLAGTLEDASFW
EQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNHTTIRSVLMEMSYRLDDTG
NPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGDEAANSALLWDAASGSLLQ
DLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE

>gi568815582r:74614193_74816623|GENSCAN_predicted_CDS_1|2271_bp
atggctcatgaagcaatggaatatgatgttcaggtgcagttaaatcatgccgaacaacag
ccagctcctgctggcatggccagcagccaagggggaccagccctcctccagcctgttcct
gctgatgtggtcagcagccagggggtaccatccatcctccagccagctcctgctgaggtg
atcagcagccaagcgacaccacccctgctccagcctgctccgcaactgtctgttgacctg
acagaagtggaggtcttgggagaagacactgtggagaacatcaatccaagaacttcagaa
caacataggcagggatctgatggtaatcacaccatcccagcatcttcgttgcattcaatg
accaacttcatcagcggactgcagagacttcatggcatgctggaattcctgagaccttca
tcttcaaaccacagtgtagggccaatgagaacaagaaggagggtatctgcttcacggagg
gcaagagccggagggtctcagaggacagacagtgccaggttgagagcaccattggatgct
tactttcaggtgagcaggacccagcctgacttgccagctaccacttatgattcagagact
aggaatcctgtatctgaagagttgcaggtgtctagtagttctgattctgacagtgacagc
tctgcagagtatggaggggttgttgaccaggcagaggaatctggagctgtcattttagaa
ggtcagtattttacccagccatctccccagaagtctgagcctctgctaccttctgcttct
atggatgaggaagaaggggacacttgtacaatatgtctggaacagtggaccaatgctggg
gaccaccggctctcagcattacgctgtgggcatctctttgggtataggtgcatttccacg
tggcttaaaggacaagtacgaaaatgtccccagtgcaacaagaaagccaggcacagtgac
attgtcgtcctttatgcccgaaccctgagagctttggacactagtgaacaggagcgcatg
aaaagttccctactgaaggaacagatgctaaggaaacaggccgagttagaatcagcacag
tgccgactccaactgcaggtcctcactgataagtgcactaggcttcaaaggcgtgttcag
gacttgcaaaaacttacgtcacatcaaagtcagaatttacagcaacccaggggctcccaa
gcatgggtcctgagctgctcaccctccagccagggccagcacaagcacaagtaccacttc
caaaagaccttcacagtatctcaggcaggaaactgccggatcatggcatactgtgatgct
ctgagctgcctggtgatatcacagccttctcctcaggcctcttttcttccaggctttggt
gttaagatgttgagtactgccaacatgaagagcagtcagtacattccgatgcatggcaaa
cagatccgtggactggcgtttagcagttacctcagaggcttgctactctctgcttcccta
gacaacactattaaactgaccagcctggagacaaataccgtggtccagacttataatgct
ggacgtcctgtctggagctgttgctggtgtcttgatgaggctaactacatctatgctgga
ctggccaatggttcaattctggtatatgacgtgcgaaacacgagcagtcatgtgcaggag
ttagtagctcagaaagccagatgcccactggtctccctgtcatacatgcccagagctgcc
tcagctgcatttccatatggtggggtgctggctggaaccttggaggatgcttcattctgg
gaacagaaaatggacttttctcattggcctcatgtgctgcccttggagccagggggctgc
atagactttcagacagagaacagctcccggcactgtcttgtgacctacaggcctgataaa
aatcacaccaccatacgaagtgtgctgatggaaatgtcctaccgactggatgacactgga
aatccaatctgctcctgccagcctgtacatacattttttggaggacctacttgcaaacta
ttgaccaaaaatgccattttccaaagcccagagaatgatggcaacatcctggtgtgtact
ggggatgaagcagcaaattctgccctgctgtgggatgctgccagtggctcgttgctccag
gacctacagaccgatcagcctgtgttggacatctgcccatttgaggtgaaccgtaacagc
tacttggctaccttaacagagaagatggtccacatctataagtgggagtga

>gi568815582r:74614193_74816623|GENSCAN_predicted_peptide_2|106_aa
MSRAWWRAPVVPAIAGSRGPPLAASAKRKGPPEFSSYVRGARAHSRLGSEPAAGRKATKK
TDKPRQDDKDDLDVTELTNEDPLDQLVKYGVNCGPIVGTTRKLYEK

>gi568815582r:74614193_74816623|GENSCAN_predicted_CDS_2|321_bp
atgagccgggcgtggtggcgcgcacctgtggtcccagctattgcgggaagccgagggccg
ccgctcgccgccagcgccaaaagaaaggggcccccggaattctccagctacgtacgagga
gcgcgagcccacagccgtctcggctccgagcccgccgccggcaggaaagccacaaagaaa
actgataaacccagacaagatgataaagacgatctagatgtaacagaactcactaatgaa
gatcctttggatcagcttgtgaaatacggagtgaattgtggtcctattgtgggaacaacc
aggaagctgtatgagaaatag

>gi568815582r:74614193_74816623|GENSCAN_predicted_peptide_3|542_aa
MQAKQMLALAKVLGQKQEHRGRDRGALSPPATCGVRYSQQSAGCGHQERGRRGTPAGLAF
ANFSPGQEAVVGKKVEERAFWNCARDRLDAHPSGGAKGRFTPRIQPTKGECEEAAQLPQS
EVEQVIHKRCEEMKYCKKQCRRLGHRVLGLIKPLEMLQDQGKRSVPSEKLTTAMNRFKAA
LEEANGEIEKFSNRSNICRFLTASQDKILFKDVNRKLSDVWKELSLLLQVEQRMPVSPIS
QGASWAQEDQQDADEDRRAFQMLRRGKLGLWSDLPPKCMQEIPQEQIKEIKKEQLSGSPW
ILLRENEVSTLYKGEYHRAPVAIKVFKKLQAGSIAIVRQTFNKEIKTMKKFESPNILRIF
GICIDETVTPPQFSIVMEYCELGTLRELLDREKDLTLGKRMVLVLGAARGLYRLHHSEAP
ELHGKIRSSNFLVTQGYQVKMPFPLCDGDISTPKTLFLLLSRSSCSLTIRCAIPPFIPGI
PYGARCCNSEKIRKLVAVKRQQEPLGEDCPSELREIIDECRAHDPSVRPSVDEQKRRLND
VF

>gi568815582r:74614193_74816623|GENSCAN_predicted_CDS_3|1629_bp
atgcaagccaagcagatgctggctttggcaaaagtccttggacaaaagcaggaacataga
ggtagggatcggggcgccttgtcgccgccagccacgtgtggcgtccggtacagtcagcag
agtgcagggtgcgggcaccaggaaagggggcgcaggggaactcccgcgggcctcgcgttt
gcaaacttctcgcctgggcaggaggcggtcgtgggaaagaaggtggaagagcgagctttt
tggaactgtgcacgggacagattggacgcacacccctcgggaggcgcgaagggccgcttc
accccacgcatccagccaaccaagggagagtgtgaggaggcggcacagctgccccagtcc
gaagtagagcaggtcatccacaaacggtgtgaagagatgaaatactgcaagaaacagtgc
cggcgcctgggccaccgcgtcctcggcctgatcaagcctctggagatgctccaggaccaa
ggaaagaggagcgtgccctctgagaagttaaccacagccatgaaccgcttcaaggctgcc
ctggaggaggctaatggggagatagaaaagttcagcaatagatccaatatctgcaggttt
ctaacagcaagccaggacaaaatactcttcaaggacgtgaacaggaagctgagtgatgtc
tggaaggagctctcgctgttacttcaggttgagcaacgcatgcctgtttcacccataagc
caaggagcgtcctgggcacaggaagatcagcaggatgcagacgaagacaggcgagctttc
cagatgctaagaagaggcaagctgggtctttggtcagatttaccaccaaaatgcatgcag
gagatcccgcaagagcaaatcaaggagatcaagaaggagcagctttcaggatccccgtgg
attctgctaagggaaaatgaagtcagcacactttataaaggagaataccacagagctcca
gtggccataaaagtattcaaaaaactccaggctggcagcattgcaatagtgaggcagact
ttcaataaggagatcaaaaccatgaagaaattcgaatctcccaacatcctgcgtatattt
gggatttgcattgatgaaacagtgactccgcctcaattctccattgtcatggagtactgt
gaactcgggaccctgagggagctgttggatagggaaaaagacctcacacttggcaagcgc
atggtcctagtcctgggggcagcccgaggcctataccggctacaccattcagaagcacct
gaactccacggaaaaatcagaagctcaaacttcctggtaactcaaggctaccaagtgaag
atgcctttccccctctgcgatggtgatataagtactcccaaaacactgtttctactactc
tcacgctcttcatgcagcctgactataagatgcgctattccacctttcatccctggtatc
ccatacggcgctagatgctgtaattctgagaagatccgcaagctggtggctgtgaagcgg
cagcaggagccactgggtgaagactgcccttcagagctgcgggagatcattgatgagtgc
cgggcccatgatccctctgtgcggccctctgtggatgagcagaagcgcagacttaatgat
gtgttctga

>gi568815582r:74614193_74816623|GENSCAN_predicted_peptide_4|487_aa
MAPAPPPAASFSPSEVQRRLAAGACWVRRGARLYDLSSFVRHHPGGEQLLRARAGQDISA
DLDGPPHRHSANARRWLEQYYVGELRGEQQTGDKHPMRSETHHITETALAGVTRTFAFLH
PVGSMENEPVALEETQKTDPAMEPRFKVVDWDKNTASGCLTPRAEDWLSIHRDTLILTPI
VCGRLGPTSITDEGTEGLREEKMHVQDLTAGQRHSQALMDLVDWRKPLLWQVGHLGEKYD
EWVHQPVTRPIRLFHSDLIEGLSKTVWYSVPIIWVPLVLYLSWSYYRTFAQGNVRLFTSF
TTEYTVAVPKSMFPGLFMLGTFLWSLIEYLIHRFLFHMKPPSDSYYLIMLHFVMHGQHHK
APFDGSRLVFPPVPASLVIGVFYLCMQLILPEAVGGTVFAGGLLGYVLYDMTHYYLHFGS
PHKGSYLYSLKAHHVKHHFAHQKSGGSHPLGGQVALGDPLLPGASLPRAQPTGLLQAVAT
GSSRKGK

>gi568815582r:74614193_74816623|GENSCAN_predicted_CDS_4|1464_bp
atggcccccgctccgccccccgccgcctccttctcgccctccgaggtccagcggcgcctg
gcggccggcgcgtgctgggtccgccgcggggcccgcctctacgacctctccagcttcgtg
cggcaccacccggggggcgagcagctgctgcgggccagggcgggccaggacatcagcgcc
gacctggacgggccgccgcacaggcactcggccaacgcgcgccgctggctggagcagtac
tacgtgggagagctccgcggggagcagcagacaggtgataagcatcccatgcgctctgaa
acccaccacatcacagaaacagcccttgctggcgttaccaggaccttcgccttcctccac
ccggtgggctccatggagaacgagcctgtagcccttgaggaaactcagaagacagatcct
gctatggaaccacggttcaaagtggtggattgggacaagaacacagccagtggctgcctg
actccccgtgctgaagattggctgagcatccaccgagacaccctcatcctcactccgatt
gtgtgtggcagattggggcccaccagcatcacagatgagggcactgaggggctccgggag
gaaaagatgcacgtccaggatctcacagctggtcaaaggcacagccaggctctaatggac
ctggtggactggcgaaagcctctcctgtggcaggtgggccacttgggagagaagtacgat
gagtgggttcaccagccggtgaccaggcccatccgcctcttccactcagacctcattgag
ggcctctctaagactgtctggtacagtgtccccatcatctgggtgcccctggtgctgtat
ctcagctggtcctactaccgaacctttgcccagggcaacgtccgactcttcacgtcattt
acaacagagtacacggtggcagtgcccaagtccatgttccccgggctcttcatgctgggg
acattcctctggagcctcatcgagtacctcatccaccgcttcctgttccacatgaagccc
cccagcgacagctattacctcatcatgctgcacttcgtcatgcacggccagcaccacaag
gcacccttcgacggctcccgcctggtcttcccccctgtgccagcctccctggtgatcggc
gtcttctacttgtgcatgcagctcatcctgcccgaggcagtagggggcactgtgtttgcg
gggggcctcctgggctacgtcctctatgacatgacccattactacctgcactttggctcg
ccgcacaagggctcctacctgtacagcctgaaggcccaccacgtcaagcaccactttgca
catcagaagtcaggagggtcacatccacttggtggccaggtggcccttggtgacccactt
cttcctggagcgtccctgcctagagctcagcccacaggactgcttcaggccgtggccaca
ggtagcagccgcaaggggaaatga

>gi568815582r:74614193_74816623|GENSCAN_predicted_peptide_5|119_aa
MECSAVSKEEALEGVALLCPLVILLSAVLSREEALKRVAPLCRQVVQMSLQASEALSKED
SSSLQVVIPFLSLSSGLCPAVAEPRAFMDLSGEEMHANWWMRSHGQAQRRRFKSLLWSV

>gi568815582r:74614193_74816623|GENSCAN_predicted_CDS_5|360_bp
atggagtgttcagctgtcagcaaagaggaggccctggagggggtagctcttctctgccca
ctggtcatcctgctgtctgctgttctcagcagagaggaggctctgaagagggtggctcct
ctttgtaggcaggttgttcagatgtctctgcaggcctctgaagctctcagcaaagaggat
agctcctctctgcaggtagttatccccttcctctctctgtcctctggtctttgccctgct
gtggccgagcccagggcttttatggacctgagcggggaggaaatgcatgccaattggtgg
atgcgcagccatgggcaggcccagaggaggcgcttcaagtccctactctggtctgtgtga